| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621736
Identifier: 84621736
GI number: 84621736
Start: 85028
End: 86047
Strand: Direct
Name: 84621736
Synonym: XOO_0079
Alternate gene names: NA
Gene position: 85028-86047 (Clockwise)
Preceding gene: 84621733
Following gene: 84621738
Centisome position: 1.72
GC content: 62.06
Gene sequence:
>1020_bases GTGCACCAGACCACCTCCGTGGGTCCAACCACGTTCGTGCGCGAGTTGATAGGCGAAGCGATGTTTGCCGCGTTTCGCCA CCTCCCACCCGAAGCGGTCGTCGCCATGCAGGCGGTGTCGGGCACGCTGCATCTGGCGCTGCATACGCTGCGGCGCAACC GCGAGAACCGCAATCCGGACGCCGCCGCCCGAGGCTTTCACAACCTTAATCTTGAACAGTGGGAAGCGCTGTCCGAAGAC GAACGTCATCACAAGAGGGGCGAGCAGCAACATTATTCGGATCTGGTCACCCGGCTCGCGCTGACCGGCATCTTGAGCAA TATCGCCATCGGCGCTGCAGGCAAGGCTCATGGCAGACCGGAGATGGCGGCCAGGCTGCTGACCAGTGAGCTCAAGGTCG CCCCTTATGCAGCGGCCCGCGATGCCATCCAGGCGACATTCCGCATGGTGGGAACGCGGGCGCCGACCAACGGTGGCGTT AGCGATCCACACGTCACCAGTGCAGGCAGGTTTTACGGCATTGCCAACATCCTGACCAACCTGGCATCGAATGAGCTGGA GGCACCAGACTTTGCATCGGCCAGGCAACGCTGGGCAGGATTGTTGTCGCCCTTCAACATTGGAGATGCGACCAGGATTG TCTTTCAGCAAGCGGCGGTGAACGCGGCCTTGAATGTCGCTCTGGAGACAGCCGACTGGCTCAGTGTCACCCAACACGAA GCCGACGAAGCCGGTACGCAGCAGATCTGGGAACCAGCCTGGAAGGCCAAGCGCGAGGACTATGAGCGGATCATGGATCA TTCTGTCGCGCGCACGGCCGCCATCAATTCCAACATCGCCTTTGGTACAGCAGTCAACATGATTGGCACCTGGCTCGGTT TGCCGCCAGCACGCAGCGCACTGCTCTCCAATACGTTGGCGGGCGTGGCCGCCGGCATGCAGTACAAGGTCATTGCCGGC ACCTGGCAGGCTGCAGCGGCAGTTCGCGAAGCCGAGGCCGCTCGCGCGCAAACCGAGTAA
Upstream 100 bases:
>100_bases CCTCTGTAGACCCACCGCGACTGCGGTCGCAGCGGCGACGCGCGGCATCATACCGATCAGCTTCGACAAACAATACCTGG GCGCTGCGCTGGGACATCTC
Downstream 100 bases:
>100_bases GCGGGACAGTGCTTCGCGCCGGCTCTCGCGCAGCCATCGGTTAGTGCAGCAACAGGTGGTCACACACGCACTGTCGGTTC ACCGGCAGTGCGCGTGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MHQTTSVGPTTFVRELIGEAMFAAFRHLPPEAVVAMQAVSGTLHLALHTLRRNRENRNPDAAARGFHNLNLEQWEALSED ERHHKRGEQQHYSDLVTRLALTGILSNIAIGAAGKAHGRPEMAARLLTSELKVAPYAAARDAIQATFRMVGTRAPTNGGV SDPHVTSAGRFYGIANILTNLASNELEAPDFASARQRWAGLLSPFNIGDATRIVFQQAAVNAALNVALETADWLSVTQHE ADEAGTQQIWEPAWKAKREDYERIMDHSVARTAAINSNIAFGTAVNMIGTWLGLPPARSALLSNTLAGVAAGMQYKVIAG TWQAAAAVREAEAARAQTE
Sequences:
>Translated_339_residues MHQTTSVGPTTFVRELIGEAMFAAFRHLPPEAVVAMQAVSGTLHLALHTLRRNRENRNPDAAARGFHNLNLEQWEALSED ERHHKRGEQQHYSDLVTRLALTGILSNIAIGAAGKAHGRPEMAARLLTSELKVAPYAAARDAIQATFRMVGTRAPTNGGV SDPHVTSAGRFYGIANILTNLASNELEAPDFASARQRWAGLLSPFNIGDATRIVFQQAAVNAALNVALETADWLSVTQHE ADEAGTQQIWEPAWKAKREDYERIMDHSVARTAAINSNIAFGTAVNMIGTWLGLPPARSALLSNTLAGVAAGMQYKVIAG TWQAAAAVREAEAARAQTE >Mature_339_residues MHQTTSVGPTTFVRELIGEAMFAAFRHLPPEAVVAMQAVSGTLHLALHTLRRNRENRNPDAAARGFHNLNLEQWEALSED ERHHKRGEQQHYSDLVTRLALTGILSNIAIGAAGKAHGRPEMAARLLTSELKVAPYAAARDAIQATFRMVGTRAPTNGGV SDPHVTSAGRFYGIANILTNLASNELEAPDFASARQRWAGLLSPFNIGDATRIVFQQAAVNAALNVALETADWLSVTQHE ADEAGTQQIWEPAWKAKREDYERIMDHSVARTAAINSNIAFGTAVNMIGTWLGLPPARSALLSNTLAGVAAGMQYKVIAG TWQAAAAVREAEAARAQTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36611; Mature: 36611
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQTTSVGPTTFVRELIGEAMFAAFRHLPPEAVVAMQAVSGTLHLALHTLRRNRENRNPD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AAARGFHNLNLEQWEALSEDERHHKRGEQQHYSDLVTRLALTGILSNIAIGAAGKAHGRP HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EMAARLLTSELKVAPYAAARDAIQATFRMVGTRAPTNGGVSDPHVTSAGRFYGIANILTN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LASNELEAPDFASARQRWAGLLSPFNIGDATRIVFQQAAVNAALNVALETADWLSVTQHE HHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADEAGTQQIWEPAWKAKREDYERIMDHSVARTAAINSNIAFGTAVNMIGTWLGLPPARSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH LLSNTLAGVAAGMQYKVIAGTWQAAAAVREAEAARAQTE HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHQTTSVGPTTFVRELIGEAMFAAFRHLPPEAVVAMQAVSGTLHLALHTLRRNRENRNPD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AAARGFHNLNLEQWEALSEDERHHKRGEQQHYSDLVTRLALTGILSNIAIGAAGKAHGRP HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH EMAARLLTSELKVAPYAAARDAIQATFRMVGTRAPTNGGVSDPHVTSAGRFYGIANILTN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LASNELEAPDFASARQRWAGLLSPFNIGDATRIVFQQAAVNAALNVALETADWLSVTQHE HHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADEAGTQQIWEPAWKAKREDYERIMDHSVARTAAINSNIAFGTAVNMIGTWLGLPPARSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH LLSNTLAGVAAGMQYKVIAGTWQAAAAVREAEAARAQTE HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA