| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490119
Identifier: 84490119
GI number: 84490119
Start: 1498661
End: 1500007
Strand: Direct
Name: 84490119
Synonym: Msp_1331
Alternate gene names: NA
Gene position: 1498661-1500007 (Clockwise)
Preceding gene: 84490118
Following gene: 84490120
Centisome position: 84.79
GC content: 26.58
Gene sequence:
>1347_bases ATGAAAAACATATTAATTAGTGATGCTAATCATGGTGGACTTACACTTCTTGAAGAATATTCAAAATACACCAAGAATAA TTTATTTTTCTATGATACATACAACAAACTTAATTTAGATATGAAAGAATTTTATAAAAAAAAATATAATGTTGAGTTTC TTTCATTAGATGATATTAGGAAAAATGAGGATAAATATATTACAATTAGTCCCATACATATGAAACCATTATTTAGGTGT GATTATACTCATCATGAATTTACAGGATATTTAATTAAAAAACATGAAGAATGTTATGGATGGAATTTTAAGATTATAGA AATTACTGGTGTTAAGGGAAAAACTACAACTGCAAACTTAATAATGGAAGTTTTAAAAAATAAAAATCTTCTTGTTTTAA CAAGCCATAATCTTCTATATAAAAGTTGTGAAAGGGAGATTGTTTTGGATAAAACACTGAGTATCACACCAGCCAGTATA ATTCATGCCCTTAATAGAGCAAAAGATATGAATTTACTCAGTAGTATTGATTACTGTATTTTTGAAGTATCTCTTGGTAT AACAACAAATACAGACATTGGTATTCTAACAAATATATTAGAGGATTATCCAATTGCAGATAATAGCCAAAGTGCATCTA GTGCAAAAAAATCAGTTTTTAAATCAAAAAAGGTTATTTGTGATAGAACTACCCTTAAGAAGTACTACCCACACATGGAC AAAAATATTATAACTGTTAGTTTAGATGATAAAACTGCAGACATCTATACAACAGAGATTGATTATAATATTAAGAGTAC TTCAATTAGAATAAAATACTGTGACTATGAATTTAGAGTGAATTGTTTTGCCCTATGTGATTTTTATATAAATAACATAC TATATGCTGTGTGTGTTGGTTTGTTGTTGGATATTCCAATAAAAACAATTACCTCAAATATAAAGGATACTCTACCAATA GAAGGTAGAGGATCAATTAAATATATTGAAGATAAAATAGTTCTTGAAGATATTAATCCAGGACTTAACACCACATCCAT ATCAAAATGTATTTCAAATCTAGAGAGATATTCAAATAATTATGTGTTGATTGTTGGTGGAGATTATGGTATAACTTGTG AGGAAATAGATGAAGAGAAGTTATCTAAATACATATCCACCATAGATTCACCTATTGTTTTAACAGGAGATGTTGGATAT AATCTATTAAAAAAATTAGATAAAGACTATGAATTCTATCATGAACTCACTGATGCTTTTAATTATTTACTTAAAAAGGA TTATGATGTTATTCAAATAATTTACAGAAGTGAGTATGCTAGAAATATTACATATCTTCCAAATTAA
Upstream 100 bases:
>100_bases ATTCAGCATATTTTGTTAGATTTAAAAAGAATTTCTATAATAGTGTAAATAATAAATTAATTGTAGGTTAACTACAATTT TCTCTTTTTTAGGTGTTGAT
Downstream 100 bases:
>100_bases ATATAAATTGAAACTAATTAAAATTATTTGTAAGAGTATAAAAAGAAGAAGTAACTTATTGAGTAATATATTTATTTAAA TCAAAGACATGGTAAAAATA
Product: UDP-N-acetylmuramyl pentapeptide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIRKNEDKYITISPIHMKPLFRC DYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANLIMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASI IHALNRAKDMNLLSSIDYCIFEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVGLLLDIPIKTITSNIKDTLPI EGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNNYVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGY NLLKKLDKDYEFYHELTDAFNYLLKKDYDVIQIIYRSEYARNITYLPN
Sequences:
>Translated_448_residues MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIRKNEDKYITISPIHMKPLFRC DYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANLIMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASI IHALNRAKDMNLLSSIDYCIFEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVGLLLDIPIKTITSNIKDTLPI EGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNNYVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGY NLLKKLDKDYEFYHELTDAFNYLLKKDYDVIQIIYRSEYARNITYLPN >Mature_448_residues MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIRKNEDKYITISPIHMKPLFRC DYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANLIMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASI IHALNRAKDMNLLSSIDYCIFEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVGLLLDIPIKTITSNIKDTLPI EGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNNYVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGY NLLKKLDKDYEFYHELTDAFNYLLKKDYDVIQIIYRSEYARNITYLPN
Specific function: Unknown
COG id: COG0770
COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: NA
Molecular weight: Translated: 51763; Mature: 51763
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIR CCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCEEEEECCCCC KNEDKYITISPIHMKPLFRCDYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANL CCCCCEEEEEEEECCCEEEECCCCCHHHHHEEEECCHHCCCCEEEEEEECCCCCCHHHHH IMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASIIHALNRAKDMNLLSSIDYCI HHHHHCCCCEEEEECCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEE FEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD EEEEECEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHCCCCC KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVG CCEEEEEECCCCCEEEEEEEECEEEEEEEEEEEECEEECEEHHHHHHHHHHHHHHHHHHH LLLDIPIKTITSNIKDTLPIEGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNN HHHHCCHHHHHCCCCCCCCCCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHCCC YVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGYNLLKKLDKDYEFYHELTDAF EEEEEECCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCHHHHHHHHHHHHH NYLLKKDYDVIQIIYRSEYARNITYLPN HHHHHCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKNILISDANHGGLTLLEEYSKYTKNNLFFYDTYNKLNLDMKEFYKKKYNVEFLSLDDIR CCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCEEEEECCCCC KNEDKYITISPIHMKPLFRCDYTHHEFTGYLIKKHEECYGWNFKIIEITGVKGKTTTANL CCCCCEEEEEEEECCCEEEECCCCCHHHHHEEEECCHHCCCCEEEEEEECCCCCCHHHHH IMEVLKNKNLLVLTSHNLLYKSCEREIVLDKTLSITPASIIHALNRAKDMNLLSSIDYCI HHHHHCCCCEEEEECCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEE FEVSLGITTNTDIGILTNILEDYPIADNSQSASSAKKSVFKSKKVICDRTTLKKYYPHMD EEEEECEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHCCCCC KNIITVSLDDKTADIYTTEIDYNIKSTSIRIKYCDYEFRVNCFALCDFYINNILYAVCVG CCEEEEEECCCCCEEEEEEEECEEEEEEEEEEEECEEECEEHHHHHHHHHHHHHHHHHHH LLLDIPIKTITSNIKDTLPIEGRGSIKYIEDKIVLEDINPGLNTTSISKCISNLERYSNN HHHHCCHHHHHCCCCCCCCCCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHCCC YVLIVGGDYGITCEEIDEEKLSKYISTIDSPIVLTGDVGYNLLKKLDKDYEFYHELTDAF EEEEEECCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCHHHHHHHHHHHHH NYLLKKDYDVIQIIYRSEYARNITYLPN HHHHHCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]