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The map label for this gene is trkA [H]

Identifier: 84490284

GI number: 84490284

Start: 1687386

End: 1688066

Strand: Direct

Name: trkA [H]

Synonym: Msp_1504

Alternate gene names: 84490284

Gene position: 1687386-1688066 (Clockwise)

Preceding gene: 84490280

Following gene: 84490287

Centisome position: 95.47

GC content: 27.75

Gene sequence:

>681_bases
ATGGAAGAAATAATCATAGTTGGTGGAGGAAGAGTTGGTATTCGCTTAATTGATCTTTTAAATAAACGTGAAGATTATCA
TATAACTCTTATTGATGATAATAAAAAAGCATTATCCTTAATTAAAGAAAAATATGAAACAGTGGATATTGTTCGGGGTA
ATGCTACAAATAAAACTGTGCTTGAAAATGCAGGTATTGAAAATGCTGATATCATTGTGGCTGCAACTAGTATTGATGAA
GTAAATCTACTTATTGGTATTTTATCTCAAGGATATCATCTGAAAAAAATAATTGCTAGAACTGCCAATCCATCACATAT
AAAGATGTTTAAAAAATTAGGACTAAATGAAGTAGTAAGTCCTGAACTTACAACTTGTATGGATATTCAAAAGTTAATTA
TCAATTCTCTTTCTGTTAAAATGTTAACAACAGGTTCTGATGATATGGAACTAGTAGAAATCACAGTCAAGTCCAGCAAA
GTTGTTGGTAAAGAAATAGGTCAAATTAGTCCATCAAAAGATTTCATCATAGTCTTATGTAACAAAAACAATGAAGATAT
TATAGCCCAAAATAATATTGTTTTATCAAAAGATGATAAGATAACAGTTCTTGTTAAATCAAATAAAATTAAAAAAGTTA
AAAAATATTTCACAAAAAGTGGTCTTCTTAGCTCAATATAA

Upstream 100 bases:

>100_bases
TATTATATAATATATGTCTTATTAATATAATAAAATTATAATTATTTAAGTAAATTCAAATATAATGTATAATTATATTC
ATAACAAAGAGATGTGATAA

Downstream 100 bases:

>100_bases
AAAAATAATAAAAGGAATTTATTGTGTTTATAAACGTGAAGCTAACATGACAGCTAATGATATTTGTTCAGTTACAGCTG
ATATTGCATATGGTCCATGA

Product: trk system potassium uptake TrkA-like protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MEEIIIVGGGRVGIRLIDLLNKREDYHITLIDDNKKALSLIKEKYETVDIVRGNATNKTVLENAGIENADIIVAATSIDE
VNLLIGILSQGYHLKKIIARTANPSHIKMFKKLGLNEVVSPELTTCMDIQKLIINSLSVKMLTTGSDDMELVEITVKSSK
VVGKEIGQISPSKDFIIVLCNKNNEDIIAQNNIVLSKDDKITVLVKSNKIKKVKKYFTKSGLLSSI

Sequences:

>Translated_226_residues
MEEIIIVGGGRVGIRLIDLLNKREDYHITLIDDNKKALSLIKEKYETVDIVRGNATNKTVLENAGIENADIIVAATSIDE
VNLLIGILSQGYHLKKIIARTANPSHIKMFKKLGLNEVVSPELTTCMDIQKLIINSLSVKMLTTGSDDMELVEITVKSSK
VVGKEIGQISPSKDFIIVLCNKNNEDIIAQNNIVLSKDDKITVLVKSNKIKKVKKYFTKSGLLSSI
>Mature_226_residues
MEEIIIVGGGRVGIRLIDLLNKREDYHITLIDDNKKALSLIKEKYETVDIVRGNATNKTVLENAGIENADIIVAATSIDE
VNLLIGILSQGYHLKKIIARTANPSHIKMFKKLGLNEVVSPELTTCMDIQKLIINSLSVKMLTTGSDDMELVEITVKSSK
VVGKEIGQISPSKDFIIVLCNKNNEDIIAQNNIVLSKDDKITVLVKSNKIKKVKKYFTKSGLLSSI

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=227, Percent_Identity=24.6696035242291, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24960; Mature: 24960

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIIIVGGGRVGIRLIDLLNKREDYHITLIDDNKKALSLIKEKYETVDIVRGNATNKTV
CCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHEEEEEECCCCCCEE
LENAGIENADIIVAATSIDEVNLLIGILSQGYHLKKIIARTANPSHIKMFKKLGLNEVVS
ECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCC
PELTTCMDIQKLIINSLSVKMLTTGSDDMELVEITVKSSKVVGKEIGQISPSKDFIIVLC
CCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHCCCCCCCCEEEEEE
NKNNEDIIAQNNIVLSKDDKITVLVKSNKIKKVKKYFTKSGLLSSI
CCCCCCEEEECCEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEEIIIVGGGRVGIRLIDLLNKREDYHITLIDDNKKALSLIKEKYETVDIVRGNATNKTV
CCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHEEEEEECCCCCCEE
LENAGIENADIIVAATSIDEVNLLIGILSQGYHLKKIIARTANPSHIKMFKKLGLNEVVS
ECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCC
PELTTCMDIQKLIINSLSVKMLTTGSDDMELVEITVKSSKVVGKEIGQISPSKDFIIVLC
CCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHCCCCCCCCEEEEEE
NKNNEDIIAQNNIVLSKDDKITVLVKSNKIKKVKKYFTKSGLLSSI
CCCCCCEEEECCEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]