| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490075
Identifier: 84490075
GI number: 84490075
Start: 1452375
End: 1453115
Strand: Direct
Name: 84490075
Synonym: Msp_1287
Alternate gene names: NA
Gene position: 1452375-1453115 (Clockwise)
Preceding gene: 84490074
Following gene: 84490076
Centisome position: 82.18
GC content: 23.21
Gene sequence:
>741_bases ATGAGTATACAAATAAAAGCACTACCTCAACCCTTGAGTAAAATAATTGATTCAGCTAGTAATATATATGAATTGGGTGA TGAATACTATACTGATGATGTTAATTTTAAAATCAGGACAAACATACCAAGTGTTGTAGATTTAGAAGATATACTTAAAA ATCCCAATAATCTATTTGGATTTAAAACAAAAGAAAGTCTACTTAAGTTCAGTAGACAAGGTGAGATGTTATTTTATATT GTAGATTCACATGTTGAAATTCTGTTTATGGGAAATTTCCCTAAAAATCAAGCCATTAATTTTGTAACAAGTATTTGTGA AGAATATGATCAAAATTCAGGGAATTCTATTTTTAATGTTAATTTAAAAGAAATTACAGATGAAAATCATCCAAAATTTA GGATACGGACAGATATGAAAAACATTGACATAATAGAATCAATAATGAAAGAAAATTTTTTAGGTTTTCATTCACAAGAG GAATTAAATGAATTTAAAGAAAGGGGAAAAATATCTCTAAATAAATTAGAAGATAATACATATGAATTAGTATTTTTTGG AAATTATCAAAAAGATGAAGTTAGTAATTATGTTAAAAATCTTAATGATGCTTATAAATCCAAAATTCAAGAAATGACAT ATGTTAAATTAATAGAAAAGATTAAAAAGAACAATTATAAGTTAGAAAAAGAAATTATAGACAATGAAAATTCAATAATA TTAACATTAAATATAGATTAA
Upstream 100 bases:
>100_bases AGAAAAAACATTCCATTAAATATTTTTTTTATAGATTCTTTTTTATAGATAAAACCTTATTTAATTTCAAGTATAAGTAA CTAAATTCAAAAGTGATATT
Downstream 100 bases:
>100_bases TAAAAATCAACACCATAAACTCCTTCTTTTAGACGAAAAAACATACTATATGAATTTAATTTAAAAAAAATTATTTTTAT TAAGAAATATTTATTTATGT
Product: multicopy protein B 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSIQIKALPQPLSKIIDSASNIYELGDEYYTDDVNFKIRTNIPSVVDLEDILKNPNNLFGFKTKESLLKFSRQGEMLFYI VDSHVEILFMGNFPKNQAINFVTSICEEYDQNSGNSIFNVNLKEITDENHPKFRIRTDMKNIDIIESIMKENFLGFHSQE ELNEFKERGKISLNKLEDNTYELVFFGNYQKDEVSNYVKNLNDAYKSKIQEMTYVKLIEKIKKNNYKLEKEIIDNENSII LTLNID
Sequences:
>Translated_246_residues MSIQIKALPQPLSKIIDSASNIYELGDEYYTDDVNFKIRTNIPSVVDLEDILKNPNNLFGFKTKESLLKFSRQGEMLFYI VDSHVEILFMGNFPKNQAINFVTSICEEYDQNSGNSIFNVNLKEITDENHPKFRIRTDMKNIDIIESIMKENFLGFHSQE ELNEFKERGKISLNKLEDNTYELVFFGNYQKDEVSNYVKNLNDAYKSKIQEMTYVKLIEKIKKNNYKLEKEIIDNENSII LTLNID >Mature_245_residues SIQIKALPQPLSKIIDSASNIYELGDEYYTDDVNFKIRTNIPSVVDLEDILKNPNNLFGFKTKESLLKFSRQGEMLFYIV DSHVEILFMGNFPKNQAINFVTSICEEYDQNSGNSIFNVNLKEITDENHPKFRIRTDMKNIDIIESIMKENFLGFHSQEE LNEFKERGKISLNKLEDNTYELVFFGNYQKDEVSNYVKNLNDAYKSKIQEMTYVKLIEKIKKNNYKLEKEIIDNENSIIL TLNID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28817; Mature: 28686
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQIKALPQPLSKIIDSASNIYELGDEYYTDDVNFKIRTNIPSVVDLEDILKNPNNLFG CCEEEECCCHHHHHHHHCHHHHHHHCHHHCCCCCCEEEECCCCCEECHHHHHCCCCCCCC FKTKESLLKFSRQGEMLFYIVDSHVEILFMGNFPKNQAINFVTSICEEYDQNSGNSIFNV CCCHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEE NLKEITDENHPKFRIRTDMKNIDIIESIMKENFLGFHSQEELNEFKERGKISLNKLEDNT EHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCE YELVFFGNYQKDEVSNYVKNLNDAYKSKIQEMTYVKLIEKIKKNNYKLEKEIIDNENSII EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCEE LTLNID EEEECC >Mature Secondary Structure SIQIKALPQPLSKIIDSASNIYELGDEYYTDDVNFKIRTNIPSVVDLEDILKNPNNLFG CEEEECCCHHHHHHHHCHHHHHHHCHHHCCCCCCEEEECCCCCEECHHHHHCCCCCCCC FKTKESLLKFSRQGEMLFYIVDSHVEILFMGNFPKNQAINFVTSICEEYDQNSGNSIFNV CCCHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEE NLKEITDENHPKFRIRTDMKNIDIIESIMKENFLGFHSQEELNEFKERGKISLNKLEDNT EHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCE YELVFFGNYQKDEVSNYVKNLNDAYKSKIQEMTYVKLIEKIKKNNYKLEKEIIDNENSII EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCEE LTLNID EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA