| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621754
Identifier: 84621754
GI number: 84621754
Start: 101927
End: 102754
Strand: Direct
Name: 84621754
Synonym: XOO_0097
Alternate gene names: NA
Gene position: 101927-102754 (Clockwise)
Preceding gene: 84621753
Following gene: 84621755
Centisome position: 2.06
GC content: 63.41
Gene sequence:
>828_bases ATGATCCGTCGCATCTCGCCCGGTCCCTTGCAGCCCTCGGTTTCCACCGAGCATGGCGGCTCGCATCACCATGCCGATCA CCATGCCGATGCGGCAAGCACCAGCGCAGGGTCGCCTGCCGACATTGCGGCAAGAGCAACCCGTCTGCGCCCTGCTCCAC CGCGCAGGCGACGACGCGGGAACCGGTCGCTGGACGGCCACGAGGATGAATTCGACGCCAACGAGCAGGAAGAGATCGAA GCCAAACGCGAGTGCGCACTGCGCGGACGGGTGAGCGTGGCGATCGCTCCGGCCCAGAGCCGGGAGCATGGCCAGAGCGA CCAGCACGGCGGTGACCGCAACACGCATACCGACGACACGCAGGCCGGTCCGTGGCACGGTGGCGCTCCAAGGCAGGTGA CCGACAGCATACGCACGTGCATCGACGCGATTCTCAATCGCTACGTGGCCAGGCGCGACGCCGATCCAGTGGCCAAGCGA GACGCGCTGGCTGCTGCGCTTGTCGAACTGCGCGCCATCGGCGTTTCGCATCCTGCCGTCGCCCCGTTGACTGAGACGGT CTGGAGGTTGATGCGCGAGCATCTGAGCTCGTACGACAAGGCCACCGCGGCGGAAAACCTGCAGACCTTGCGGACCCGAT TACTGGAGTTGATGCCATCCGAGTTGGAACCGGTGCCAGCGCTACGCAATTTTCATCTACTGCTTCCACTGATATTGCTG AATGCGGAAAAACCGCGCAGACAGGTCGATCGTAGACATGCCATCACACGTCTGAACACACTTCTGATTGAGCAACCAGA ACAGGCGGCTCAGGAGGTTCGCCCATGA
Upstream 100 bases:
>100_bases TCAAGCTGGTGGTGGTGGTGGCCGCCATTGCCGTGACAGCGCCGTGGGGTGCCTCGGCCATCATGCAGTTCGGTCAGGCA TTGATGCAGGCGGCGTTCCC
Downstream 100 bases:
>100_bases CCATGCAGCTTCGCGTACTGACAGGAACCCACGCAGGCGCACGATTAGATTTGGCACCAGGTCGCTACACCCTGGGGAGT GATCCCCAAACCGATATACG
Product: HpaA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRGNRSLDGHEDEFDANEQEEIE AKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDTQAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKR DALAAALVELRAIGVSHPAVAPLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP
Sequences:
>Translated_275_residues MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRGNRSLDGHEDEFDANEQEEIE AKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDTQAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKR DALAAALVELRAIGVSHPAVAPLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP >Mature_275_residues MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRGNRSLDGHEDEFDANEQEEIE AKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDTQAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKR DALAAALVELRAIGVSHPAVAPLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30464; Mature: 30464
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHCC NRSLDGHEDEFDANEQEEIEAKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCC QAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKRDALAAALVELRAIGVSHPAV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCH APLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHCC NRSLDGHEDEFDANEQEEIEAKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCC QAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKRDALAAALVELRAIGVSHPAV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCH APLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA