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The map label for this gene is 84490166

Identifier: 84490166

GI number: 84490166

Start: 1553063

End: 1554010

Strand: Direct

Name: 84490166

Synonym: Msp_1383

Alternate gene names: NA

Gene position: 1553063-1554010 (Clockwise)

Preceding gene: 84490151

Following gene: 84490167

Centisome position: 87.87

GC content: 29.75

Gene sequence:

>948_bases
ATGATAATTTCACAAACAAAACAAAAAGATTTAGAAAAGAAAGGATATAGATTTGCAGGAAAAAATATTCATGCTGCAAA
TAAGATATGTCACTGGACAAGAAAAAGTATAGTAGATGAAGGAACATGTTATAAAGAACAATTCTATGGTATAAAAAGTC
ATAGATGTCTTCAAATGTCTCCAGCAATTGCATACTGCCAACATAAATGTTTATTCTGTTGGAGAGATACAGATATTACA
AAAACATCATGGGATAGTGATGACTATGATGATCCAAAAACAATAATTGAAGACTGTATTGAAAACCAGAAGAAATTACT
ATGTGGATTTTTTGGAAATGAAAATGCCAATCCAGAAAAATTAGAAGAATGTGTAAAACCAAATAATGCTGCATTAAGTC
TTGCAGGTGAACCATTACTTTATCCTGAAATTAATCAATTAATAGAAGAATTCCATAAACAGAATTTTACAACATTCCTT
GTAAGTAATGGTGAAAATCCAGATAAAATAGAAGCTCTTGGAAAACATGAACCAACACAACTATATATTTCATTAGATGC
ACCAAATAAGGAGATATATAAAAAGGTATGTAAACCACAAGTATCTAATGGATGGGAAAAATTACAAGAAAGTCTTGAAC
TTCTCTCAACAATTGATACAAGAAAAGTTCTTAGAATAACATCAGTAAAAGATTTGAATATGATACATACAGAGGAATAT
GCAAAGATTATTGAAAAGGCAGATGTTGATTACGTTGAAATAAAAGCATATATGTTTGTAGGTGATTCAAGAAATAGACT
TCAATGGGAAAATATGCCAAAAACTGTGGATATTCAGGAATTTGCACAATCCATCGCCGAAAAAACAAGTATGGATATTA
TTGATGAAGTTGAAAAAAGTAGAGTACTTCTACTTGGTGAGAAAAAACCAGGAAAGTATAATAACTAA

Upstream 100 bases:

>100_bases
AGATAGTTAAGAATCATTATAAATTCATAATATGAAAATAAATACAACACATTAATATAAATTAAATTTTTTAAGACACA
AAAAACATAAGATTATATTA

Downstream 100 bases:

>100_bases
AAAATAAATTATTATACTAAAGAGGTGAATAAAATATGTGGGGAAAAATCATAGGAATTATACTCATTATTTTTATAATA
GGTGGTTTTGTTGTACCAGT

Product: tRNA-modifying enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MIISQTKQKDLEKKGYRFAGKNIHAANKICHWTRKSIVDEGTCYKEQFYGIKSHRCLQMSPAIAYCQHKCLFCWRDTDIT
KTSWDSDDYDDPKTIIEDCIENQKKLLCGFFGNENANPEKLEECVKPNNAALSLAGEPLLYPEINQLIEEFHKQNFTTFL
VSNGENPDKIEALGKHEPTQLYISLDAPNKEIYKKVCKPQVSNGWEKLQESLELLSTIDTRKVLRITSVKDLNMIHTEEY
AKIIEKADVDYVEIKAYMFVGDSRNRLQWENMPKTVDIQEFAQSIAEKTSMDIIDEVEKSRVLLLGEKKPGKYNN

Sequences:

>Translated_315_residues
MIISQTKQKDLEKKGYRFAGKNIHAANKICHWTRKSIVDEGTCYKEQFYGIKSHRCLQMSPAIAYCQHKCLFCWRDTDIT
KTSWDSDDYDDPKTIIEDCIENQKKLLCGFFGNENANPEKLEECVKPNNAALSLAGEPLLYPEINQLIEEFHKQNFTTFL
VSNGENPDKIEALGKHEPTQLYISLDAPNKEIYKKVCKPQVSNGWEKLQESLELLSTIDTRKVLRITSVKDLNMIHTEEY
AKIIEKADVDYVEIKAYMFVGDSRNRLQWENMPKTVDIQEFAQSIAEKTSMDIIDEVEKSRVLLLGEKKPGKYNN
>Mature_315_residues
MIISQTKQKDLEKKGYRFAGKNIHAANKICHWTRKSIVDEGTCYKEQFYGIKSHRCLQMSPAIAYCQHKCLFCWRDTDIT
KTSWDSDDYDDPKTIIEDCIENQKKLLCGFFGNENANPEKLEECVKPNNAALSLAGEPLLYPEINQLIEEFHKQNFTTFL
VSNGENPDKIEALGKHEPTQLYISLDAPNKEIYKKVCKPQVSNGWEKLQESLELLSTIDTRKVLRITSVKDLNMIHTEEY
AKIIEKADVDYVEIKAYMFVGDSRNRLQWENMPKTVDIQEFAQSIAEKTSMDIIDEVEKSRVLLLGEKKPGKYNN

Specific function: Unknown

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0026 family [H]

Homologues:

Organism=Homo sapiens, GI50726981, Length=312, Percent_Identity=34.2948717948718, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI224282123, Length=262, Percent_Identity=32.4427480916031, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI224282125, Length=262, Percent_Identity=32.4427480916031, Blast_Score=148, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6325049, Length=312, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197
- InterPro:   IPR013917 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08608 Wyosine_form [H]

EC number: NA

Molecular weight: Translated: 36389; Mature: 36389

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISQTKQKDLEKKGYRFAGKNIHAANKICHWTRKSIVDEGTCYKEQFYGIKSHRCLQMS
CCCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECC
PAIAYCQHKCLFCWRDTDITKTSWDSDDYDDPKTIIEDCIENQKKLLCGFFGNENANPEK
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHH
LEECVKPNNAALSLAGEPLLYPEINQLIEEFHKQNFTTFLVSNGENPDKIEALGKHEPTQ
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEE
LYISLDAPNKEIYKKVCKPQVSNGWEKLQESLELLSTIDTRKVLRITSVKDLNMIHTEEY
EEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
AKIIEKADVDYVEIKAYMFVGDSRNRLQWENMPKTVDIQEFAQSIAEKTSMDIIDEVEKS
HHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHC
RVLLLGEKKPGKYNN
EEEEEECCCCCCCCC
>Mature Secondary Structure
MIISQTKQKDLEKKGYRFAGKNIHAANKICHWTRKSIVDEGTCYKEQFYGIKSHRCLQMS
CCCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECC
PAIAYCQHKCLFCWRDTDITKTSWDSDDYDDPKTIIEDCIENQKKLLCGFFGNENANPEK
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHH
LEECVKPNNAALSLAGEPLLYPEINQLIEEFHKQNFTTFLVSNGENPDKIEALGKHEPTQ
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEE
LYISLDAPNKEIYKKVCKPQVSNGWEKLQESLELLSTIDTRKVLRITSVKDLNMIHTEEY
EEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
AKIIEKADVDYVEIKAYMFVGDSRNRLQWENMPKTVDIQEFAQSIAEKTSMDIIDEVEKS
HHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHC
RVLLLGEKKPGKYNN
EEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]