| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489885
Identifier: 84489885
GI number: 84489885
Start: 1233117
End: 1235324
Strand: Direct
Name: 84489885
Synonym: Msp_1091
Alternate gene names: NA
Gene position: 1233117-1235324 (Clockwise)
Preceding gene: 84489883
Following gene: 84489886
Centisome position: 69.77
GC content: 28.35
Gene sequence:
>2208_bases ATGTTTAAAAAGTATAGTAAAGAAGTATTTTTACTTATACTAGTATCATTACTTCTTATTAGTATTTCAGCAATAAGTGC AGGTGATGTGTCAAACTCGACAACCACATCACCAACAGTTACTGTTGAAAAACAAGTAAGTATGAGTAATGTTATAAAAG AAGATACTACTGATAATAAGGTATTATCTAAAAATAGTGAAAATATTCAAACAAAAGAAAAAACAGATAATAAAAAAACA ATAAAAAAAGAAACCAGTAATGTAGACTATTATGTCTGTGATAATAGTGGAAGTGATAGTAATACTGGAAGTCAAGATAA TCCCTTTAAAACCATAGGATATGCAGTTGGAAAGGTAAATTCCAATGATAATTACAACATCCACATTAAAAATGGTACAT ATAAAGGTACAGGAAATACAAATCTAACAATAGATAATAACACCCCAAGTACTCCTTTAACACCAACAAAATTAAAAACA AAAAGTATTAAAACAGAAACAATCACCAATGACAACTACAATCAATACTTCGATGAAAATGGAGTAATAAAACCATCAAT AACAGAAATTACATTAGGATCTGACTTATACAATAAAAATATGACTATAAGTCATCAAGTAAACAGTTTTGCAAATCCTA ATAATTACACATTATATAATTCAACAATTATTCTCAATAATAATGAAGGAAGTGAATCAAATTATATGGGTTTGGATGAT ATTAAGATTATCAATACTGATGAGCGAGAATCAGCAATTACAATAACAGGTTCTGGTGTTAATGTAGCACTTACAGGTTT ATATATTTATCAAAAAAATAATGGTAAAAGCTGTGCTATTAATTGTAGCTCTGAAAGGGGACTAGACATACTCAATAGTA CTATTGATATGGATTGTAATGAAGCTATAGCTATAAATGTGAATAATAAGGTGTCTGCTTCTATTATGTCAAATACTATA ACTATTAAAACTAAAATAGCTACTCCCGTAATTATAGGAAATAATTCATACGTTGGTATTGGTGCATGTTTCATTGAGGT AAATGAATCTTCTAATAAACCAATCATATCTTTAGAAAATTATAATCCTGAAGATGAAGAGGCAGTAACAATGGTTATTT ACAATTATTTAGAAACTCCTTTTGCAAAGGGAGATGATACAGTAAACATAGTAAATTCTACTAGCACCTTTGTTACAGGT AATATACCTTCTGAAGAAAACAGTATGATTCCTGTTAACATAGCATTTTCTAATAAATTGTATAAAGGTGTTGATAATTA TATTAATATAACTGTTGTTGATTTATTTGGTAATAAAATTAATGAAGGAATTGTATCTGTAAAAATTAATGATACTGAAA TAGGCACTGCAACTGTAAAAGATGGTCTTGCATCAATAAAATACAAACCAACTGAATCAGGAAATTACACTATAAACGTA AATTATACTTGTGATAGTGGAAAATACGCCCACTTAAAATGGATTATAGATTACGAAGCTGAAGATCCTTCAGAGATGTT TTCCTTAGAACAAGTAAATACAACTGGTATCCTCGAGTATGCTGATGCTGTTGCTAGTATTACCATGAATCCTATAGTTT CATGTCTTAATAATGTAATTAATGTGTCCTCTTCCATTACATTTAATGGTAATAATGTTAATGATGGACGTGTTGTATTT AAAGTTAATGGTAAAACATTAAAAGATGCAGATGGAAACATACAATATGTTAAAGTAGTTGATGGTAAAGCTGTAATTGA AAATGTTATAGTGAATTCTAACTGGTTAAGACAAAACCCTACTATAACCACAGTTTATAGTGGTAATGGTATTATACTTG GTTCTACCTATACTGATGTTATGAATATTACTAAGGCAAAAGCACATATTGAATTAGAACCACAGACAGCAGAAGAAAAA TCACAAATAACAATAACAGCAAAAATTACAAATGAAATAATCAATGAAAATTCTCAAACAAACAACAAGGTAACTGGTGG ACGAGTAATTTTTAAAATTAATGGTAGAACTTTAAAAGATAGTAATAATAATGTAATTTATGCAACAGTAGAAAATGGTG TGGCTTCAATAACATATACCCTACCTTCAACATTAAAATCCAAGGAATATACTTTATCATGTGTATATGGACATAAATTA TATGAAAGAAGTGAAGGAAACACAACACTTACTATTGTAAAATCATGA
Upstream 100 bases:
>100_bases ATTTTCAAGTATATTTTATTAATAATATTATTTTGGGATAGTTGTACTATCAATTAAAGAATTACTTATAATAATACAAA GCCAGTAAGAGGTTAGTATA
Downstream 100 bases:
>100_bases GGAGTTTTTTACTCTTCATTCATTTTTTTTGTTTCTTTAAAAAATAAAATAGAATAAGATTTGAGAATAAAGGTAAGAAT AATCCAATTAAAGTCCTCTT
Product: asn/thr-rich large protein family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MFKKYSKEVFLLILVSLLLISISAISAGDVSNSTTTSPTVTVEKQVSMSNVIKEDTTDNKVLSKNSENIQTKEKTDNKKT IKKETSNVDYYVCDNSGSDSNTGSQDNPFKTIGYAVGKVNSNDNYNIHIKNGTYKGTGNTNLTIDNNTPSTPLTPTKLKT KSIKTETITNDNYNQYFDENGVIKPSITEITLGSDLYNKNMTISHQVNSFANPNNYTLYNSTIILNNNEGSESNYMGLDD IKIINTDERESAITITGSGVNVALTGLYIYQKNNGKSCAINCSSERGLDILNSTIDMDCNEAIAINVNNKVSASIMSNTI TIKTKIATPVIIGNNSYVGIGACFIEVNESSNKPIISLENYNPEDEEAVTMVIYNYLETPFAKGDDTVNIVNSTSTFVTG NIPSEENSMIPVNIAFSNKLYKGVDNYINITVVDLFGNKINEGIVSVKINDTEIGTATVKDGLASIKYKPTESGNYTINV NYTCDSGKYAHLKWIIDYEAEDPSEMFSLEQVNTTGILEYADAVASITMNPIVSCLNNVINVSSSITFNGNNVNDGRVVF KVNGKTLKDADGNIQYVKVVDGKAVIENVIVNSNWLRQNPTITTVYSGNGIILGSTYTDVMNITKAKAHIELEPQTAEEK SQITITAKITNEIINENSQTNNKVTGGRVIFKINGRTLKDSNNNVIYATVENGVASITYTLPSTLKSKEYTLSCVYGHKL YERSEGNTTLTIVKS
Sequences:
>Translated_735_residues MFKKYSKEVFLLILVSLLLISISAISAGDVSNSTTTSPTVTVEKQVSMSNVIKEDTTDNKVLSKNSENIQTKEKTDNKKT IKKETSNVDYYVCDNSGSDSNTGSQDNPFKTIGYAVGKVNSNDNYNIHIKNGTYKGTGNTNLTIDNNTPSTPLTPTKLKT KSIKTETITNDNYNQYFDENGVIKPSITEITLGSDLYNKNMTISHQVNSFANPNNYTLYNSTIILNNNEGSESNYMGLDD IKIINTDERESAITITGSGVNVALTGLYIYQKNNGKSCAINCSSERGLDILNSTIDMDCNEAIAINVNNKVSASIMSNTI TIKTKIATPVIIGNNSYVGIGACFIEVNESSNKPIISLENYNPEDEEAVTMVIYNYLETPFAKGDDTVNIVNSTSTFVTG NIPSEENSMIPVNIAFSNKLYKGVDNYINITVVDLFGNKINEGIVSVKINDTEIGTATVKDGLASIKYKPTESGNYTINV NYTCDSGKYAHLKWIIDYEAEDPSEMFSLEQVNTTGILEYADAVASITMNPIVSCLNNVINVSSSITFNGNNVNDGRVVF KVNGKTLKDADGNIQYVKVVDGKAVIENVIVNSNWLRQNPTITTVYSGNGIILGSTYTDVMNITKAKAHIELEPQTAEEK SQITITAKITNEIINENSQTNNKVTGGRVIFKINGRTLKDSNNNVIYATVENGVASITYTLPSTLKSKEYTLSCVYGHKL YERSEGNTTLTIVKS >Mature_735_residues MFKKYSKEVFLLILVSLLLISISAISAGDVSNSTTTSPTVTVEKQVSMSNVIKEDTTDNKVLSKNSENIQTKEKTDNKKT IKKETSNVDYYVCDNSGSDSNTGSQDNPFKTIGYAVGKVNSNDNYNIHIKNGTYKGTGNTNLTIDNNTPSTPLTPTKLKT KSIKTETITNDNYNQYFDENGVIKPSITEITLGSDLYNKNMTISHQVNSFANPNNYTLYNSTIILNNNEGSESNYMGLDD IKIINTDERESAITITGSGVNVALTGLYIYQKNNGKSCAINCSSERGLDILNSTIDMDCNEAIAINVNNKVSASIMSNTI TIKTKIATPVIIGNNSYVGIGACFIEVNESSNKPIISLENYNPEDEEAVTMVIYNYLETPFAKGDDTVNIVNSTSTFVTG NIPSEENSMIPVNIAFSNKLYKGVDNYINITVVDLFGNKINEGIVSVKINDTEIGTATVKDGLASIKYKPTESGNYTINV NYTCDSGKYAHLKWIIDYEAEDPSEMFSLEQVNTTGILEYADAVASITMNPIVSCLNNVINVSSSITFNGNNVNDGRVVF KVNGKTLKDADGNIQYVKVVDGKAVIENVIVNSNWLRQNPTITTVYSGNGIILGSTYTDVMNITKAKAHIELEPQTAEEK SQITITAKITNEIINENSQTNNKVTGGRVIFKINGRTLKDSNNNVIYATVENGVASITYTLPSTLKSKEYTLSCVYGHKL YERSEGNTTLTIVKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80355; Mature: 80355
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKYSKEVFLLILVSLLLISISAISAGDVSNSTTTSPTVTVEKQVSMSNVIKEDTTDNK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCE VLSKNSENIQTKEKTDNKKTIKKETSNVDYYVCDNSGSDSNTGSQDNPFKTIGYAVGKVN EECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEC SNDNYNIHIKNGTYKGTGNTNLTIDNNTPSTPLTPTKLKTKSIKTETITNDNYNQYFDEN CCCCEEEEEECCEEECCCCCEEEECCCCCCCCCCCCEEEECCEEEEEECCCCCHHHCCCC GVIKPSITEITLGSDLYNKNMTISHQVNSFANPNNYTLYNSTIILNNNEGSESNYMGLDD CEECCCEEEEEECCCCCCCCCEEEECHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC IKIINTDERESAITITGSGVNVALTGLYIYQKNNGKSCAINCSSERGLDILNSTIDMDCN EEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCHHCCEECCCCC EAIAINVNNKVSASIMSNTITIKTKIATPVIIGNNSYVGIGACFIEVNESSNKPIISLEN CEEEEEECCCEEEEEEEEEEEEEEEECCEEEECCCCEEEEEEEEEEEECCCCCCEEEECC YNPEDEEAVTMVIYNYLETPFAKGDDTVNIVNSTSTFVTGNIPSEENSMIPVNIAFSNKL CCCCCHHHEEEEEEHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCCEEEEEEEECCCH YKGVDNYINITVVDLFGNKINEGIVSVKINDTEIGTATVKDGLASIKYKPTESGNYTINV HHCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCEEHHHCCHHHEEECCCCCCCEEEEE NYTCDSGKYAHLKWIIDYEAEDPSEMFSLEQVNTTGILEYADAVASITMNPIVSCLNNVI EEEECCCCEEEEEEEEEECCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH NVSSSITFNGNNVNDGRVVFKVNGKTLKDADGNIQYVKVVDGKAVIENVIVNSNWLRQNP CCCCEEEECCCCCCCCEEEEEECCCEEECCCCCEEEEEEECCHHHHHHHEECCCEEECCC TITTVYSGNGIILGSTYTDVMNITKAKAHIELEPQTAEEKSQITITAKITNEIINENSQT CEEEEECCCEEEEECCHHHHHHEEEEEEEEEECCCCCCCCCEEEEEEEEEHHHHCCCCCC NNKVTGGRVIFKINGRTLKDSNNNVIYATVENGVASITYTLPSTLKSKEYTLSCVYGHKL CCEEECCEEEEEECCEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCEE YERSEGNTTLTIVKS EECCCCCEEEEEEEC >Mature Secondary Structure MFKKYSKEVFLLILVSLLLISISAISAGDVSNSTTTSPTVTVEKQVSMSNVIKEDTTDNK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCE VLSKNSENIQTKEKTDNKKTIKKETSNVDYYVCDNSGSDSNTGSQDNPFKTIGYAVGKVN EECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEC SNDNYNIHIKNGTYKGTGNTNLTIDNNTPSTPLTPTKLKTKSIKTETITNDNYNQYFDEN CCCCEEEEEECCEEECCCCCEEEECCCCCCCCCCCCEEEECCEEEEEECCCCCHHHCCCC GVIKPSITEITLGSDLYNKNMTISHQVNSFANPNNYTLYNSTIILNNNEGSESNYMGLDD CEECCCEEEEEECCCCCCCCCEEEECHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC IKIINTDERESAITITGSGVNVALTGLYIYQKNNGKSCAINCSSERGLDILNSTIDMDCN EEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCHHCCEECCCCC EAIAINVNNKVSASIMSNTITIKTKIATPVIIGNNSYVGIGACFIEVNESSNKPIISLEN CEEEEEECCCEEEEEEEEEEEEEEEECCEEEECCCCEEEEEEEEEEEECCCCCCEEEECC YNPEDEEAVTMVIYNYLETPFAKGDDTVNIVNSTSTFVTGNIPSEENSMIPVNIAFSNKL CCCCCHHHEEEEEEHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCCEEEEEEEECCCH YKGVDNYINITVVDLFGNKINEGIVSVKINDTEIGTATVKDGLASIKYKPTESGNYTINV HHCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCEEHHHCCHHHEEECCCCCCCEEEEE NYTCDSGKYAHLKWIIDYEAEDPSEMFSLEQVNTTGILEYADAVASITMNPIVSCLNNVI EEEECCCCEEEEEEEEEECCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH NVSSSITFNGNNVNDGRVVFKVNGKTLKDADGNIQYVKVVDGKAVIENVIVNSNWLRQNP CCCCEEEECCCCCCCCEEEEEECCCEEECCCCCEEEEEEECCHHHHHHHEECCCEEECCC TITTVYSGNGIILGSTYTDVMNITKAKAHIELEPQTAEEKSQITITAKITNEIINENSQT CEEEEECCCEEEEECCHHHHHHEEEEEEEEEECCCCCCCCCEEEEEEEEEHHHHCCCCCC NNKVTGGRVIFKINGRTLKDSNNNVIYATVENGVASITYTLPSTLKSKEYTLSCVYGHKL CCEEECCEEEEEECCEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCEE YERSEGNTTLTIVKS EECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA