| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621874
Identifier: 84621874
GI number: 84621874
Start: 235964
End: 237055
Strand: Direct
Name: 84621874
Synonym: XOO_0217
Alternate gene names: NA
Gene position: 235964-237055 (Clockwise)
Preceding gene: 84621868
Following gene: 84621875
Centisome position: 4.78
GC content: 64.56
Gene sequence:
>1092_bases ATGTCCAACTCGCCGAAGCTTGTCGTTCCTCTGATGGTGACCGGTGCAGTTGCGCTGCTGTGCATGACGTCGTCAGGCGC AGCGACGCCCGCACCCGCCGTAGAGTGCATCCAGTTGCGCAGCAAGGCGGTTGAGTTGAGCGCAACGCCAGCCTTTGGGG GGCGTGTGCTGTCGTTCAATCTGCGCGGTCAGCCGAATGTTTTGAAAGTCGGCGCTGCGGTCGAGCAACAGCCTGCGCCT GAGGTTTCAGCCGCTTCGGGGGATATTGCGTATTTTGGCCATGATGTGTGGGTTGGGCCGCAGAGTCAGTGGTGGTTGCA CCAGCAGCTCAACCACGAACGTCAGGCGGCGGCCGCGGTTTGGCCGCCAGACCCGTATCTGTCGCTGGCGCACACGCACC TCGCCCGGCGGAGTCATGACGCGTTGGAATTTGAAGGCGTGCCCAGCCCGCTGACCGGGGTGCAATTACGCAAGCAGATC CAACTTTCTGCAGGGCGCGCGGACACTGTGGAGATTCAGGCCAGCGCACGCAATATCCGTACGGAAGCGATTGCTTGGGA CCTCTGGTTCAACACGCGCGTTGCGGCCACGACCCGAGTCTTTGTACCAGTTGCTGCTGCGGGAGATATTCGTGTGCAGC CGCCGAGCGAGGCCGGGACGACTGCGCCGCGGTTTAAGCGCGCGCGCGGCGTCTTTGCCCTGCGCGCCGATGCGGGCCAA GACGGACTGATCCAGCGCGGCAAGCTGTTACTGCAGCCATCTGCGGGATGGATGGCCGGTTTTGCTGGCGGGCAGGTGTT GCTGATCCGCTTCGCGCATCAACCGCTGGCGGCAATCCATCCTGAGCAGGGGCAGGTGGAGTTGTATCTGGATACGCCAC GCCGGCATCCAGAGCAGGGGCTGCTGGAAATGGAGGTGCACGCGCCCTATCGACAGCTCGCGCCAGGGGCGCAGATGCAG GCGCAGGAGCAGTGGACGTTGCTGCGCTACACCGGGCCGGATGAGGAGCAGGCGCAGCGGCAGTTCCTCTGCAGCCAGGC CAAAGCGCTGGCGCTGGCCAATGCCTGCGATGCGCCGTCCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases GATATCATCAACCCCGGACTCTAAACCCGACTGCTACTCAGATTGGGGGGACGTCGATGCAGCGGGCCACAATCCCGAGG CCCTTGTTTGGAATCGCGAT
Downstream 100 bases:
>100_bases GGCGCGCATTCACCTCGAAGCCGGGCTGTGGCTATGATGTCGCCCAATCCCTGACCAGATCGATGCGCATGCAACGACGC CACTTGCTGAAAAATGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSNSPKLVVPLMVTGAVALLCMTSSGAATPAPAVECIQLRSKAVELSATPAFGGRVLSFNLRGQPNVLKVGAAVEQQPAP EVSAASGDIAYFGHDVWVGPQSQWWLHQQLNHERQAAAAVWPPDPYLSLAHTHLARRSHDALEFEGVPSPLTGVQLRKQI QLSAGRADTVEIQASARNIRTEAIAWDLWFNTRVAATTRVFVPVAAAGDIRVQPPSEAGTTAPRFKRARGVFALRADAGQ DGLIQRGKLLLQPSAGWMAGFAGGQVLLIRFAHQPLAAIHPEQGQVELYLDTPRRHPEQGLLEMEVHAPYRQLAPGAQMQ AQEQWTLLRYTGPDEEQAQRQFLCSQAKALALANACDAPSAPR
Sequences:
>Translated_363_residues MSNSPKLVVPLMVTGAVALLCMTSSGAATPAPAVECIQLRSKAVELSATPAFGGRVLSFNLRGQPNVLKVGAAVEQQPAP EVSAASGDIAYFGHDVWVGPQSQWWLHQQLNHERQAAAAVWPPDPYLSLAHTHLARRSHDALEFEGVPSPLTGVQLRKQI QLSAGRADTVEIQASARNIRTEAIAWDLWFNTRVAATTRVFVPVAAAGDIRVQPPSEAGTTAPRFKRARGVFALRADAGQ DGLIQRGKLLLQPSAGWMAGFAGGQVLLIRFAHQPLAAIHPEQGQVELYLDTPRRHPEQGLLEMEVHAPYRQLAPGAQMQ AQEQWTLLRYTGPDEEQAQRQFLCSQAKALALANACDAPSAPR >Mature_362_residues SNSPKLVVPLMVTGAVALLCMTSSGAATPAPAVECIQLRSKAVELSATPAFGGRVLSFNLRGQPNVLKVGAAVEQQPAPE VSAASGDIAYFGHDVWVGPQSQWWLHQQLNHERQAAAAVWPPDPYLSLAHTHLARRSHDALEFEGVPSPLTGVQLRKQIQ LSAGRADTVEIQASARNIRTEAIAWDLWFNTRVAATTRVFVPVAAAGDIRVQPPSEAGTTAPRFKRARGVFALRADAGQD GLIQRGKLLLQPSAGWMAGFAGGQVLLIRFAHQPLAAIHPEQGQVELYLDTPRRHPEQGLLEMEVHAPYRQLAPGAQMQA QEQWTLLRYTGPDEEQAQRQFLCSQAKALALANACDAPSAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39214; Mature: 39083
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSPKLVVPLMVTGAVALLCMTSSGAATPAPAVECIQLRSKAVELSATPAFGGRVLSFN CCCCCCEEEEHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEE LRGQPNVLKVGAAVEQQPAPEVSAASGDIAYFGHDVWVGPQSQWWLHQQLNHERQAAAAV ECCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHCCHHHHCEEE WPPDPYLSLAHTHLARRSHDALEFEGVPSPLTGVQLRKQIQLSAGRADTVEIQASARNIR CCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCE TEAIAWDLWFNTRVAATTRVFVPVAAAGDIRVQPPSEAGTTAPRFKRARGVFALRADAGQ EEEEEEEEEECCEEEEEEEEEEEEECCCCEEECCCCCCCCCCHHHHHHCCEEEEEECCCC DGLIQRGKLLLQPSAGWMAGFAGGQVLLIRFAHQPLAAIHPEQGQVELYLDTPRRHPEQG CCHHHCCEEEEECCCCCEEECCCCEEEEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCC LLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPDEEQAQRQFLCSQAKALALANACDAPS CEEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC APR CCC >Mature Secondary Structure SNSPKLVVPLMVTGAVALLCMTSSGAATPAPAVECIQLRSKAVELSATPAFGGRVLSFN CCCCCEEEEHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEE LRGQPNVLKVGAAVEQQPAPEVSAASGDIAYFGHDVWVGPQSQWWLHQQLNHERQAAAAV ECCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHCCHHHHCEEE WPPDPYLSLAHTHLARRSHDALEFEGVPSPLTGVQLRKQIQLSAGRADTVEIQASARNIR CCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCE TEAIAWDLWFNTRVAATTRVFVPVAAAGDIRVQPPSEAGTTAPRFKRARGVFALRADAGQ EEEEEEEEEECCEEEEEEEEEEEEECCCCEEECCCCCCCCCCHHHHHHCCEEEEEECCCC DGLIQRGKLLLQPSAGWMAGFAGGQVLLIRFAHQPLAAIHPEQGQVELYLDTPRRHPEQG CCHHHCCEEEEECCCCCEEECCCCEEEEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCC LLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPDEEQAQRQFLCSQAKALALANACDAPS CEEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC APR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA