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The map label for this gene is mdoD

Identifier: 84621875

GI number: 84621875

Start: 237124

End: 238722

Strand: Direct

Name: mdoD

Synonym: XOO_0218

Alternate gene names: 84621875

Gene position: 237124-238722 (Clockwise)

Preceding gene: 84621874

Following gene: 84621878

Centisome position: 4.8

GC content: 63.66

Gene sequence:

>1599_bases
ATGCAACGACGCCACTTGCTGAAAAATGCTGCCGCCGCATTGGCCGCGCTCGGTCTGCCGGCGCTGCCGCAGTGGGCGCT
GGCAGCCAAGGCGGTTGGGTTGCGGCGGCTCGGGCAGCCGCAGCCGTTCGACTATGCTTGGTTGAAGGGTCGGGCGCGCG
AGCTGGCAAAGGCGCCGTACAAGAGCCATAAGCAGGTTTTGCCGGGGCCACTGGAGGCGCTGAACTGGGATCAGTACCAG
TCCATCCGCTACCGCCAGGACCACGCGCTGTGGGCCGATGGCAATGGCAAATTCCAGGCGAAGTTCTTCCATCTTGGGCT
GTATTTCCATACCCCGGTGCACATCTACGACATCGTCGATGGCAAGGCGCAGCAGCTGGCATACGACCCGGCCGCATTCG
ATTACGGCAAAAGCGGGCTGGGTGGCAAGCAATTGCCGAAGGATCTGGGCTTTGCCGGTTTCCGGCTCAATACGCGCAAG
GATACCGAGCGCGACTTTTCGGCGTTCCTGGGCGCGAGCTATTTCCGTGCTGTCGGCAAGGAAGGCCAGTACGGACAATC
CGCGCGCGGGCTGGCGATCGATACCGGGACCGGCGGGCCGGAAGAGTTTCCGGATTTCATCGCCTATTACCTGGAGCAGC
CGGCCGCCGACTCGAACACGGTGGTGGTGTACGGGTTGCTGGATTCGCCCAGCATTGCCGGCGCCTACCGGTTCGCCATC
ACCAATGGCGATGTGCTGCTGATGGACATCGACAGCGCGTTGTACCCGCGCAAGACGATCGAGCGGCTGGGCATCGGGCC
GTGCACCAGCATGTATCAGGTCGGCGAAAACGATAACCGGATGGACTGGGACTGGCGCCCGGAAATTCACGACACCGATG
GCTTGGCGATGTGGACCGGTGGCGGCGAGTGGATCTGGCGCCCGTTGTGCAACCCGCCGCACGTGCGCTTCAACATGTTT
GTCGACGAAAACCCGCGTGGCTTCGGGCTGCTGCAGCGCGACCGCAACTTCGACCATTACCAGGACGATGGCGTGTTTTA
CGAGAAGCGCCCCTGCCTGTGGGTGGAACCCAAGAGTGGTTGGGGCAAGGGCTCGGTGCAGTTGGTCGAGATTCCGACTG
TGGACGAAACCTTCGACAACATCGTGGCGTTCTGGAACCCGCAAGCAAAGCCGCAGCCTGGGCAGGAACTGCTGATGGGC
TACCGGCTGTATTGGGGCGCGCAGCCGCCGGCCAGCGCGCCGCTGGCGCATTGCGTGGCCACCCGAACCGGCCTTGGCGG
CATCGTGGGGCAAAAGCGCAGCCACTTTTCCTGGCGCTTTGCAGTGGATTTTGCCGGCGGCGAACTGGCGGCGCTGGCAA
AAGACCCCAAGGCCAAGGTGGAGGCGGTGCTGCAGGTGTCGCGCGGCACCACCGAAATCGTGTCGGCGCGCCCGCTGCAT
GAGCTCAAGGGCTATCGGGCAATGTTCGACCTGGTACCGCCGGACGAGGGCACCCAGCAGATCGATATCCGCCTGTATCT
GCGCGCCAACGGCAAGCCGCTGACCGAAACCTGGCTGTACCAGTGGACCCCGCTGGCAGCGAGCGAGCGCAAGAATTGA

Upstream 100 bases:

>100_bases
ATGCCTGCGATGCGCCGTCCGCGCCGCGCTGAGGCGCGCATTCACCTCGAAGCCGGGCTGTGGCTATGATGTCGCCCAAT
CCCTGACCAGATCGATGCGC

Downstream 100 bases:

>100_bases
CTGAGGATCGTCGAGCGAGGCGGCTGGCGCCTGTTGTTGCGCCAGCGCCGCGTTGCGGCGTGCGGCCATCGGCCCGCGCG
TGCTTCGAGTCCGCCGCATC

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MQRRHLLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGRARELAKAPYKSHKQVLPGPLEALNWDQYQ
SIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRK
DTERDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPAADSNTVVVYGLLDSPSIAGAYRFAI
TNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHVRFNMF
VDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMG
YRLYWGAQPPASAPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDPKAKVEAVLQVSRGTTEIVSARPLH
ELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPLAASERKN

Sequences:

>Translated_532_residues
MQRRHLLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGRARELAKAPYKSHKQVLPGPLEALNWDQYQ
SIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRK
DTERDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPAADSNTVVVYGLLDSPSIAGAYRFAI
TNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHVRFNMF
VDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMG
YRLYWGAQPPASAPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDPKAKVEAVLQVSRGTTEIVSARPLH
ELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPLAASERKN
>Mature_532_residues
MQRRHLLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGRARELAKAPYKSHKQVLPGPLEALNWDQYQ
SIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRK
DTERDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPAADSNTVVVYGLLDSPSIAGAYRFAI
TNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHVRFNMF
VDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMG
YRLYWGAQPPASAPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDPKAKVEAVLQVSRGTTEIVSARPLH
ELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPLAASERKN

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs)

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family

Homologues:

Organism=Escherichia coli, GI145693128, Length=548, Percent_Identity=43.7956204379562, Blast_Score=438, Evalue=1e-124,
Organism=Escherichia coli, GI1787286, Length=485, Percent_Identity=38.7628865979381, Blast_Score=326, Evalue=3e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPGD_XANOP (B2SHI0)

Other databases:

- EMBL:   CP000967
- RefSeq:   YP_001911432.1
- GeneID:   6303757
- GenomeReviews:   CP000967_GR
- KEGG:   xop:PXO_03624
- HOGENOM:   HBG349977
- OMA:   MYQVGEN
- ProtClustDB:   PRK13273
- BioCyc:   XORY360094:XOOORF_0237-MONOMER
- HAMAP:   MF_01068
- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756
- InterPro:   IPR006311
- PIRSF:   PIRSF006281
- TIGRFAMs:   TIGR01409

Pfam domain/function: PF04349 MdoG; SSF74650 Gal_mut_like; SSF81296 Ig_E-set

EC number: NA

Molecular weight: Translated: 59554; Mature: 59554

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS51318 TAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRHLLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGRARELAKAPY
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH
KSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVD
HHCCCCCCCCHHHCCCCHHHHHEEECCCEEEECCCCEEEEEEEEEEEEEECCEEEEEECC
GKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRKDTERDFSAFLGASYFRAVGK
CCHHHEECCCCHHCCCCCCCCCCCCCHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCC
EGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPAADSNTVVVYGLLDSPSIAGAYRFAI
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEE
TNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTG
ECCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECC
GGEWIWRPLCNPPHVRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSG
CCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCCC
WGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRLYWGAQPPASAPLAHCVA
CCCCCEEEEEECCCHHHHHCEEEEECCCCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHH
TRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDPKAKVEAVLQVSRGTTEIVSARPLH
HHCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCHHHHCCCCHH
ELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPLAASERKN
HHCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCHHHEEEECCCCCCCCCC
>Mature Secondary Structure
MQRRHLLKNAAAALAALGLPALPQWALAAKAVGLRRLGQPQPFDYAWLKGRARELAKAPY
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH
KSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVD
HHCCCCCCCCHHHCCCCHHHHHEEECCCEEEECCCCEEEEEEEEEEEEEECCEEEEEECC
GKAQQLAYDPAAFDYGKSGLGGKQLPKDLGFAGFRLNTRKDTERDFSAFLGASYFRAVGK
CCHHHEECCCCHHCCCCCCCCCCCCCHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCC
EGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPAADSNTVVVYGLLDSPSIAGAYRFAI
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEE
TNGDVLLMDIDSALYPRKTIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTG
ECCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECC
GGEWIWRPLCNPPHVRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSG
CCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCCC
WGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRLYWGAQPPASAPLAHCVA
CCCCCEEEEEECCCHHHHHCEEEEECCCCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHH
TRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDPKAKVEAVLQVSRGTTEIVSARPLH
HHCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCHHHHCCCCHH
ELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPLAASERKN
HHCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCHHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA