Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84621794

Identifier: 84621794

GI number: 84621794

Start: 139397

End: 140554

Strand: Direct

Name: 84621794

Synonym: XOO_0137

Alternate gene names: NA

Gene position: 139397-140554 (Clockwise)

Preceding gene: 84621793

Following gene: 84621795

Centisome position: 2.82

GC content: 61.14

Gene sequence:

>1158_bases
ATGAAATACTTCTCGCTCGTATGGGCGCAGCTGTTCCGCAGCGAGACGCGGACGCTGCTGACCCTGCTGTCGGTGGTCGC
TGCATTCCTGTTGTTCGGCATGCTCGATTCGGTGCGTGTGGCGTTCAATTCCGGCGGCAGCATCGAAGGCGTCAACCGCC
TGGTGGTGACCTCGCGCCTGTCGATCACCCAGTCGCTGCCGATCCGCCTGGGTACGCAGATACGCGAGGTGGCCGGGGTG
CGCGATGTGACCTCGGCGATATGGTTCGGTGGCATCTATAAAGATCCGAAGAACTTCTTCGCCAACTCCTCGGTGGCTCC
GAACTACTTCGACGTCTACCGTGAACTGCAGATTCCTCCAGAACAGCTGAAGGCGTTCCATACCACACGCGCCGGCGCGA
TCGTTGGCGAATCGCTGGCCAAAGAGTTCGGCTGGAAGCTCGGCGACACCATCCCACTGCAGGCGACGCTCTTCCCACGC
GGCGGCAGCAATAACTGGCCGCTGGAACTGGTCGGCATCTTCCGCTCCAAGGACCGCACGCTGGCCGCCAACGAGGAACG
CCAGCTGATGATGAATTGGAAGTACTTTGATGAATCCAATGACTACATCAAAAACAAGGTCAGCTGGTACACGGTGACGC
TGGACAACCCCGACCATGCCTCGCGCGTTGCGCAGGCGATCGATGCGATCTCGGCCAACTCCGATCACGAAACCAAGAGC
CAGACCGAATCGGCATTTCAACAGGCCTTCGTTAAGCAGTTCGCCGACATCGGCATGATCGTCACCTCGATCATGGGCGC
GGTGTTCTTCACACTGCTGCTGTTGACCGGCAACACCATGGCCCAGGCGGTACGCGAGCGCATCCCGGAACTGGCGACGC
TGAAGACGCTCGGCTTCAAGGACGGCACGCTGCTGACTCTGGTGATGGTCGAATCGGTGCTACTGATTGGGCTCGGTGGT
GCGACCGGACTGGGTCTTGCGGCGTTGATCCTGCCGGGGCTGGCGTCAAAGGCAATGGGCATGCTGCCTCCGAACGTGCC
ACTTCAAACCTGGCTGGTCGGTGCCGGGCTGATCGTGGTGATCGGCGTGGTAGTCGGCGTGCTGCCGGCGCTACGCGCGA
AGCGTCTGAAGATCGTCGATGCCCTGGCTGGGCGCTGA

Upstream 100 bases:

>100_bases
CACCCACGATCCCAAGGCCGCCGAGTACGCCTCGCATACCGTGCATCTGGACAAGGGCGAGCTGGCCGACGCACTGGTCG
CTGACTAACCGGAGACGACG

Downstream 100 bases:

>100_bases
GAGGAGATCGACATGAAGAAGCATTGGTTGGGCAACGCGCTGTCGATCCTGCTGATGGTGGTGGGCCTGGGCGTGTGGAT
CGCGCTGCCATGGATCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transport System Permease Protein; ABC Efflux Pump Inner Membrane Subunit; ABC Transporter Permease Protein; ABC Transporter Membrane Protein; Permease MacB Permease Domain; Transmembrane Permease; Membrane Transporter Protein; Transmembrane Protein

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKYFSLVWAQLFRSETRTLLTLLSVVAAFLLFGMLDSVRVAFNSGGSIEGVNRLVVTSRLSITQSLPIRLGTQIREVAGV
RDVTSAIWFGGIYKDPKNFFANSSVAPNYFDVYRELQIPPEQLKAFHTTRAGAIVGESLAKEFGWKLGDTIPLQATLFPR
GGSNNWPLELVGIFRSKDRTLAANEERQLMMNWKYFDESNDYIKNKVSWYTVTLDNPDHASRVAQAIDAISANSDHETKS
QTESAFQQAFVKQFADIGMIVTSIMGAVFFTLLLLTGNTMAQAVRERIPELATLKTLGFKDGTLLTLVMVESVLLIGLGG
ATGLGLAALILPGLASKAMGMLPPNVPLQTWLVGAGLIVVIGVVVGVLPALRAKRLKIVDALAGR

Sequences:

>Translated_385_residues
MKYFSLVWAQLFRSETRTLLTLLSVVAAFLLFGMLDSVRVAFNSGGSIEGVNRLVVTSRLSITQSLPIRLGTQIREVAGV
RDVTSAIWFGGIYKDPKNFFANSSVAPNYFDVYRELQIPPEQLKAFHTTRAGAIVGESLAKEFGWKLGDTIPLQATLFPR
GGSNNWPLELVGIFRSKDRTLAANEERQLMMNWKYFDESNDYIKNKVSWYTVTLDNPDHASRVAQAIDAISANSDHETKS
QTESAFQQAFVKQFADIGMIVTSIMGAVFFTLLLLTGNTMAQAVRERIPELATLKTLGFKDGTLLTLVMVESVLLIGLGG
ATGLGLAALILPGLASKAMGMLPPNVPLQTWLVGAGLIVVIGVVVGVLPALRAKRLKIVDALAGR
>Mature_385_residues
MKYFSLVWAQLFRSETRTLLTLLSVVAAFLLFGMLDSVRVAFNSGGSIEGVNRLVVTSRLSITQSLPIRLGTQIREVAGV
RDVTSAIWFGGIYKDPKNFFANSSVAPNYFDVYRELQIPPEQLKAFHTTRAGAIVGESLAKEFGWKLGDTIPLQATLFPR
GGSNNWPLELVGIFRSKDRTLAANEERQLMMNWKYFDESNDYIKNKVSWYTVTLDNPDHASRVAQAIDAISANSDHETKS
QTESAFQQAFVKQFADIGMIVTSIMGAVFFTLLLLTGNTMAQAVRERIPELATLKTLGFKDGTLLTLVMVESVLLIGLGG
ATGLGLAALILPGLASKAMGMLPPNVPLQTWLVGAGLIVVIGVVVGVLPALRAKRLKIVDALAGR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41967; Mature: 41967

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYFSLVWAQLFRSETRTLLTLLSVVAAFLLFGMLDSVRVAFNSGGSIEGVNRLVVTSRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SITQSLPIRLGTQIREVAGVRDVTSAIWFGGIYKDPKNFFANSSVAPNYFDVYRELQIPP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCH
EQLKAFHTTRAGAIVGESLAKEFGWKLGDTIPLQATLFPRGGSNNWPLELVGIFRSKDRT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCC
LAANEERQLMMNWKYFDESNDYIKNKVSWYTVTLDNPDHASRVAQAIDAISANSDHETKS
CCCCCCHHEEEEEEEECCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHH
QTESAFQQAFVKQFADIGMIVTSIMGAVFFTLLLLTGNTMAQAVRERIPELATLKTLGFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCC
DGTLLTLVMVESVLLIGLGGATGLGLAALILPGLASKAMGMLPPNVPLQTWLVGAGLIVV
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IGVVVGVLPALRAKRLKIVDALAGR
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYFSLVWAQLFRSETRTLLTLLSVVAAFLLFGMLDSVRVAFNSGGSIEGVNRLVVTSRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SITQSLPIRLGTQIREVAGVRDVTSAIWFGGIYKDPKNFFANSSVAPNYFDVYRELQIPP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCH
EQLKAFHTTRAGAIVGESLAKEFGWKLGDTIPLQATLFPRGGSNNWPLELVGIFRSKDRT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCC
LAANEERQLMMNWKYFDESNDYIKNKVSWYTVTLDNPDHASRVAQAIDAISANSDHETKS
CCCCCCHHEEEEEEEECCCCHHHHCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHH
QTESAFQQAFVKQFADIGMIVTSIMGAVFFTLLLLTGNTMAQAVRERIPELATLKTLGFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCC
DGTLLTLVMVESVLLIGLGGATGLGLAALILPGLASKAMGMLPPNVPLQTWLVGAGLIVV
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IGVVVGVLPALRAKRLKIVDALAGR
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA