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The map label for this gene is 84489999

Identifier: 84489999

GI number: 84489999

Start: 1378295

End: 1378789

Strand: Direct

Name: 84489999

Synonym: Msp_1207

Alternate gene names: NA

Gene position: 1378295-1378789 (Clockwise)

Preceding gene: 84489997

Following gene: 84490011

Centisome position: 77.98

GC content: 28.69

Gene sequence:

>495_bases
ATGAATTGTGAAATATGTGGAACAGAAATAAAAGGTCAACCTTATAAAACTAAAATAGATAATTCTCTTATGGTTACATG
TAAAGAATGCTCTAGATATGGAAAAGTTCAACAAAAACCACAACGCCAAGGAAATAATAAAAGAAATAAAAATAATCAGA
ACAGAAGAACAAATTCAAACAGACCATACACCCGAAAATCTAAAGAAGAAGAGTATGAACTAGTCGATGATTATGAAAAA
ACTATTAAACAAGCAAGAGAAAAGAAAAATCTCACACATAAACAACTTGGAGAAAAAATCTATGAAAGAGAATCTGTTAT
AGCTAACATTGAAACTGGAAAAATGGTTCCTGATAATAAGATTGCTCATAAATTAGAAAAAGCATTACATATAAAAATTA
TTGAAAAAATAGAAAGTAATGAAAGGGAATTCCAAGAGTCTAGACGTTTTAAAGAAGCTACCCTTGGAGATATAGCTCGT
ATAAAAAGGAAGTAA

Upstream 100 bases:

>100_bases
AAAAAAAGTAAGAAAAAGAAATGTGAAAAAATACAAAAAGAATATTTAAGTAAATAAAAATAGATATGTGTATATAAAAA
TAATATTTAAGTGAATAACA

Downstream 100 bases:

>100_bases
ATAATTAATTACATTCCTTCAATTACTTTTTTTTGAATTTGAAGATTTATTTTTAGAAGAATAATAACCATCAAATATTT
TAGATTTACTAAATTCCTTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNCEICGTEIKGQPYKTKIDNSLMVTCKECSRYGKVQQKPQRQGNNKRNKNNQNRRTNSNRPYTRKSKEEEYELVDDYEK
TIKQAREKKNLTHKQLGEKIYERESVIANIETGKMVPDNKIAHKLEKALHIKIIEKIESNEREFQESRRFKEATLGDIAR
IKRK

Sequences:

>Translated_164_residues
MNCEICGTEIKGQPYKTKIDNSLMVTCKECSRYGKVQQKPQRQGNNKRNKNNQNRRTNSNRPYTRKSKEEEYELVDDYEK
TIKQAREKKNLTHKQLGEKIYERESVIANIETGKMVPDNKIAHKLEKALHIKIIEKIESNEREFQESRRFKEATLGDIAR
IKRK
>Mature_164_residues
MNCEICGTEIKGQPYKTKIDNSLMVTCKECSRYGKVQQKPQRQGNNKRNKNNQNRRTNSNRPYTRKSKEEEYELVDDYEK
TIKQAREKKNLTHKQLGEKIYERESVIANIETGKMVPDNKIAHKLEKALHIKIIEKIESNEREFQESRRFKEATLGDIAR
IKRK

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004451
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 19414; Mature: 19414

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCEICGTEIKGQPYKTKIDNSLMVTCKECSRYGKVQQKPQRQGNNKRNKNNQNRRTNSN
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCHHHCCCCCCCCCCCCCCCCCC
RPYTRKSKEEEYELVDDYEKTIKQAREKKNLTHKQLGEKIYERESVIANIETGKMVPDNK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
IAHKLEKALHIKIIEKIESNEREFQESRRFKEATLGDIARIKRK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNCEICGTEIKGQPYKTKIDNSLMVTCKECSRYGKVQQKPQRQGNNKRNKNNQNRRTNSN
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCHHHCCCCCCCCCCCCCCCCCC
RPYTRKSKEEEYELVDDYEKTIKQAREKKNLTHKQLGEKIYERESVIANIETGKMVPDNK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
IAHKLEKALHIKIIEKIESNEREFQESRRFKEATLGDIARIKRK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]