| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84621891
Identifier: 84621891
GI number: 84621891
Start: 261955
End: 262263
Strand: Direct
Name: 84621891
Synonym: XOO_0234
Alternate gene names: NA
Gene position: 261955-262263 (Clockwise)
Preceding gene: 84621890
Following gene: 84621893
Centisome position: 5.3
GC content: 66.67
Gene sequence:
>309_bases ATGGGCCTGCTTGCCGAAGGCGGCGAGTTGATTTCGTTCGGCTCGATGACCGGCGAGCCCCTGGAGATTTCCAGCGGCGA TGTGATCTTCAAGCAGGCCACCGTGCGCGGCTTCTGGGGCAGCAAGGTCATGCAGGCCACCACGTCCGAAGACAAGCGCC GCATGATCGGCGAGCTGTTGAAGGCCGCGCTCGACGGCAGCCTGGCGCTGCCGGTGGAAGCGGTGTTCGATCTGGAAGAC GCGGCCAAGGCGGCAGCGGCCAGCGCCGAACCGGGCCGACGCGGCAAGATTCTGCTACGCGCCGGTTGA
Upstream 100 bases:
>100_bases TGCGCAAGATGGTTGGTAAGACGCCGTCCGCGCGCTGGCCGGCGATGCACCGATCGTGCGCGCGATCGAATCGGTTGCCG GCAAGGCGGCAGGCGAGCTG
Downstream 100 bases:
>100_bases GCGGGGCGCGCGCCGATTGAAACAGCGCCAGCGCGGGGGGGGCGGGGTGGCGGTCGCTCGCGCTGGCTGGATAGCAGGGT CGCTTGCGCTGCTGGAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alcohol Dehydrogenase; Oxidoreductase/Dehydrogenase; Trans-2-Enoyl-CoA Reductase; Dehydrogenase/Oxidoreductase; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MGLLAEGGELISFGSMTGEPLEISSGDVIFKQATVRGFWGSKVMQATTSEDKRRMIGELLKAALDGSLALPVEAVFDLED AAKAAAASAEPGRRGKILLRAG
Sequences:
>Translated_102_residues MGLLAEGGELISFGSMTGEPLEISSGDVIFKQATVRGFWGSKVMQATTSEDKRRMIGELLKAALDGSLALPVEAVFDLED AAKAAAASAEPGRRGKILLRAG >Mature_101_residues GLLAEGGELISFGSMTGEPLEISSGDVIFKQATVRGFWGSKVMQATTSEDKRRMIGELLKAALDGSLALPVEAVFDLEDA AKAAAASAEPGRRGKILLRAG
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10637; Mature: 10506
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLAEGGELISFGSMTGEPLEISSGDVIFKQATVRGFWGSKVMQATTSEDKRRMIGELL CCCCCCCCCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHH KAALDGSLALPVEAVFDLEDAAKAAAASAEPGRRGKILLRAG HHHHCCCCCCCHHHHHCHHHHHHHHHCCCCCCCCCEEEEECC >Mature Secondary Structure GLLAEGGELISFGSMTGEPLEISSGDVIFKQATVRGFWGSKVMQATTSEDKRRMIGELL CCCCCCCCEEEECCCCCCCEEECCCCEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHH KAALDGSLALPVEAVFDLEDAAKAAAASAEPGRRGKILLRAG HHHHCCCCCCCHHHHHCHHHHHHHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA