| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84490299
Identifier: 84490299
GI number: 84490299
Start: 1701855
End: 1702382
Strand: Direct
Name: 84490299
Synonym: Msp_1519
Alternate gene names: NA
Gene position: 1701855-1702382 (Clockwise)
Preceding gene: 84490292
Following gene: 84490300
Centisome position: 96.29
GC content: 29.55
Gene sequence:
>528_bases ATGGATTTAGAAGCAGTACTTGATGTAATTGGCTGCAAAACAAGACGAGATATATTAGCATTACTTACAGAAGAACCACG TTTTGTAAGTCAAATATCACAACAACTAAATATAGGCCAAAAAGCAATCATAGGTCACTTGAAAGCTATGGAAGATCTTG GACTTATAAACCCATCATACAAAAAAATAGAAAGGGGACGACCAAGAAAATATTATGAAATATCCCAAGATATAGAAATA AAAATATTCATAAAACCAGACACTATCAATATGCACATGATGGGTGAGGAATTTACAGAATTATATAATATAGAAGAAAG ATTATATATGGGAGATCATGAAGCAATAGAAGACCTAAGAACCATAATAGGAAAATATAAAAATGCTCTAAGATATGCTG AAGAATTATTAAGTCAAGTTGAAAACCCTGAAAAACACAAAACAAAAACTATAATCACTGATATCACACAGACAAAAGCA ATACCTGAAGTTAAAATAGACCAACTAAAAAATTTATATAACAAATAA
Upstream 100 bases:
>100_bases AGTACTATATAAATGTTTGGATATTTTAGTAACCTTAGGTAATATTTATATATTTACATGAATATAATAATAAGTAGGTA AAAAATAAGAAGATGATAAT
Downstream 100 bases:
>100_bases AATATATTTTAATATTATAAAGTATTATATTGATAAATGCTAAATAAAAAATAACTCTATAGGTGAAATAATGGATAAAA AAATAATATTATCTATTGTA
Product: transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Archaeal Heat Shock Regulator ArsR Family; Archaeal Heat Shock Regulator; Transcriptional Regulator Arsr Family; Transcriptional Regulator ArsR Family; ArS Family Heat Shock Protein; Heat Shock Regulator
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MDLEAVLDVIGCKTRRDILALLTEEPRFVSQISQQLNIGQKAIIGHLKAMEDLGLINPSYKKIERGRPRKYYEISQDIEI KIFIKPDTINMHMMGEEFTELYNIEERLYMGDHEAIEDLRTIIGKYKNALRYAEELLSQVENPEKHKTKTIITDITQTKA IPEVKIDQLKNLYNK
Sequences:
>Translated_175_residues MDLEAVLDVIGCKTRRDILALLTEEPRFVSQISQQLNIGQKAIIGHLKAMEDLGLINPSYKKIERGRPRKYYEISQDIEI KIFIKPDTINMHMMGEEFTELYNIEERLYMGDHEAIEDLRTIIGKYKNALRYAEELLSQVENPEKHKTKTIITDITQTKA IPEVKIDQLKNLYNK >Mature_175_residues MDLEAVLDVIGCKTRRDILALLTEEPRFVSQISQQLNIGQKAIIGHLKAMEDLGLINPSYKKIERGRPRKYYEISQDIEI KIFIKPDTINMHMMGEEFTELYNIEERLYMGDHEAIEDLRTIIGKYKNALRYAEELLSQVENPEKHKTKTIITDITQTKA IPEVKIDQLKNLYNK
Specific function: Unknown
COG id: COG1777
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20407; Mature: 20407
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLEAVLDVIGCKTRRDILALLTEEPRFVSQISQQLNIGQKAIIGHLKAMEDLGLINPSY CCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH KKIERGRPRKYYEISQDIEIKIFIKPDTINMHMMGEEFTELYNIEERLYMGDHEAIEDLR HHHHCCCCCCEEECCCCCEEEEEEECCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHH TIIGKYKNALRYAEELLSQVENPEKHKTKTIITDITQTKAIPEVKIDQLKNLYNK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MDLEAVLDVIGCKTRRDILALLTEEPRFVSQISQQLNIGQKAIIGHLKAMEDLGLINPSY CCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH KKIERGRPRKYYEISQDIEIKIFIKPDTINMHMMGEEFTELYNIEERLYMGDHEAIEDLR HHHHCCCCCCEEECCCCCEEEEEEECCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHH TIIGKYKNALRYAEELLSQVENPEKHKTKTIITDITQTKAIPEVKIDQLKNLYNK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA