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The map label for this gene is 84490347

Identifier: 84490347

GI number: 84490347

Start: 1745615

End: 1746742

Strand: Direct

Name: 84490347

Synonym: Msp_1569

Alternate gene names: NA

Gene position: 1745615-1746742 (Clockwise)

Preceding gene: 84490343

Following gene: 84490355

Centisome position: 98.77

GC content: 29.17

Gene sequence:

>1128_bases
ATGAGTACTTTTCAAGATTTACAGCTTTTATCAGATGCAGCATATTATGATAGATGTAACTATGTTAATTATAATGTAGA
TAACATTCTCAAAGAAACTGATAAACTTAAAGATGGAATATACCATGCAAAGGCGGGAAATAGAGAAGTACCTTTATTTA
AAATATTAATGACCAATCAATGTAATAATGATTGTGCATACTGTACCAACTGTATGAAACATAAGTACCAAAGAGCCCAT
ATTGGTCCTGATGCTCTTGCACGTATATATATGCAGTATTATGAGAATAATATTGTTGAAGGCATATTTTTAAGTTCTGG
AATTATAAAAGATGCTGATAGAACTATGGAAGAGATGAATCATGCAGCATATCTTCTTAGAAATAAATACTCCTATAAGG
GTTATATTCATCTTAAAGTAATTCCTGGAGCAAGTAAAGATCATATAAAACATGCAATGCAACTAGCAGACAGAGTAAGT
ATCAACATTGAAGCTGCTACAAAGGATGGATTAAGTGATTTATCAAGTACAAAAAACTACGATAAAGACATACTCAAACG
CTTAGATTGGATTGATAGACTCCATAAAAAAAATCATAGTCTGGCAAGTAGTGGACATACAACCCAGATTATTGTTGGTG
CTAACGAAGAAAATGATGAAGATATATTAAATAGAATAGATTATCTTAAAAAGAAATACAACGTTCTTTATAACTATTTC
AGTAGTTTTAGACCAATAAAGGGAACACCTCTTGAAAATCATGAAGCATGTGATAATAAACGAACAGGAAGATTATATCA
AATGGAATATCTTTTTTCAAAGTATAATTTTACAAAAAAAGATATTGTTTTAGATGATAATGGATTTTTAGATTTAAATA
ACGATCCAAAATACAATATTGCATTAGAAAATATGGATAAATACCCCCTTGATGTAAATACTGCTAAATACAAAGAATTA
ATTAAAGTTCCAGGTATTGGATTAAAATCAGCACGACGTATAACCCATCTTCAAAAAATAGGACGTAAAATAAATAATTT
AAAACAGTTACAAGAGCTTGGTGTCAATATTAACCAATGTAAAATATTTGTTAAAGTTGGTGGCTCATATCAAAGTACAC
TACTATAA

Upstream 100 bases:

>100_bases
TTATTAATAGATTAATATTTTATTTCTAAGAATTAATATAAAAAGTTTCTTTAATAAAAAAGATTAAAGTAGTTTATAAT
AAAAAAAGGAGAAATAGCAT

Downstream 100 bases:

>100_bases
AAAAAGATAATACAAGTAACAATCTATGTTACTCTCCAGTATAAGTTTTAATCTAAAAAAAACTTATGGGATATAATTAT
GTTAAATTTTTTAGATTATA

Product: DNA-binding protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSTFQDLQLLSDAAYYDRCNYVNYNVDNILKETDKLKDGIYHAKAGNREVPLFKILMTNQCNNDCAYCTNCMKHKYQRAH
IGPDALARIYMQYYENNIVEGIFLSSGIIKDADRTMEEMNHAAYLLRNKYSYKGYIHLKVIPGASKDHIKHAMQLADRVS
INIEAATKDGLSDLSSTKNYDKDILKRLDWIDRLHKKNHSLASSGHTTQIIVGANEENDEDILNRIDYLKKKYNVLYNYF
SSFRPIKGTPLENHEACDNKRTGRLYQMEYLFSKYNFTKKDIVLDDNGFLDLNNDPKYNIALENMDKYPLDVNTAKYKEL
IKVPGIGLKSARRITHLQKIGRKINNLKQLQELGVNINQCKIFVKVGGSYQSTLL

Sequences:

>Translated_375_residues
MSTFQDLQLLSDAAYYDRCNYVNYNVDNILKETDKLKDGIYHAKAGNREVPLFKILMTNQCNNDCAYCTNCMKHKYQRAH
IGPDALARIYMQYYENNIVEGIFLSSGIIKDADRTMEEMNHAAYLLRNKYSYKGYIHLKVIPGASKDHIKHAMQLADRVS
INIEAATKDGLSDLSSTKNYDKDILKRLDWIDRLHKKNHSLASSGHTTQIIVGANEENDEDILNRIDYLKKKYNVLYNYF
SSFRPIKGTPLENHEACDNKRTGRLYQMEYLFSKYNFTKKDIVLDDNGFLDLNNDPKYNIALENMDKYPLDVNTAKYKEL
IKVPGIGLKSARRITHLQKIGRKINNLKQLQELGVNINQCKIFVKVGGSYQSTLL
>Mature_374_residues
STFQDLQLLSDAAYYDRCNYVNYNVDNILKETDKLKDGIYHAKAGNREVPLFKILMTNQCNNDCAYCTNCMKHKYQRAHI
GPDALARIYMQYYENNIVEGIFLSSGIIKDADRTMEEMNHAAYLLRNKYSYKGYIHLKVIPGASKDHIKHAMQLADRVSI
NIEAATKDGLSDLSSTKNYDKDILKRLDWIDRLHKKNHSLASSGHTTQIIVGANEENDEDILNRIDYLKKKYNVLYNYFS
SFRPIKGTPLENHEACDNKRTGRLYQMEYLFSKYNFTKKDIVLDDNGFLDLNNDPKYNIALENMDKYPLDVNTAKYKELI
KVPGIGLKSARRITHLQKIGRKINNLKQLQELGVNINQCKIFVKVGGSYQSTLL

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43317; Mature: 43186

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFQDLQLLSDAAYYDRCNYVNYNVDNILKETDKLKDGIYHAKAGNREVPLFKILMTNQ
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCEEEEEECCC
CNNDCAYCTNCMKHKYQRAHIGPDALARIYMQYYENNIVEGIFLSSGIIKDADRTMEEMN
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEHHHCCCCHHHHHHHHHHHH
HAAYLLRNKYSYKGYIHLKVIPGASKDHIKHAMQLADRVSINIEAATKDGLSDLSSTKNY
HHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCC
DKDILKRLDWIDRLHKKNHSLASSGHTTQIIVGANEENDEDILNRIDYLKKKYNVLYNYF
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SSFRPIKGTPLENHEACDNKRTGRLYQMEYLFSKYNFTKKDIVLDDNGFLDLNNDPKYNI
HHCCCCCCCCCCCCHHCCCCCCCCEEHHHHHHHHCCCCCCCEEECCCCEEECCCCCCEEE
ALENMDKYPLDVNTAKYKELIKVPGIGLKSARRITHLQKIGRKINNLKQLQELGVNINQC
EECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
KIFVKVGGSYQSTLL
EEEEEECCCHHHHCC
>Mature Secondary Structure 
STFQDLQLLSDAAYYDRCNYVNYNVDNILKETDKLKDGIYHAKAGNREVPLFKILMTNQ
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCEEEEEECCC
CNNDCAYCTNCMKHKYQRAHIGPDALARIYMQYYENNIVEGIFLSSGIIKDADRTMEEMN
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEHHHCCCCHHHHHHHHHHHH
HAAYLLRNKYSYKGYIHLKVIPGASKDHIKHAMQLADRVSINIEAATKDGLSDLSSTKNY
HHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCC
DKDILKRLDWIDRLHKKNHSLASSGHTTQIIVGANEENDEDILNRIDYLKKKYNVLYNYF
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SSFRPIKGTPLENHEACDNKRTGRLYQMEYLFSKYNFTKKDIVLDDNGFLDLNNDPKYNI
HHCCCCCCCCCCCCHHCCCCCCCCEEHHHHHHHHCCCCCCCEEECCCCEEECCCCCCEEE
ALENMDKYPLDVNTAKYKELIKVPGIGLKSARRITHLQKIGRKINNLKQLQELGVNINQC
EECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
KIFVKVGGSYQSTLL
EEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA