| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is maeB [H]
Identifier: 84622672
GI number: 84622672
Start: 1112022
End: 1114331
Strand: Direct
Name: maeB [H]
Synonym: XOO_1015
Alternate gene names: 84622672
Gene position: 1112022-1114331 (Clockwise)
Preceding gene: 84622671
Following gene: 84622673
Centisome position: 22.51
GC content: 65.24
Gene sequence:
>2310_bases ATGTCCACCGACGACTTCAAACAGGCCGCCCTCGACTATCACCGCCAGCAGCCGGCGGGCAAGATCAAGGTCACCGCGAC CAAGCCGATGCTGACCCAGCGCGATCTGTCGCTGGCGTATTCGCCGGGCGTGGCCTTCGCCTGCGAGGCCATCGTCGACG ATGCCACCCAGGCCAGCGAGCTCACCGCGCGCGGCAATCTGGTGGCGGTCATCACCAACGGCACCGCGGTGCTGGGCCTG GGCAACATCGGTCCGCTGGCCTCCAAGCCGGTGATGGAAGGCAAGGGCGTGCTGTTCCAGAAGTTCGCCGGCATCGACGT GTTCGATATCGAAATCAGCGAGAACGACCCGGACAAGCTGGTCGATATCATCGCCAGCCTGGAGCCCACCTTCGGCGGCA TCAATCTGGAAGACATCAAGGCGCCTGAGTGCTTCATCGTCGAGCGCAAGCTGCGCGAGCGCATGAACATCCCGGTGTTC CATGACGACCAGCACGGCACCGCGATCATCGTCGGCGCTGCCGTGCTCAACGCGCTGGTGGTCACTGGCAAGAAGATCGA GGAGGTCAAGCTGGCCACCACCGGCATGGGCGCGGCGGGCATTTCCTGCGTCAACATGCTGGTCTCGCTGGGCCTGAAGC CGGAGAACATCCTGGCGCTGGACCGTGACGGCGTGATCCACACCGGCCGCACCGACCTGGACCCGGACAAGCAGCGCTAT GCGCGCGACACCGACAAGCGCACCCTGGCCGAGATCGTCGAAGGCGCGGATATCTTCCTGGGCCTGTCGGCGGCCGGCAT CCTCAAGCCGGAGATGGTCGCCAGCATGGCGCGCCAGCCGGTGATCTTCGCGCTGGCCAATCCCAACCCGGAAATCACCC CGGAAGCGGCCAAGGCGGTGCGCCCGGATTGCATCATCGGCACCGGCCGTTCGGACTATCCGAACCAGATCAACAACGTG CTGTGCTTCCCGTATCTGTTCCGTGGCGCGCTGGACGTGGGCGCCACCGGCATCAATGAGGAAATGAAGATCGCCTGCGT CAAGGCGATCGCCGCGATGGCGCGGCGCGAGGCCTCCGACCTGGGCGCAGCCTACGGCGGCGAGACCCCGAGCTTCGGCC CGGAATACCTGATTCCGCGTCCGCTCGACCCGCGTCTGCTGGTGGAGTTGTCGTCTGCGGTTGCGCAGGCGGCGATGGAT TCGGGCGTGGCCACGCGCCCGATCACCGACATGGAGGCCTACCGCGACAAGCTCGGCCAGTTCGTCTACCGCACCAGCCT GATGATGAAGCCGGTCTACGACCGTGCGCGCGCCGACAAGCAGCGCGTGGTGTATGCCGAAGGCGAAGAAGAAGTGGTGC TGCGCGCGGTGCAGAACGTGGTCGACGAAGGCCTGGCCTTCCCGATCCTGATCGGCCGCCCTGACGTCATCGAAGCGCGT ATCGAGCGCATGGGCCTGCGCCTGACCGCCGGCGTGGACTTCGAGATCACCAACATCCTCGACGACCCCCGCTTCAACGA TTACTGGCAGTACTACCACGCGCTCACCGAGCGCCGCGGCGTGACCGTCACCGCGGCCAAGGAACTGATGCGCTCGCGTC CAACCCTGATCGCGGCGGTCATGGTGGCGCGCGGCGAAGCCGACGCGATGCTGTCCGGCGTGGTCGGCCGCTTCCACAAG AAGCTGGGCTATGCGCGCAGCGTGATTCCGCTGGAACCGCGGGTGAGTTCCACCTCGGCGATGACCGGCGTGATCAACCA GCTCGGCGTGTTCTTCTTCCTGGACACGCACGTGCAGGAAGACCCCACCGTGGAGCAGGTGGTGGAAGCCACGTTGCAGG CCGCGTATCGCCTCAAGCTGTTCGGCATCGAGCCCAATATCGCGTTGCTGTCGCATTCCAACTTCGGCAGCCACGACTCG CGCGATGCGCTGAAGATGCGCCAGGTGCGCGAAGCACTGCTCAAGCGCAAGCCCGAGCTCAACATCGACGGCGAAATGCA GGGCGATACCGCCTGGGACGAAGCGCTGCGCAAGCAGATCATGCCCAACAGCACCTTGAAGGGTCGCGCCAACCTGTTCG TGCTGCCGAACCTGGAAGCGGCCAACATCGCCTACAACCTGGTGCGCGTGTTCACCGATGGCGTGGCGATCGGCCCGATC CTGATGGGCATCTCCAAGCCGGTGCATATCCTCACCACCAGCGCCACCTCGCGCCGGGTGATGAACATGACCGCGATTGC CGCAGTGGATGCACAGATCCGCAAGCTGCTGGAAGCCGAGAAGGGCGGGGCAGACAAGAGCAACGACTGA
Upstream 100 bases:
>100_bases CATGCGATCTCCCTGCCGCGCTGACAGCTGCGCGACAGGCCCTTGTTCAGGCAGGAGGGTAGAATTCAGTTCTCCTGCGC CTTCGAGACACACACAGCCG
Downstream 100 bases:
>100_bases GGGGCTTGGCGGCACGGTAGCGCCGTCGGATGCTGTGCCCTCTCGCTCAGCGGGAGGGCGGCGGATTCATCGGCGCCAGG TGTTCGGCCGTTTGAGCCTG
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MSTDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVDDATQASELTARGNLVAVITNGTAVLGL GNIGPLASKPVMEGKGVLFQKFAGIDVFDIEISENDPDKLVDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVF HDDQHGTAIIVGAAVLNALVVTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEAAKAVRPDCIIGTGRSDYPNQINNV LCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASDLGAAYGGETPSFGPEYLIPRPLDPRLLVELSSAVAQAAMD SGVATRPITDMEAYRDKLGQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAVMVARGEADAMLSGVVGRFHK KLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQEDPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDS RDALKMRQVREALLKRKPELNIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRKLLEAEKGGADKSND
Sequences:
>Translated_769_residues MSTDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVDDATQASELTARGNLVAVITNGTAVLGL GNIGPLASKPVMEGKGVLFQKFAGIDVFDIEISENDPDKLVDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVF HDDQHGTAIIVGAAVLNALVVTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEAAKAVRPDCIIGTGRSDYPNQINNV LCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASDLGAAYGGETPSFGPEYLIPRPLDPRLLVELSSAVAQAAMD SGVATRPITDMEAYRDKLGQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAVMVARGEADAMLSGVVGRFHK KLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQEDPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDS RDALKMRQVREALLKRKPELNIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRKLLEAEKGGADKSND >Mature_768_residues STDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVDDATQASELTARGNLVAVITNGTAVLGLG NIGPLASKPVMEGKGVLFQKFAGIDVFDIEISENDPDKLVDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVFH DDQHGTAIIVGAAVLNALVVTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRYA RDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEAAKAVRPDCIIGTGRSDYPNQINNVL CFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASDLGAAYGGETPSFGPEYLIPRPLDPRLLVELSSAVAQAAMDS GVATRPITDMEAYRDKLGQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEARI ERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAVMVARGEADAMLSGVVGRFHKK LGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQEDPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDSR DALKMRQVREALLKRKPELNIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPIL MGISKPVHILTTSATSRRVMNMTAIAAVDAQIRKLLEAEKGGADKSND
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=411, Percent_Identity=24.5742092457421, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI62420880, Length=411, Percent_Identity=24.5742092457421, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI239049447, Length=411, Percent_Identity=24.5742092457421, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI4505143, Length=409, Percent_Identity=23.4718826405868, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1788806, Length=757, Percent_Identity=58.9167767503302, Blast_Score=902, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=318, Percent_Identity=29.559748427673, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI1788800, Length=316, Percent_Identity=29.4303797468354, Blast_Score=132, Evalue=8e-32, Organism=Escherichia coli, GI87081919, Length=240, Percent_Identity=25.4166666666667, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17537199, Length=345, Percent_Identity=28.4057971014493, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI281362674, Length=490, Percent_Identity=26.1224489795918, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI281362672, Length=490, Percent_Identity=26.530612244898, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI21356279, Length=490, Percent_Identity=26.1224489795918, Blast_Score=87, Evalue=5e-17, Organism=Drosophila melanogaster, GI78707242, Length=354, Percent_Identity=25.7062146892655, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI78707238, Length=354, Percent_Identity=25.7062146892655, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI78707240, Length=354, Percent_Identity=25.7062146892655, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83580; Mature: 83449
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVDDATQASE CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCHHHHH LTARGNLVAVITNGTAVLGLGNIGPLASKPVMEGKGVLFQKFAGIDVFDIEISENDPDKL HEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCHHHH VDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVFHDDQHGTAIIVGAAVLNALV HHHHHHCCCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH VTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY HCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCCCCCHHHH ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEAAKAV HCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHC RPDCIIGTGRSDYPNQINNVLCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASD CCCEEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGAAYGGETPSFGPEYLIPRPLDPRLLVELSSAVAQAAMDSGVATRPITDMEAYRDKLGQ HCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAV HHHCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH MVARGEADAMLSGVVGRFHKKLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQE HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCC DPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDSRDALKMRQVREALLKRKPEL CCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC NIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRKLLEAEKGGADKSND HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure STDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVDDATQASE CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCHHHHH LTARGNLVAVITNGTAVLGLGNIGPLASKPVMEGKGVLFQKFAGIDVFDIEISENDPDKL HEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCHHHH VDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVFHDDQHGTAIIVGAAVLNALV HHHHHHCCCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH VTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY HCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCCCCCHHHH ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEAAKAV HCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHC RPDCIIGTGRSDYPNQINNVLCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASD CCCEEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGAAYGGETPSFGPEYLIPRPLDPRLLVELSSAVAQAAMDSGVATRPITDMEAYRDKLGQ HCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAV HHHCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH MVARGEADAMLSGVVGRFHKKLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQE HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCC DPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDSRDALKMRQVREALLKRKPEL CCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC NIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRKLLEAEKGGADKSND HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]