Click here to switch to the map view.

The map label for this gene is 84489900

Identifier: 84489900

GI number: 84489900

Start: 1259140

End: 1259784

Strand: Direct

Name: 84489900

Synonym: Msp_1106

Alternate gene names: NA

Gene position: 1259140-1259784 (Clockwise)

Preceding gene: 84489899

Following gene: 84489901

Centisome position: 71.24

GC content: 30.54

Gene sequence:

>645_bases
ATGTCAACAGCCATTCCTGGTGGAGAAATGTTATCAGGAGCATTAAATGTTATTGCACAAAGTTTATTACTTCCAGTAAT
GATTTTACTTGTAATATTTGTTATATTTGCTATTATAGAATTAGGAGCAATTATTGCAGAATATACTGGGCGTAAGAAAA
TCACTGCAAAGGATAAAAGTATAATAATAAAAAATATTGCTTCTTGTAAAACACAAGATGAAATCTGTCAAGTACTCAAT
GACAGTAAATTAAAAAAATATGATAAAGAAATATTAACATCAATAGCAAAACTTGATAAAGAATTATATGATAAACAAAC
ACGTGAAGTTTTAGCTAGAAATCTTCTTGAAGATCAAGAATTTAAAGTTGAAAAATCTCTAGAAAAAGCTGATATTGTAG
CAAAAGTAGGATCTGGTTGTGGATTATTAGGTACAATTATTCCAATGGGCCCAGGACTAGCTGCACTAGGAAATGGAGAT
ATGGTTACCTTAACTTCAAATCTAACAGTTGCTTTTAACACAACAACAGCTGGACTAGCTGCAGGTAGTTTATGTTTTGT
AATATCAAAAATACGCAGTAGATGGTATGAAGAAGATTTAGCCATGCTATATGATTTATCAGAAACTATTCTTGAGGTGA
TGTAA

Upstream 100 bases:

>100_bases
GTCAGTGTTTTATGTTTACTTATTGCAGGTGGAATATTTGCTAGAAACAAAAGTTATTTCTTAGAAAAATAAAACAAGAG
ACAAAGTAGGAGGAAAAGAA

Downstream 100 bases:

>100_bases
TGACACTAAAAAGAAGAAGACTATCTAAAAGGAATCATGATATTGATCCTATGTCTTCTGCAGTTAATATGACTGATGTA
ATGTTAGTTTTAGCTGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; MotA/lQ/ExbB Proton Channel Family Domain Protein; Integral Membrane Protein; Biopolymer Transport Protein-Like Protein; Transport-Related Membrane Protein; Transporter MotA/lQ/ExbB Proton Channel Family

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTAIPGGEMLSGALNVIAQSLLLPVMILLVIFVIFAIIELGAIIAEYTGRKKITAKDKSIIIKNIASCKTQDEICQVLN
DSKLKKYDKEILTSIAKLDKELYDKQTREVLARNLLEDQEFKVEKSLEKADIVAKVGSGCGLLGTIIPMGPGLAALGNGD
MVTLTSNLTVAFNTTTAGLAAGSLCFVISKIRSRWYEEDLAMLYDLSETILEVM

Sequences:

>Translated_214_residues
MSTAIPGGEMLSGALNVIAQSLLLPVMILLVIFVIFAIIELGAIIAEYTGRKKITAKDKSIIIKNIASCKTQDEICQVLN
DSKLKKYDKEILTSIAKLDKELYDKQTREVLARNLLEDQEFKVEKSLEKADIVAKVGSGCGLLGTIIPMGPGLAALGNGD
MVTLTSNLTVAFNTTTAGLAAGSLCFVISKIRSRWYEEDLAMLYDLSETILEVM
>Mature_213_residues
STAIPGGEMLSGALNVIAQSLLLPVMILLVIFVIFAIIELGAIIAEYTGRKKITAKDKSIIIKNIASCKTQDEICQVLND
SKLKKYDKEILTSIAKLDKELYDKQTREVLARNLLEDQEFKVEKSLEKADIVAKVGSGCGLLGTIIPMGPGLAALGNGDM
VTLTSNLTVAFNTTTAGLAAGSLCFVISKIRSRWYEEDLAMLYDLSETILEVM

Specific function: Unknown

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23220; Mature: 23088

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAIPGGEMLSGALNVIAQSLLLPVMILLVIFVIFAIIELGAIIAEYTGRKKITAKDKS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
IIIKNIASCKTQDEICQVLNDSKLKKYDKEILTSIAKLDKELYDKQTREVLARNLLEDQE
HHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKVEKSLEKADIVAKVGSGCGLLGTIIPMGPGLAALGNGDMVTLTSNLTVAFNTTTAGLA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCEEEEECCEEEEEECCHHHHH
AGSLCFVISKIRSRWYEEDLAMLYDLSETILEVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
STAIPGGEMLSGALNVIAQSLLLPVMILLVIFVIFAIIELGAIIAEYTGRKKITAKDKS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
IIIKNIASCKTQDEICQVLNDSKLKKYDKEILTSIAKLDKELYDKQTREVLARNLLEDQE
HHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKVEKSLEKADIVAKVGSGCGLLGTIIPMGPGLAALGNGDMVTLTSNLTVAFNTTTAGLA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCEEEEECCEEEEEECCHHHHH
AGSLCFVISKIRSRWYEEDLAMLYDLSETILEVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA