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The map label for this gene is IS1086 [H]

Identifier: 84621782

GI number: 84621782

Start: 129027

End: 129974

Strand: Direct

Name: IS1086 [H]

Synonym: XOO_0125

Alternate gene names: 84621782

Gene position: 129027-129974 (Clockwise)

Preceding gene: 84621781

Following gene: 84621785

Centisome position: 2.61

GC content: 59.7

Gene sequence:

>948_bases
ATGAGCATCAACTCCATTGCAAGGCGACTCAATCGCAATGCGTGCACGCTGTCGCGCGAGATACGGCGACAGGGCGCACC
TGGCTATGCGGCAACCAGCGCAGCCAGCAACTATCGGCTGCGCCGCAGGGCCTGCGTTCGAAGGCGCCGGCTTGTTGAAG
GCAGTGCGATCTTTCAGCAGGTGCGTGACGACTTGGTTCTATATCGTTGGTCGCCCCAGCAAATTGCTGCCAAGCTCAAG
GCCATGCATCCGGATGATCCAAGTCAACGCGTGAGCCACGAAACAATCTACACCGCTATCTACACGCATCCGCGTGGTGG
TTTGAAGAAGGAGCTCGTGGAAGCGCTTCGTCAGCACAAGCCGACGCGCGGCTTGCGCCGTACGACCGCTGCCAAGCGCA
CGTGGGTGCCGGAGGAGCTGCGTATCGTCCATCGGCCTGAAGAGGTGGCGCAGCGCTTGATTCCTGGGCACTGGGAAGGC
GACCTGATCAAAGGGGCTTTCAACCGCTCGTGCGTAGGCACGCTGGTGGAGCGAAAGACGCGCTTTGTGGTGCTGTGCAA
GATGGATGGCTGTACTCCACAGGATGCGCTGGAGGGCTTCACGCGACAGATGAAGAAGCTGCCGCATTGCCTGCTGGGAA
GCCTCACCTATGACCGTGGAACCGAGATGACGTGTTATCCAGAGCTGATGAAGCGGCTCAACATCGACCTGTGGTTCGCC
GATCCACATGCGCCCTGGCAGCGCGGCAGCAATGAGAACACCAACGGCCTGCTGTGCCAGTTCATGCCCAAAGGCGTGGA
CTTGTCCAAGGCCAGCCAGGAGTATCTCAACAACGTCGCCGACCTGATGAACGCCCGGCCACGGCAGACGCTTGGCTGGA
AGACCCCAAACCAGGCGCTGGAAGAAGAGATCGCTCAATTCAACTCACGTGTTGCACTTGCAAGTTGA

Upstream 100 bases:

>100_bases
CACCCCGCCTTGACGTAGAGTAGTGGCATGGGCAAACAGTACAGACCCCTGGATTCCGAAGAACGCGCTTTGCTTCAAAT
CGAACTCGGTAACTGTCGGA

Downstream 100 bases:

>100_bases
GACCGCCATGTCTTCAGACTGACCTGTGCGCTGCACGTCGCGCTAACGCGGTGCGCGCCACTATGCATCACCAGCTGTGC
AGCCCTAGAGCATCTAGGCA

Product: ISXoo15 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSINSIARRLNRNACTLSREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSAIFQQVRDDLVLYRWSPQQIAAKLK
AMHPDDPSQRVSHETIYTAIYTHPRGGLKKELVEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVAQRLIPGHWEG
DLIKGAFNRSCVGTLVERKTRFVVLCKMDGCTPQDALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFA
DPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQALEEEIAQFNSRVALAS

Sequences:

>Translated_315_residues
MSINSIARRLNRNACTLSREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSAIFQQVRDDLVLYRWSPQQIAAKLK
AMHPDDPSQRVSHETIYTAIYTHPRGGLKKELVEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVAQRLIPGHWEG
DLIKGAFNRSCVGTLVERKTRFVVLCKMDGCTPQDALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFA
DPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQALEEEIAQFNSRVALAS
>Mature_314_residues
SINSIARRLNRNACTLSREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSAIFQQVRDDLVLYRWSPQQIAAKLKA
MHPDDPSQRVSHETIYTAIYTHPRGGLKKELVEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVAQRLIPGHWEGD
LIKGAFNRSCVGTLVERKTRFVVLCKMDGCTPQDALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFAD
PHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQALEEEIAQFNSRVALAS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=309, Percent_Identity=35.9223300970874, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1790736, Length=309, Percent_Identity=35.9223300970874, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1787671, Length=309, Percent_Identity=35.9223300970874, Blast_Score=177, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 36018; Mature: 35887

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINSIARRLNRNACTLSREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSAIFQQ
CCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDDLVLYRWSPQQIAAKLKAMHPDDPSQRVSHETIYTAIYTHPRGGLKKELVEALRQHK
HHHCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCC
PTRGLRRTTAAKRTWVPEELRIVHRPEEVAQRLIPGHWEGDLIKGAFNRSCVGTLVERKT
CCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHCCC
RFVVLCKMDGCTPQDALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFA
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEC
DPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQAL
CCCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
EEEIAQFNSRVALAS
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
SINSIARRLNRNACTLSREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSAIFQQ
CHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDDLVLYRWSPQQIAAKLKAMHPDDPSQRVSHETIYTAIYTHPRGGLKKELVEALRQHK
HHHCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCC
PTRGLRRTTAAKRTWVPEELRIVHRPEEVAQRLIPGHWEGDLIKGAFNRSCVGTLVERKT
CCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHCCC
RFVVLCKMDGCTPQDALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFA
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEC
DPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQAL
CCCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
EEEIAQFNSRVALAS
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]