| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621738
Identifier: 84621738
GI number: 84621738
Start: 87450
End: 87869
Strand: Direct
Name: 84621738
Synonym: XOO_0081
Alternate gene names: NA
Gene position: 87450-87869 (Clockwise)
Preceding gene: 84621736
Following gene: 84621748
Centisome position: 1.77
GC content: 60.48
Gene sequence:
>420_bases ATGAATTCTTTGAACACACAATTCGGCGGCAGCACGTCCAACCTTCAGGTTGGCCCAAGCCAGGACACAACGTTCGGTTC GAACCAGGGCGGCAACCAGGGCATCTCGGAAAAGCAACTGGACCAGTTGCTGTGCCAGCTCATCTCGGCCCTGCTTCAGT CGAGCAAAAATGCTGAGGAGGGTAAGGGTCAGGGTGGCGATAATGGCGGTGGCCAGGGCGGCAATTCGCAGCAGGCCGGG CAGCAGAATGGCCCCTCGCCATTCACCCAGATGCTGATGCATATCGTCGGAGAGATTCTCCAGGCGCAGAATGGTGGTGG TGCTGGTGGCGGCGGGTTCGGCGGCGGGTTCGGCGGTGACTTTAGTGGCGACCTCGGCCTCGGCACCAACCTCTCGAGCG ACAGCGCATCGATGCAGTAA
Upstream 100 bases:
>100_bases GTTTGATCGGGGCGCAAAACGCGCCTCGCAGCCACCGCTGTCTAGGCACGGCTGTTGATACTAAAGACACATACCATTTA ATCAGAGAGGAATCGTCACG
Downstream 100 bases:
>100_bases AGAACTGTTGGTCGCCCCTACCGGCCACGGCCTGCAGGTTGCCGCTTCATGCGGCAGCCTACGGGTTCATTCGTTCCTGT AACCGTGAACATGCGCTACC
Product: Hpa1-like protein
Products: NA
Alternate protein names: Hpa1 Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEEGKGQGGDNGGGQGGNSQQAG QQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGDFSGDLGLGTNLSSDSASMQ
Sequences:
>Translated_139_residues MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEEGKGQGGDNGGGQGGNSQQAG QQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGDFSGDLGLGTNLSSDSASMQ >Mature_139_residues MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEEGKGQGGDNGGGQGGNSQQAG QQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGDFSGDLGLGTNLSSDSASMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13727; Mature: 13727
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEE CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GKGQGGDNGGGQGGNSQQAGQQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FSGDLGLGTNLSSDSASMQ CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEE CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GKGQGGDNGGGQGGNSQQAGQQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FSGDLGLGTNLSSDSASMQ CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA