| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621785
Identifier: 84621785
GI number: 84621785
Start: 131619
End: 131999
Strand: Direct
Name: 84621785
Synonym: XOO_0128
Alternate gene names: NA
Gene position: 131619-131999 (Clockwise)
Preceding gene: 84621782
Following gene: 84621786
Centisome position: 2.66
GC content: 65.09
Gene sequence:
>381_bases ATGGGCGGTGCTAGCGACTATGCGGGTGCCGGCTTTAGGAATGCGTTAGCCGGCGCCAGTGACCGCGTGCCGTGTGGGTC GCGCGGGGTGCTGCGTTCATTCCAGCTGCGACAGTGCCTGTGGAATCGGCGTCTGGCCGTCGATAACGCCCAACGTTTTG CCGATGCTGGCCAGCGTTGCCAGTACGGCAGCGATCACCTGTGCCACGTTGCCGCGCGAGACGCCGCCCGCAGTGTCGCT GCCTGCACCGACATAACGCGAATGCGCGTGCATCCGCCGCTGCGCGCTACGGCGATTGCTTCATGCATGGCACTGCTCAA ACACCCAGGCATGTGGCGATCGAAGATGCCCGCCAGCATTCCCCGCAGCCGCCACATCTAG
Upstream 100 bases:
>100_bases GCATGCGCGGGCGCCGCCTGCGCCACATGTTCGAGCAGATACGGCGGCAAAATCCCGGCGCGGCGCGGACTGGCGAACGC GGACATAAGCGACCTCCACA
Downstream 100 bases:
>100_bases GACACTGATGCGCCAACGTCTGCGAGAAGTGGTGATGCCGATGTCTTCCGAGTTACGCCCGCGTGTTGGCTGTGGTGCCT TCATCCAGCGGGCCGACGGC
Product: hypotehtical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MGGASDYAGAGFRNALAGASDRVPCGSRGVLRSFQLRQCLWNRRLAVDNAQRFADAGQRCQYGSDHLCHVAARDAARSVA ACTDITRMRVHPPLRATAIASCMALLKHPGMWRSKMPASIPRSRHI
Sequences:
>Translated_126_residues MGGASDYAGAGFRNALAGASDRVPCGSRGVLRSFQLRQCLWNRRLAVDNAQRFADAGQRCQYGSDHLCHVAARDAARSVA ACTDITRMRVHPPLRATAIASCMALLKHPGMWRSKMPASIPRSRHI >Mature_125_residues GGASDYAGAGFRNALAGASDRVPCGSRGVLRSFQLRQCLWNRRLAVDNAQRFADAGQRCQYGSDHLCHVAARDAARSVAA CTDITRMRVHPPLRATAIASCMALLKHPGMWRSKMPASIPRSRHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13705; Mature: 13574
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGASDYAGAGFRNALAGASDRVPCGSRGVLRSFQLRQCLWNRRLAVDNAQRFADAGQRC CCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC QYGSDHLCHVAARDAARSVAACTDITRMRVHPPLRATAIASCMALLKHPGMWRSKMPASI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PRSRHI CCCCCC >Mature Secondary Structure GGASDYAGAGFRNALAGASDRVPCGSRGVLRSFQLRQCLWNRRLAVDNAQRFADAGQRC CCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC QYGSDHLCHVAARDAARSVAACTDITRMRVHPPLRATAIASCMALLKHPGMWRSKMPASI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PRSRHI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA