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The map label for this gene is 84621755

Identifier: 84621755

GI number: 84621755

Start: 102751

End: 103689

Strand: Direct

Name: 84621755

Synonym: XOO_0098

Alternate gene names: NA

Gene position: 102751-103689 (Clockwise)

Preceding gene: 84621754

Following gene: 84621756

Centisome position: 2.08

GC content: 62.41

Gene sequence:

>939_bases
ATGACCATGCAGCTTCGCGTACTGACAGGAACCCACGCAGGCGCACGATTAGATTTGGCACCAGGTCGCTACACCCTGGG
GAGTGATCCCCAAACCGATATACGAATAGACGATTGGCCTGGTTGCTCACTCAGTATCGAGGTAGACCAAGATGGGCAGA
TCCGCTATAGCAGCGACACGTTGCCAGAAACGTCCTTCGTTGCGTTTCAGCCAGTGCGCTTCGGCCCGTTGGTGCTATGT
GTTGGCGATGCTGGTGCCGATTGGCCGGACGATGTGGCGTTGCTGGAGCGGCTGCTTTCCCCAGCACCGCCACCAGCGCC
GCGCACGTCCAGGCGCAACATCGTGCGTACTGCGGTGGGCGCCGTGCTAGCACTTGCAGCCGCGGCGTTGCTCCCCTCGT
TGCAGCCCGCGTTTCTGTCCGATGCTGCCGCCCGGCAACATCCGGAAACTGCCGTCAATCAGGCCAAAGGTTTATTGAAG
CAGCTGGGCTTTCGCGAAGCGCATGTTGCACAGGTCGGCACGCGCGTGCTGATCGAAGGCCTGGTGCCAAGCAGCGCCGA
TGCTGCACGCTTGCGTGCGCAGGTGCGTCGCTATCACCCGGGCGTTGCCGTCAACGTGGCCGTGGTGGACGAGGTGGTGG
CGACGCTGCGCGACACCCTGGCTGACCCCGCCCTCAGCGTACGTTACGAGGGCAATGGCGTTTTCTCGGTTTCCGGCAGC
AGCGACTACGCAGAACGTGCAAGCCGCCGGATTGCCGACGTCCGCAGCGACCTGGGCCCCGAGGTCCGCGCGCTGCACGT
GGAGATCAGCCAGCAAGACCCGTCCATAAAAACACCGGATAATTACGACGCGGCATTGCTCGCCGATGACCTGCACTATG
TCGAAACGCCGGATGGTACCAAGCACATGACATCCCTGCCGCAGCAAGCGGCGCAATGA

Upstream 100 bases:

>100_bases
CGGAAAAACCGCGCAGACAGGTCGATCGTAGACATGCCATCACACGTCTGAACACACTTCTGATTGAGCAACCAGAACAG
GCGGCTCAGGAGGTTCGCCC

Downstream 100 bases:

>100_bases
GAGCCCACCATGTTCGATGCAATGACCGATGCGGTCACTCAGGATATGAGCAAGATTCTACAGACCAAGGCGGCGGATCT
GTCCGGCGAGCGGCTGCGCA

Product: HrpD5 protein

Products: NA

Alternate protein names: HrpD5 Protein; HRPW Transmembrane Protein; Type III Secretion -Like Protein; Type III Secretion Apparatus Protein

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSSDTLPETSFVAFQPVRFGPLVLC
VGDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVGAVLALAAAALLPSLQPAFLSDAAARQHPETAVNQAKGLLK
QLGFREAHVAQVGTRVLIEGLVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSVSGS
SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGTKHMTSLPQQAAQ

Sequences:

>Translated_312_residues
MTMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSSDTLPETSFVAFQPVRFGPLVLC
VGDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVGAVLALAAAALLPSLQPAFLSDAAARQHPETAVNQAKGLLK
QLGFREAHVAQVGTRVLIEGLVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSVSGS
SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGTKHMTSLPQQAAQ
>Mature_311_residues
TMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSSDTLPETSFVAFQPVRFGPLVLCV
GDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVGAVLALAAAALLPSLQPAFLSDAAARQHPETAVNQAKGLLKQ
LGFREAHVAQVGTRVLIEGLVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSVSGSS
DYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGTKHMTSLPQQAAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33390; Mature: 33259

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSSDT
CCEEEEEEECCCCCCEEEECCCCEECCCCCCCCEEEECCCCCEEEEEECCCCCEEECCCC
LPETSFVAFQPVRFGPLVLCVGDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVG
CCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AVLALAAAALLPSLQPAFLSDAAARQHPETAVNQAKGLLKQLGFREAHVAQVGTRVLIEG
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
LVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSVSGS
CCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCC
SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGT
CHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCEEEECCCCC
KHMTSLPQQAAQ
HHHHHHHHHHCC
>Mature Secondary Structure 
TMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSSDT
CEEEEEEECCCCCCEEEECCCCEECCCCCCCCEEEECCCCCEEEEEECCCCCEEECCCC
LPETSFVAFQPVRFGPLVLCVGDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVG
CCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AVLALAAAALLPSLQPAFLSDAAARQHPETAVNQAKGLLKQLGFREAHVAQVGTRVLIEG
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
LVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSVSGS
CCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCC
SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGT
CHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCEEEECCCCC
KHMTSLPQQAAQ
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA