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The map label for this gene is 84621753

Identifier: 84621753

GI number: 84621753

Start: 101670

End: 101930

Strand: Direct

Name: 84621753

Synonym: XOO_0096

Alternate gene names: NA

Gene position: 101670-101930 (Clockwise)

Preceding gene: 84621752

Following gene: 84621754

Centisome position: 2.06

GC content: 62.45

Gene sequence:

>261_bases
ATGGACCACGACGATCTAGTGCGATTTACCTCCGAAGCCTTGCTGCTCTGCCTAAAGGTGTCCTTGCCGGTGGTCGGTGT
CGCTGCGCTGACCGGGCTGCTGATCGCCTTCGTCCAGGCAGTGATGTCGCTGCAGGACGCATCGATCTCGTTCGCGCTCA
AGCTGGTGGTGGTGGTGGCCGCCATTGCCGTGACAGCGCCGTGGGGTGCCTCGGCCATCATGCAGTTCGGTCAGGCATTG
ATGCAGGCGGCGTTCCCATGA

Upstream 100 bases:

>100_bases
CCGACCAATGTGGCGATCCCGTTCAAGCTGCTGCTGTTTGTCGCTATGGACGGCTGGTCGATGCTGATTCATGGCCTGGT
TCTGAGCTATCGGTGACGCC

Downstream 100 bases:

>100_bases
TCCGTCGCATCTCGCCCGGTCCCTTGCAGCCCTCGGTTTCCACCGAGCATGGCGGCTCGCATCACCATGCCGATCACCAT
GCCGATGCGGCAAGCACCAG

Product: HrcS protein

Products: NA

Alternate protein names: Type III Secretion-Associated Protein; Type III Secretion Protein HrcS; Type III Secretion Protein HrpO Family; Type III Secretion Inner Membrane Protein SctS; Type III Secretory Pathway Component EscS

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MDHDDLVRFTSEALLLCLKVSLPVVGVAALTGLLIAFVQAVMSLQDASISFALKLVVVVAAIAVTAPWGASAIMQFGQAL
MQAAFP

Sequences:

>Translated_86_residues
MDHDDLVRFTSEALLLCLKVSLPVVGVAALTGLLIAFVQAVMSLQDASISFALKLVVVVAAIAVTAPWGASAIMQFGQAL
MQAAFP
>Mature_86_residues
MDHDDLVRFTSEALLLCLKVSLPVVGVAALTGLLIAFVQAVMSLQDASISFALKLVVVVAAIAVTAPWGASAIMQFGQAL
MQAAFP

Specific function: Unknown

COG id: COG4794

COG function: function code U; Type III secretory pathway, component EscS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8944; Mature: 8944

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHDDLVRFTSEALLLCLKVSLPVVGVAALTGLLIAFVQAVMSLQDASISFALKLVVVVA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAVTAPWGASAIMQFGQALMQAAFP
HHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDHDDLVRFTSEALLLCLKVSLPVVGVAALTGLLIAFVQAVMSLQDASISFALKLVVVVA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAVTAPWGASAIMQFGQALMQAAFP
HHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA