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The map label for this gene is 84489883

Identifier: 84489883

GI number: 84489883

Start: 1231561

End: 1231944

Strand: Direct

Name: 84489883

Synonym: Msp_1089

Alternate gene names: NA

Gene position: 1231561-1231944 (Clockwise)

Preceding gene: 84489879

Following gene: 84489885

Centisome position: 69.68

GC content: 31.51

Gene sequence:

>384_bases
ATGGTATATGCTTCTAATAACATGAAAGACATGCCACGACCAGAATTAGATGGTAGTAATGTTACTGGAGAATGTTATAA
AGTTATTGATGGAGATACAATCTATGTTTCAGGTCTAGGTAAAGTTAGATTTGTTGGAGTTAATACTCCTGAACGTGGAG
AAGAAGGATACTACGAAGCAAAAAACTATGTAAAAGAAAGATGTTTAGGAAAAATGGTTACTATTGATGTGGATGATGCA
AAACACTTTGATAAATACAATAGAACATTAGGTGTTGTGTATGTTGATGATAGTAACTTAAATCAAGAATTATTAGAAAA
AAATCTTGCAGAAATAATGTACATACCACCATCTGAATTTAATCCATACAGTTGGGCTGTATAA

Upstream 100 bases:

>100_bases
GAGAAACACAACCATAATAGTTGGGTAGGTCAAGAAAGTGATAAAGATGAAAAAAATAATACCTATATTGATAATTGTAG
GATTATTCTTATGTAGTTCC

Downstream 100 bases:

>100_bases
CCTTATTTCTTTACTTATTATTTTTTTATAAAAGAGTTTATATAGTATAATATTCACCATCAGCTCGTTTTACTTTTTTA
AGTAAGTTTTTATTTTCTAG

Product: nuclease

Products: NA

Alternate protein names: Staphylococcal Nuclease Domain-Containing Protein; Micrococcal Nuclease-Like Protein; Excalibur Domain-Containing Protein; Thermonuclease

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MVYASNNMKDMPRPELDGSNVTGECYKVIDGDTIYVSGLGKVRFVGVNTPERGEEGYYEAKNYVKERCLGKMVTIDVDDA
KHFDKYNRTLGVVYVDDSNLNQELLEKNLAEIMYIPPSEFNPYSWAV

Sequences:

>Translated_127_residues
MVYASNNMKDMPRPELDGSNVTGECYKVIDGDTIYVSGLGKVRFVGVNTPERGEEGYYEAKNYVKERCLGKMVTIDVDDA
KHFDKYNRTLGVVYVDDSNLNQELLEKNLAEIMYIPPSEFNPYSWAV
>Mature_127_residues
MVYASNNMKDMPRPELDGSNVTGECYKVIDGDTIYVSGLGKVRFVGVNTPERGEEGYYEAKNYVKERCLGKMVTIDVDDA
KHFDKYNRTLGVVYVDDSNLNQELLEKNLAEIMYIPPSEFNPYSWAV

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14447; Mature: 14447

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYASNNMKDMPRPELDGSNVTGECYKVIDGDTIYVSGLGKVRFVGVNTPERGEEGYYEA
CEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCHHHH
KNYVKERCLGKMVTIDVDDAKHFDKYNRTLGVVYVDDSNLNQELLEKNLAEIMYIPPSEF
HHHHHHHHCCEEEEEECCCCHHHHCCCCEEEEEEEECCCCCHHHHHCCHHHEEECCCCCC
NPYSWAV
CCCCCCC
>Mature Secondary Structure
MVYASNNMKDMPRPELDGSNVTGECYKVIDGDTIYVSGLGKVRFVGVNTPERGEEGYYEA
CEECCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCHHHH
KNYVKERCLGKMVTIDVDDAKHFDKYNRTLGVVYVDDSNLNQELLEKNLAEIMYIPPSEF
HHHHHHHHCCEEEEEECCCCHHHHCCCCEEEEEEEECCCCCHHHHHCCHHHEEECCCCCC
NPYSWAV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA