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The map label for this gene is 84490300

Identifier: 84490300

GI number: 84490300

Start: 1702453

End: 1703286

Strand: Direct

Name: 84490300

Synonym: Msp_1520

Alternate gene names: NA

Gene position: 1702453-1703286 (Clockwise)

Preceding gene: 84490299

Following gene: 84490317

Centisome position: 96.33

GC content: 34.77

Gene sequence:

>834_bases
ATGGATAAAAAAATAATATTATCTATTGTAATAGTAGCCCTTATAGGAATAGTAGCAGCTACCTATCAAATTAATATAAA
TGATAATTTATTAAATCCATTAGCTAGTATAGAACAAGAAGATTCACCAGTGACAGATGCACTTGCAGCACCTGCATCAA
CTGGAGATTCATCAAATAGCCTAGATAATGGACCTCAAAATGCACAACAACAAACAGGACAACAAGCTACTGACGCTTCT
CAACAAGCAGGACAAAACAGTCAAAACAATAAAGATAACCAAGAAGGAACACAAAACAGTGCAACTAGTGGAAGTGCACT
TATAAGTTCTGACTCACCCATACTTGTTACTGAAAGCTCAAATAGCCAAGCAAATGGACAAAACCAAAATAATGGTGGAC
AAAGCAACCCAAATTCAAATAACAATCCAAGTAACAATCCTAATAATAACCCAAATCCAACACCAACACCAAGCCCAAGC
CCAAGTCCAACACCAAGTCCAACACCAAGTCCAACACCAAGTCCAAGTCCTGATACAACAATAACAATTAAACAAGCTCT
TACACATGTATTAAAAAATATAGATAGTTCTATAACAATAGATGAAAGTAGTGTTAGAACTCAAACTATAAACAATGAAG
AATGGTATGTATTTTCAGCTAAAAAAGAAGGTATATCCTTTAACTATTATGTATGTACAACCAAAGACGAAAATGGTAAT
ATCAGAATGTATAATGATTTAGATAATGCTGGACCAAATGAAACACCAACTCCTGGAACTGATCTATCAGATGATCCTAA
CGGAGATACTGGTGACGACTACAACCAAACATAA

Upstream 100 bases:

>100_bases
GACCAACTAAAAAATTTATATAACAAATAAAATATATTTTAATATTATAAAGTATTATATTGATAAATGCTAAATAAAAA
ATAACTCTATAGGTGAAATA

Downstream 100 bases:

>100_bases
AAATAATTCATAGGTAGATGCTTAAATTTCTAAAAGGATTTATTAAGACAATATTATTTATTTTTGAGATTAAGTAAAAT
CTCAAATTATACTTTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDKKIILSIVIVALIGIVAATYQININDNLLNPLASIEQEDSPVTDALAAPASTGDSSNSLDNGPQNAQQQTGQQATDAS
QQAGQNSQNNKDNQEGTQNSATSGSALISSDSPILVTESSNSQANGQNQNNGGQSNPNSNNNPSNNPNNNPNPTPTPSPS
PSPTPSPTPSPTPSPSPDTTITIKQALTHVLKNIDSSITIDESSVRTQTINNEEWYVFSAKKEGISFNYYVCTTKDENGN
IRMYNDLDNAGPNETPTPGTDLSDDPNGDTGDDYNQT

Sequences:

>Translated_277_residues
MDKKIILSIVIVALIGIVAATYQININDNLLNPLASIEQEDSPVTDALAAPASTGDSSNSLDNGPQNAQQQTGQQATDAS
QQAGQNSQNNKDNQEGTQNSATSGSALISSDSPILVTESSNSQANGQNQNNGGQSNPNSNNNPSNNPNNNPNPTPTPSPS
PSPTPSPTPSPTPSPSPDTTITIKQALTHVLKNIDSSITIDESSVRTQTINNEEWYVFSAKKEGISFNYYVCTTKDENGN
IRMYNDLDNAGPNETPTPGTDLSDDPNGDTGDDYNQT
>Mature_277_residues
MDKKIILSIVIVALIGIVAATYQININDNLLNPLASIEQEDSPVTDALAAPASTGDSSNSLDNGPQNAQQQTGQQATDAS
QQAGQNSQNNKDNQEGTQNSATSGSALISSDSPILVTESSNSQANGQNQNNGGQSNPNSNNNPSNNPNNNPNPTPTPSPS
PSPTPSPTPSPTPSPSPDTTITIKQALTHVLKNIDSSITIDESSVRTQTINNEEWYVFSAKKEGISFNYYVCTTKDENGN
IRMYNDLDNAGPNETPTPGTDLSDDPNGDTGDDYNQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29175; Mature: 29175

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKIILSIVIVALIGIVAATYQININDNLLNPLASIEQEDSPVTDALAAPASTGDSSNS
CCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
LDNGPQNAQQQTGQQATDASQQAGQNSQNNKDNQEGTQNSATSGSALISSDSPILVTESS
CCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCC
NSQANGQNQNNGGQSNPNSNNNPSNNPNNNPNPTPTPSPSPSPTPSPTPSPTPSPSPDTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
ITIKQALTHVLKNIDSSITIDESSVRTQTINNEEWYVFSAKKEGISFNYYVCTTKDENGN
EEHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCC
IRMYNDLDNAGPNETPTPGTDLSDDPNGDTGDDYNQT
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKKIILSIVIVALIGIVAATYQININDNLLNPLASIEQEDSPVTDALAAPASTGDSSNS
CCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
LDNGPQNAQQQTGQQATDASQQAGQNSQNNKDNQEGTQNSATSGSALISSDSPILVTESS
CCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCC
NSQANGQNQNNGGQSNPNSNNNPSNNPNNNPNPTPTPSPSPSPTPSPTPSPTPSPSPDTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
ITIKQALTHVLKNIDSSITIDESSVRTQTINNEEWYVFSAKKEGISFNYYVCTTKDENGN
EEHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCC
IRMYNDLDNAGPNETPTPGTDLSDDPNGDTGDDYNQT
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA