Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84621754

Identifier: 84621754

GI number: 84621754

Start: 101927

End: 102754

Strand: Direct

Name: 84621754

Synonym: XOO_0097

Alternate gene names: NA

Gene position: 101927-102754 (Clockwise)

Preceding gene: 84621753

Following gene: 84621755

Centisome position: 2.06

GC content: 63.41

Gene sequence:

>828_bases
ATGATCCGTCGCATCTCGCCCGGTCCCTTGCAGCCCTCGGTTTCCACCGAGCATGGCGGCTCGCATCACCATGCCGATCA
CCATGCCGATGCGGCAAGCACCAGCGCAGGGTCGCCTGCCGACATTGCGGCAAGAGCAACCCGTCTGCGCCCTGCTCCAC
CGCGCAGGCGACGACGCGGGAACCGGTCGCTGGACGGCCACGAGGATGAATTCGACGCCAACGAGCAGGAAGAGATCGAA
GCCAAACGCGAGTGCGCACTGCGCGGACGGGTGAGCGTGGCGATCGCTCCGGCCCAGAGCCGGGAGCATGGCCAGAGCGA
CCAGCACGGCGGTGACCGCAACACGCATACCGACGACACGCAGGCCGGTCCGTGGCACGGTGGCGCTCCAAGGCAGGTGA
CCGACAGCATACGCACGTGCATCGACGCGATTCTCAATCGCTACGTGGCCAGGCGCGACGCCGATCCAGTGGCCAAGCGA
GACGCGCTGGCTGCTGCGCTTGTCGAACTGCGCGCCATCGGCGTTTCGCATCCTGCCGTCGCCCCGTTGACTGAGACGGT
CTGGAGGTTGATGCGCGAGCATCTGAGCTCGTACGACAAGGCCACCGCGGCGGAAAACCTGCAGACCTTGCGGACCCGAT
TACTGGAGTTGATGCCATCCGAGTTGGAACCGGTGCCAGCGCTACGCAATTTTCATCTACTGCTTCCACTGATATTGCTG
AATGCGGAAAAACCGCGCAGACAGGTCGATCGTAGACATGCCATCACACGTCTGAACACACTTCTGATTGAGCAACCAGA
ACAGGCGGCTCAGGAGGTTCGCCCATGA

Upstream 100 bases:

>100_bases
TCAAGCTGGTGGTGGTGGTGGCCGCCATTGCCGTGACAGCGCCGTGGGGTGCCTCGGCCATCATGCAGTTCGGTCAGGCA
TTGATGCAGGCGGCGTTCCC

Downstream 100 bases:

>100_bases
CCATGCAGCTTCGCGTACTGACAGGAACCCACGCAGGCGCACGATTAGATTTGGCACCAGGTCGCTACACCCTGGGGAGT
GATCCCCAAACCGATATACG

Product: HpaA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRGNRSLDGHEDEFDANEQEEIE
AKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDTQAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKR
DALAAALVELRAIGVSHPAVAPLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL
NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP

Sequences:

>Translated_275_residues
MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRGNRSLDGHEDEFDANEQEEIE
AKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDTQAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKR
DALAAALVELRAIGVSHPAVAPLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL
NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP
>Mature_275_residues
MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRGNRSLDGHEDEFDANEQEEIE
AKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDTQAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKR
DALAAALVELRAIGVSHPAVAPLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL
NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30464; Mature: 30464

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHCC
NRSLDGHEDEFDANEQEEIEAKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCC
QAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKRDALAAALVELRAIGVSHPAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
APLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MIRRISPGPLQPSVSTEHGGSHHHADHHADAASTSAGSPADIAARATRLRPAPPRRRRRG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHCC
NRSLDGHEDEFDANEQEEIEAKRECALRGRVSVAIAPAQSREHGQSDQHGGDRNTHTDDT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCC
QAGPWHGGAPRQVTDSIRTCIDAILNRYVARRDADPVAKRDALAAALVELRAIGVSHPAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
APLTETVWRLMREHLSSYDKATAAENLQTLRTRLLELMPSELEPVPALRNFHLLLPLILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
NAEKPRRQVDRRHAITRLNTLLIEQPEQAAQEVRP
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA