Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84621738

Identifier: 84621738

GI number: 84621738

Start: 87450

End: 87869

Strand: Direct

Name: 84621738

Synonym: XOO_0081

Alternate gene names: NA

Gene position: 87450-87869 (Clockwise)

Preceding gene: 84621736

Following gene: 84621748

Centisome position: 1.77

GC content: 60.48

Gene sequence:

>420_bases
ATGAATTCTTTGAACACACAATTCGGCGGCAGCACGTCCAACCTTCAGGTTGGCCCAAGCCAGGACACAACGTTCGGTTC
GAACCAGGGCGGCAACCAGGGCATCTCGGAAAAGCAACTGGACCAGTTGCTGTGCCAGCTCATCTCGGCCCTGCTTCAGT
CGAGCAAAAATGCTGAGGAGGGTAAGGGTCAGGGTGGCGATAATGGCGGTGGCCAGGGCGGCAATTCGCAGCAGGCCGGG
CAGCAGAATGGCCCCTCGCCATTCACCCAGATGCTGATGCATATCGTCGGAGAGATTCTCCAGGCGCAGAATGGTGGTGG
TGCTGGTGGCGGCGGGTTCGGCGGCGGGTTCGGCGGTGACTTTAGTGGCGACCTCGGCCTCGGCACCAACCTCTCGAGCG
ACAGCGCATCGATGCAGTAA

Upstream 100 bases:

>100_bases
GTTTGATCGGGGCGCAAAACGCGCCTCGCAGCCACCGCTGTCTAGGCACGGCTGTTGATACTAAAGACACATACCATTTA
ATCAGAGAGGAATCGTCACG

Downstream 100 bases:

>100_bases
AGAACTGTTGGTCGCCCCTACCGGCCACGGCCTGCAGGTTGCCGCTTCATGCGGCAGCCTACGGGTTCATTCGTTCCTGT
AACCGTGAACATGCGCTACC

Product: Hpa1-like protein

Products: NA

Alternate protein names: Hpa1 Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEEGKGQGGDNGGGQGGNSQQAG
QQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGDFSGDLGLGTNLSSDSASMQ

Sequences:

>Translated_139_residues
MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEEGKGQGGDNGGGQGGNSQQAG
QQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGDFSGDLGLGTNLSSDSASMQ
>Mature_139_residues
MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEEGKGQGGDNGGGQGGNSQQAG
QQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGDFSGDLGLGTNLSSDSASMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13727; Mature: 13727

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEE
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GKGQGGDNGGGQGGNSQQAGQQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FSGDLGLGTNLSSDSASMQ
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEE
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GKGQGGDNGGGQGGNSQQAGQQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FSGDLGLGTNLSSDSASMQ
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA