| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is cdcH
Identifier: 84489878
GI number: 84489878
Start: 1224585
End: 1226777
Strand: Direct
Name: cdcH
Synonym: Msp_1084
Alternate gene names: 84489878
Gene position: 1224585-1226777 (Clockwise)
Preceding gene: 84489877
Following gene: 84489879
Centisome position: 69.29
GC content: 33.97
Gene sequence:
>2193_bases ATGACTGATGAATTAAAATTAAAAGTTGCTGAAGCATTCTCTCAAGGAGATATTGGAAGATCAATAGCAAGAATAGATCC AAAATGTATGGATGAATTAAATCTAAAAGATGGAGACATCATTGAAATTGAAGGAAATAAAATCACTACTGCAACAGTAG TAGAATCAAAATCAGATGTAAGTCTAGGAATTCTAAGAATAGATAGTTATCTTAGAAAAAATGCAGGAACATCCATAGGA GAAGAAGTAACAATCAGACCTGCAACTATAAAAGAAGCTAAAAAAGTTAAATTAGCGCCAGTAGATCAAGAAATTGCAAT ACAAGGAAATTTAAACTCAGTATTCCTAAATAGAACAGTAAACAAAGGAGACATTATCATAACTGGTGTTAGAAAACAAC AACCAAAAACATCAAGTATGATGTTTGACGACCTTATAAATCAAATGATGTCCAATATGGCATCAATTGGTGAAATCAAA CTTGCAGTAGTAAATACAAAACCACTGGGTCCTGTAAAAATCACAGAAAATACCCAAATTGAAATGGAAACAAAACCAGT AGACCCTAGTAAGTTCGAAGGAGTTGAAAACCTAATAGATGTATCCTATGAAGATATTGGTGGATTAAAAAATGAAGTTA AAAAAATAAGAGAAATGGTAGAAATTCCACTAAAAAGACCAGAGTTATTCAAACAATTAGGAATTTCAGCACCAAAAGGA GTATTACTCCATGGACCGCCTGGAACTGGTAAAACATTACTAGCAAAAGCTGTGGCAAATGAAACAAATGCCCACTTCAT AGTAATTAATGGACCAGAAATCATGAGTAAATACGTTGGAGGATCAGAAGAACAATTAAGAGAACTCTTTGAAGAAGCAG AAGAAAACAGTCCTTCCATCATATTCATAGATGAACTAGATGCAATTGCACCAAAAAGAGAAGAAGTATCAGGAGATGTA GAACGTAGAACAGTAGCCCAATTACTAACACTTATGGATGGACTTAAAAGTAGAGGAGAAGTAGTAGTAATTGGAGCAAC CAACAGACCTGATGCAATTGATGCAGCATTAAGAAGACCTGGAAGATTTGACAGAGAAATAGAAATTGGAGTTCCAGATA AAGAAGAAAGAAAAGAAATTCTTGAAGTACATACAAGACATATGCCACTTGATGATGATGTAAATCTTGATGAATTAACA GAAGTAACACATGGATTTGTAGGAGCCGACCTTGAAGCACTATGTAAAGAAGCAGCAATGAGAGTTCTAAGAAGAATACT TCCAGAAATACAGACAGACAAAGAAGTACCACAAGAAGTACTTGAAAAAATGGTACTACATAAAAAAGATTTCAAAAATG CACTAAAAGAAATACAACCATCAGCACTAAGAGAAGTACTTGTACAAATACCAGATGTAAATTGGGATGATGTAGGTGGA TTAGATGATGCAAAACAAGAACTAAAAGAAGCAATTGAATGGCCACTAAAAAATCCTGAAAAATTCAAAGAATTTGGAAT TAACCCACCAAAAGGTGTTCTACTAACTGGAGTTCCAGGAACTGGTAAAACATTACTAGCAAAAGCTGTAGCAAATGAAA GTGATGCTAACTTCATATCTGTAAAAGGACCAGAACTATTATCTAAATGGGTTGGAGATTCTGAAAAAGGAATAAGAGAA GTATTTAGAAAAGCAAGACAAACAGCACCAACAGTAATATTCTTTGATGAAATTGATGCAATAGCATCAACAAGAGGATA CTCAGCTGGAGATAGTGGTGTAACACAAAGAGTTGTAAATCAACTTCTTACTGAAATGGATGGAATGGAAGAATTACATG ACATATCAGTTATAGCTGCAACTAACCGTAAAGACATTATAGACCCAGCATTACTAAGACCGGGAAGATTTGACAGACAT GTTGAAGTAGGTCTTCCAGATGAAGAATCAAGAGAATCAATATTCAAAGTACATACAAAGAATATGCCATTATCAGATGA TGTTGACATACACACACTCGCAAAAGAAGCTGAAGGATTTGTAGGAGCAGATATTGAAGCTGTATGCCGTGAAGCTGTAA TGTTAACATTAAGAAAAAATCTTGAAGCAAATATTGTACACATGTCTGAATTTGAAGAAGCAATGAAAAAAGTAAAACCA ACAAAAGACAGTGAACTTGTTTCATACAACTAA
Upstream 100 bases:
>100_bases AAAATAGATATAATTATTATTACAAAAAGTAATAAAAAAGAAAACAACATTAAATTCATAAAATATATCATATTAAAAAA AAATATAAGGAGGTAATACT
Downstream 100 bases:
>100_bases ACATCAACAAAATGTAGAAACTTCTAAATTTCTACATTTATTTTTTCATAAACTATTTTTAAAATAAAATTATTAATAAT TTAATACAACTTCCTTTATA
Product: CdcH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MTDELKLKVAEAFSQGDIGRSIARIDPKCMDELNLKDGDIIEIEGNKITTATVVESKSDVSLGILRIDSYLRKNAGTSIG EEVTIRPATIKEAKKVKLAPVDQEIAIQGNLNSVFLNRTVNKGDIIITGVRKQQPKTSSMMFDDLINQMMSNMASIGEIK LAVVNTKPLGPVKITENTQIEMETKPVDPSKFEGVENLIDVSYEDIGGLKNEVKKIREMVEIPLKRPELFKQLGISAPKG VLLHGPPGTGKTLLAKAVANETNAHFIVINGPEIMSKYVGGSEEQLRELFEEAEENSPSIIFIDELDAIAPKREEVSGDV ERRTVAQLLTLMDGLKSRGEVVVIGATNRPDAIDAALRRPGRFDREIEIGVPDKEERKEILEVHTRHMPLDDDVNLDELT EVTHGFVGADLEALCKEAAMRVLRRILPEIQTDKEVPQEVLEKMVLHKKDFKNALKEIQPSALREVLVQIPDVNWDDVGG LDDAKQELKEAIEWPLKNPEKFKEFGINPPKGVLLTGVPGTGKTLLAKAVANESDANFISVKGPELLSKWVGDSEKGIRE VFRKARQTAPTVIFFDEIDAIASTRGYSAGDSGVTQRVVNQLLTEMDGMEELHDISVIAATNRKDIIDPALLRPGRFDRH VEVGLPDEESRESIFKVHTKNMPLSDDVDIHTLAKEAEGFVGADIEAVCREAVMLTLRKNLEANIVHMSEFEEAMKKVKP TKDSELVSYN
Sequences:
>Translated_730_residues MTDELKLKVAEAFSQGDIGRSIARIDPKCMDELNLKDGDIIEIEGNKITTATVVESKSDVSLGILRIDSYLRKNAGTSIG EEVTIRPATIKEAKKVKLAPVDQEIAIQGNLNSVFLNRTVNKGDIIITGVRKQQPKTSSMMFDDLINQMMSNMASIGEIK LAVVNTKPLGPVKITENTQIEMETKPVDPSKFEGVENLIDVSYEDIGGLKNEVKKIREMVEIPLKRPELFKQLGISAPKG VLLHGPPGTGKTLLAKAVANETNAHFIVINGPEIMSKYVGGSEEQLRELFEEAEENSPSIIFIDELDAIAPKREEVSGDV ERRTVAQLLTLMDGLKSRGEVVVIGATNRPDAIDAALRRPGRFDREIEIGVPDKEERKEILEVHTRHMPLDDDVNLDELT EVTHGFVGADLEALCKEAAMRVLRRILPEIQTDKEVPQEVLEKMVLHKKDFKNALKEIQPSALREVLVQIPDVNWDDVGG LDDAKQELKEAIEWPLKNPEKFKEFGINPPKGVLLTGVPGTGKTLLAKAVANESDANFISVKGPELLSKWVGDSEKGIRE VFRKARQTAPTVIFFDEIDAIASTRGYSAGDSGVTQRVVNQLLTEMDGMEELHDISVIAATNRKDIIDPALLRPGRFDRH VEVGLPDEESRESIFKVHTKNMPLSDDVDIHTLAKEAEGFVGADIEAVCREAVMLTLRKNLEANIVHMSEFEEAMKKVKP TKDSELVSYN >Mature_729_residues TDELKLKVAEAFSQGDIGRSIARIDPKCMDELNLKDGDIIEIEGNKITTATVVESKSDVSLGILRIDSYLRKNAGTSIGE EVTIRPATIKEAKKVKLAPVDQEIAIQGNLNSVFLNRTVNKGDIIITGVRKQQPKTSSMMFDDLINQMMSNMASIGEIKL AVVNTKPLGPVKITENTQIEMETKPVDPSKFEGVENLIDVSYEDIGGLKNEVKKIREMVEIPLKRPELFKQLGISAPKGV LLHGPPGTGKTLLAKAVANETNAHFIVINGPEIMSKYVGGSEEQLRELFEEAEENSPSIIFIDELDAIAPKREEVSGDVE RRTVAQLLTLMDGLKSRGEVVVIGATNRPDAIDAALRRPGRFDREIEIGVPDKEERKEILEVHTRHMPLDDDVNLDELTE VTHGFVGADLEALCKEAAMRVLRRILPEIQTDKEVPQEVLEKMVLHKKDFKNALKEIQPSALREVLVQIPDVNWDDVGGL DDAKQELKEAIEWPLKNPEKFKEFGINPPKGVLLTGVPGTGKTLLAKAVANESDANFISVKGPELLSKWVGDSEKGIREV FRKARQTAPTVIFFDEIDAIASTRGYSAGDSGVTQRVVNQLLTEMDGMEELHDISVIAATNRKDIIDPALLRPGRFDRHV EVGLPDEESRESIFKVHTKNMPLSDDVDIHTLAKEAEGFVGADIEAVCREAVMLTLRKNLEANIVHMSEFEEAMKKVKPT KDSELVSYN
Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]
Homologues:
Organism=Homo sapiens, GI6005942, Length=705, Percent_Identity=47.5177304964539, Blast_Score=632, Evalue=0.0, Organism=Homo sapiens, GI157671927, Length=529, Percent_Identity=54.0642722117202, Blast_Score=595, Evalue=1e-170, Organism=Homo sapiens, GI45643125, Length=593, Percent_Identity=45.8684654300169, Blast_Score=499, Evalue=1e-141, Organism=Homo sapiens, GI45643123, Length=593, Percent_Identity=45.8684654300169, Blast_Score=498, Evalue=1e-141, Organism=Homo sapiens, GI229577436, Length=541, Percent_Identity=44.916820702403, Blast_Score=440, Evalue=1e-123, Organism=Homo sapiens, GI4505725, Length=483, Percent_Identity=38.5093167701863, Blast_Score=291, Evalue=1e-78, Organism=Homo sapiens, GI194018488, Length=717, Percent_Identity=30.9623430962343, Blast_Score=286, Evalue=6e-77, Organism=Homo sapiens, GI24497618, Length=286, Percent_Identity=47.2027972027972, Blast_Score=261, Evalue=2e-69, Organism=Homo sapiens, GI153792536, Length=273, Percent_Identity=47.2527472527472, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI24430151, Length=230, Percent_Identity=49.5652173913044, Blast_Score=239, Evalue=7e-63, Organism=Homo sapiens, GI24497435, Length=261, Percent_Identity=48.2758620689655, Blast_Score=236, Evalue=8e-62, Organism=Homo sapiens, GI24430155, Length=281, Percent_Identity=44.1281138790036, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI5729991, Length=281, Percent_Identity=44.1281138790036, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI89064750, Length=281, Percent_Identity=44.1281138790036, Blast_Score=234, Evalue=3e-61, Organism=Homo sapiens, GI195539395, Length=256, Percent_Identity=44.921875, Blast_Score=229, Evalue=8e-60, Organism=Homo sapiens, GI21361144, Length=261, Percent_Identity=44.8275862068966, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI4506209, Length=263, Percent_Identity=44.8669201520913, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI300192933, Length=252, Percent_Identity=43.2539682539683, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI156564401, Length=406, Percent_Identity=35.7142857142857, Blast_Score=199, Evalue=8e-51, Organism=Homo sapiens, GI4507173, Length=252, Percent_Identity=42.0634920634921, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI5901990, Length=278, Percent_Identity=42.4460431654676, Blast_Score=190, Evalue=5e-48, Organism=Homo sapiens, GI226371754, Length=264, Percent_Identity=39.3939393939394, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI21327685, Length=255, Percent_Identity=40.3921568627451, Blast_Score=183, Evalue=6e-46, Organism=Homo sapiens, GI7657689, Length=255, Percent_Identity=40.3921568627451, Blast_Score=183, Evalue=6e-46, Organism=Homo sapiens, GI7019569, Length=247, Percent_Identity=38.4615384615385, Blast_Score=180, Evalue=5e-45, Organism=Homo sapiens, GI310125282, Length=250, Percent_Identity=42.4, Blast_Score=180, Evalue=5e-45, Organism=Homo sapiens, GI310125280, Length=241, Percent_Identity=42.7385892116183, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI14149767, Length=246, Percent_Identity=39.8373983739837, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI62177112, Length=246, Percent_Identity=39.8373983739837, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI31742536, Length=293, Percent_Identity=35.1535836177474, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI112789543, Length=293, Percent_Identity=35.1535836177474, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI11875211, Length=293, Percent_Identity=39.2491467576792, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI40806170, Length=293, Percent_Identity=39.2491467576792, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI17865802, Length=247, Percent_Identity=37.6518218623482, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI31377644, Length=270, Percent_Identity=35.5555555555556, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI64084766, Length=271, Percent_Identity=31.3653136531365, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI40806173, Length=138, Percent_Identity=45.6521739130435, Blast_Score=115, Evalue=2e-25, Organism=Homo sapiens, GI116292174, Length=303, Percent_Identity=28.7128712871287, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI75677353, Length=322, Percent_Identity=25.776397515528, Blast_Score=70, Evalue=8e-12, Organism=Escherichia coli, GI1789568, Length=245, Percent_Identity=46.1224489795918, Blast_Score=222, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17532375, Length=687, Percent_Identity=47.45269286754, Blast_Score=634, Evalue=0.0, Organism=Caenorhabditis elegans, GI17531535, Length=689, Percent_Identity=46.0087082728592, Blast_Score=611, Evalue=1e-175, Organism=Caenorhabditis elegans, GI17537217, Length=590, Percent_Identity=40.8474576271186, Blast_Score=416, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17508053, Length=528, Percent_Identity=38.2575757575758, Blast_Score=338, Evalue=7e-93, Organism=Caenorhabditis elegans, GI17554786, Length=261, Percent_Identity=48.2758620689655, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17563250, Length=254, Percent_Identity=45.6692913385827, Blast_Score=235, Evalue=7e-62, Organism=Caenorhabditis elegans, GI25144278, Length=281, Percent_Identity=45.5516014234875, Blast_Score=234, Evalue=2e-61, Organism=Caenorhabditis elegans, GI25144281, Length=281, Percent_Identity=45.5516014234875, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71987364, Length=256, Percent_Identity=45.703125, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71987372, Length=256, Percent_Identity=45.703125, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI193206114, Length=275, Percent_Identity=42.5454545454545, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI193206116, Length=275, Percent_Identity=42.5454545454545, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI133931034, Length=275, Percent_Identity=42.5454545454545, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI25153574, Length=476, Percent_Identity=33.6134453781513, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17505546, Length=268, Percent_Identity=43.2835820895522, Blast_Score=226, Evalue=4e-59, Organism=Caenorhabditis elegans, GI17554784, Length=291, Percent_Identity=42.2680412371134, Blast_Score=222, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17563248, Length=264, Percent_Identity=43.9393939393939, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17508701, Length=261, Percent_Identity=42.911877394636, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17562804, Length=468, Percent_Identity=31.4102564102564, Blast_Score=209, Evalue=6e-54, Organism=Caenorhabditis elegans, GI193209502, Length=225, Percent_Identity=46.2222222222222, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI133901662, Length=409, Percent_Identity=34.2298288508557, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI133901658, Length=409, Percent_Identity=34.2298288508557, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71994521, Length=252, Percent_Identity=45.6349206349206, Blast_Score=192, Evalue=7e-49, Organism=Caenorhabditis elegans, GI115534323, Length=247, Percent_Identity=42.1052631578947, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI25146157, Length=347, Percent_Identity=36.0230547550432, Blast_Score=179, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17554264, Length=238, Percent_Identity=43.6974789915966, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17508421, Length=288, Percent_Identity=38.1944444444444, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI32563584, Length=294, Percent_Identity=37.4149659863946, Blast_Score=165, Evalue=7e-41, Organism=Caenorhabditis elegans, GI86561515, Length=237, Percent_Identity=37.9746835443038, Blast_Score=163, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17560432, Length=272, Percent_Identity=38.9705882352941, Blast_Score=162, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17541226, Length=286, Percent_Identity=32.5174825174825, Blast_Score=155, Evalue=9e-38, Organism=Caenorhabditis elegans, GI17541224, Length=286, Percent_Identity=32.5174825174825, Blast_Score=155, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17570397, Length=102, Percent_Identity=44.1176470588235, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI32566590, Length=102, Percent_Identity=44.1176470588235, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71990294, Length=144, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6320077, Length=705, Percent_Identity=47.9432624113475, Blast_Score=635, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323429, Length=535, Percent_Identity=48.785046728972, Blast_Score=517, Evalue=1e-147, Organism=Saccharomyces cerevisiae, GI6322994, Length=617, Percent_Identity=41.3290113452188, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6324000, Length=544, Percent_Identity=31.8014705882353, Blast_Score=253, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321709, Length=273, Percent_Identity=46.8864468864469, Blast_Score=251, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6322651, Length=497, Percent_Identity=32.9979879275654, Blast_Score=250, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6321390, Length=254, Percent_Identity=46.8503937007874, Blast_Score=235, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6322704, Length=279, Percent_Identity=42.2939068100358, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320197, Length=226, Percent_Identity=50, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320602, Length=246, Percent_Identity=45.5284552845528, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6324691, Length=267, Percent_Identity=43.4456928838951, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6324833, Length=256, Percent_Identity=45.3125, Blast_Score=216, Evalue=9e-57, Organism=Saccharomyces cerevisiae, GI6320854, Length=255, Percent_Identity=42.3529411764706, Blast_Score=206, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319554, Length=405, Percent_Identity=34.8148148148148, Blast_Score=201, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6323736, Length=250, Percent_Identity=42, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6325281, Length=255, Percent_Identity=42.7450980392157, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6325431, Length=246, Percent_Identity=39.4308943089431, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6325183, Length=294, Percent_Identity=38.7755102040816, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6321465, Length=224, Percent_Identity=40.625, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320887, Length=297, Percent_Identity=36.3636363636364, Blast_Score=156, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6320583, Length=149, Percent_Identity=31.5436241610738, Blast_Score=82, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI9755327, Length=243, Percent_Identity=28.3950617283951, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI17137560, Length=697, Percent_Identity=45.480631276901, Blast_Score=618, Evalue=1e-177, Organism=Drosophila melanogaster, GI161076486, Length=697, Percent_Identity=45.480631276901, Blast_Score=618, Evalue=1e-177, Organism=Drosophila melanogaster, GI161076488, Length=688, Percent_Identity=45.9302325581395, Blast_Score=618, Evalue=1e-177, Organism=Drosophila melanogaster, GI19921202, Length=587, Percent_Identity=37.8194207836457, Blast_Score=407, Evalue=1e-113, Organism=Drosophila melanogaster, GI24660075, Length=282, Percent_Identity=47.5177304964539, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI45552965, Length=282, Percent_Identity=47.5177304964539, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI281365776, Length=282, Percent_Identity=47.5177304964539, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI24656825, Length=507, Percent_Identity=31.5581854043393, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI21355121, Length=475, Percent_Identity=32.6315789473684, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24656820, Length=526, Percent_Identity=30.4182509505703, Blast_Score=242, Evalue=7e-64, Organism=Drosophila melanogaster, GI17738151, Length=261, Percent_Identity=46.360153256705, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24649446, Length=233, Percent_Identity=48.4978540772532, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI19920408, Length=261, Percent_Identity=48.2758620689655, Blast_Score=236, Evalue=6e-62, Organism=Drosophila melanogaster, GI18860063, Length=279, Percent_Identity=43.7275985663082, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI24651451, Length=260, Percent_Identity=48.0769230769231, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI281361487, Length=247, Percent_Identity=45.3441295546559, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24652279, Length=208, Percent_Identity=52.8846153846154, Blast_Score=233, Evalue=4e-61, Organism=Drosophila melanogaster, GI17137738, Length=249, Percent_Identity=47.3895582329317, Blast_Score=232, Evalue=9e-61, Organism=Drosophila melanogaster, GI281363136, Length=510, Percent_Identity=32.9411764705882, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI78707192, Length=510, Percent_Identity=32.9411764705882, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24640100, Length=256, Percent_Identity=45.703125, Blast_Score=226, Evalue=5e-59, Organism=Drosophila melanogaster, GI24663015, Length=256, Percent_Identity=44.140625, Blast_Score=219, Evalue=8e-57, Organism=Drosophila melanogaster, GI28574878, Length=249, Percent_Identity=44.1767068273092, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI24665814, Length=249, Percent_Identity=44.1767068273092, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI17864540, Length=412, Percent_Identity=35.9223300970874, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI24658770, Length=248, Percent_Identity=45.1612903225806, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI28573010, Length=408, Percent_Identity=35.0490196078431, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24639391, Length=247, Percent_Identity=42.914979757085, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24644145, Length=243, Percent_Identity=43.2098765432099, Blast_Score=187, Evalue=3e-47, Organism=Drosophila melanogaster, GI24581396, Length=308, Percent_Identity=37.012987012987, Blast_Score=185, Evalue=1e-46, Organism=Drosophila melanogaster, GI281360146, Length=241, Percent_Identity=41.9087136929461, Blast_Score=179, Evalue=8e-45, Organism=Drosophila melanogaster, GI281360138, Length=241, Percent_Identity=41.9087136929461, Blast_Score=179, Evalue=8e-45, Organism=Drosophila melanogaster, GI281360142, Length=241, Percent_Identity=41.9087136929461, Blast_Score=179, Evalue=8e-45, Organism=Drosophila melanogaster, GI21357333, Length=241, Percent_Identity=41.9087136929461, Blast_Score=179, Evalue=8e-45, Organism=Drosophila melanogaster, GI281360144, Length=241, Percent_Identity=41.9087136929461, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI281360140, Length=241, Percent_Identity=41.9087136929461, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI281360136, Length=241, Percent_Identity=41.9087136929461, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI24644411, Length=241, Percent_Identity=41.9087136929461, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI18859657, Length=247, Percent_Identity=41.2955465587045, Blast_Score=176, Evalue=6e-44, Organism=Drosophila melanogaster, GI20129423, Length=232, Percent_Identity=37.9310344827586, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI20129529, Length=248, Percent_Identity=37.9032258064516, Blast_Score=165, Evalue=1e-40, Organism=Drosophila melanogaster, GI28571849, Length=276, Percent_Identity=38.768115942029, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI28571847, Length=276, Percent_Identity=38.768115942029, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI45554047, Length=166, Percent_Identity=43.3734939759036, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI24639486, Length=233, Percent_Identity=34.7639484978541, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI28573181, Length=163, Percent_Identity=31.9018404907975, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI20129417, Length=165, Percent_Identity=30.9090909090909, Blast_Score=76, Evalue=1e-13, Organism=Drosophila melanogaster, GI24583262, Length=165, Percent_Identity=30.9090909090909, Blast_Score=76, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR003593 - InterPro: IPR005938 - InterPro: IPR003959 - InterPro: IPR003960 - InterPro: IPR003338 - InterPro: IPR004201 - InterPro: IPR001984 - InterPro: IPR015415 [H]
Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 80795; Mature: 80663
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00674 AAA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDELKLKVAEAFSQGDIGRSIARIDPKCMDELNLKDGDIIEIEGNKITTATVVESKSDV CCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCC SLGILRIDSYLRKNAGTSIGEEVTIRPATIKEAKKVKLAPVDQEIAIQGNLNSVFLNRTV EEEHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHCEEECCCCCCEEEECCCCEEEEECCC NKGDIIITGVRKQQPKTSSMMFDDLINQMMSNMASIGEIKLAVVNTKPLGPVKITENTQI CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEECCCCEE EMETKPVDPSKFEGVENLIDVSYEDIGGLKNEVKKIREMVEIPLKRPELFKQLGISAPKG EEECCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC VLLHGPPGTGKTLLAKAVANETNAHFIVINGPEIMSKYVGGSEEQLRELFEEAEENSPSI EEEECCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHCCCCCE IFIDELDAIAPKREEVSGDVERRTVAQLLTLMDGLKSRGEVVVIGATNRPDAIDAALRRP EEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC GRFDREIEIGVPDKEERKEILEVHTRHMPLDDDVNLDELTEVTHGFVGADLEALCKEAAM CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH RVLRRILPEIQTDKEVPQEVLEKMVLHKKDFKNALKEIQPSALREVLVQIPDVNWDDVGG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC LDDAKQELKEAIEWPLKNPEKFKEFGINPPKGVLLTGVPGTGKTLLAKAVANESDANFIS CCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEE VKGPELLSKWVGDSEKGIREVFRKARQTAPTVIFFDEIDAIASTRGYSAGDSGVTQRVVN ECCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHH QLLTEMDGMEELHDISVIAATNRKDIIDPALLRPGRFDRHVEVGLPDEESRESIFKVHTK HHHHHHCCHHHHHHEEEEEECCCCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCC NMPLSDDVDIHTLAKEAEGFVGADIEAVCREAVMLTLRKNLEANIVHMSEFEEAMKKVKP CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCC TKDSELVSYN CCCCCCCCCC >Mature Secondary Structure TDELKLKVAEAFSQGDIGRSIARIDPKCMDELNLKDGDIIEIEGNKITTATVVESKSDV CCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCC SLGILRIDSYLRKNAGTSIGEEVTIRPATIKEAKKVKLAPVDQEIAIQGNLNSVFLNRTV EEEHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHCEEECCCCCCEEEECCCCEEEEECCC NKGDIIITGVRKQQPKTSSMMFDDLINQMMSNMASIGEIKLAVVNTKPLGPVKITENTQI CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEECCCCEE EMETKPVDPSKFEGVENLIDVSYEDIGGLKNEVKKIREMVEIPLKRPELFKQLGISAPKG EEECCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC VLLHGPPGTGKTLLAKAVANETNAHFIVINGPEIMSKYVGGSEEQLRELFEEAEENSPSI EEEECCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHCCCCCE IFIDELDAIAPKREEVSGDVERRTVAQLLTLMDGLKSRGEVVVIGATNRPDAIDAALRRP EEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC GRFDREIEIGVPDKEERKEILEVHTRHMPLDDDVNLDELTEVTHGFVGADLEALCKEAAM CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH RVLRRILPEIQTDKEVPQEVLEKMVLHKKDFKNALKEIQPSALREVLVQIPDVNWDDVGG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC LDDAKQELKEAIEWPLKNPEKFKEFGINPPKGVLLTGVPGTGKTLLAKAVANESDANFIS CCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEE VKGPELLSKWVGDSEKGIREVFRKARQTAPTVIFFDEIDAIASTRGYSAGDSGVTQRVVN ECCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHH QLLTEMDGMEELHDISVIAATNRKDIIDPALLRPGRFDRHVEVGLPDEESRESIFKVHTK HHHHHHCCHHHHHHEEEEEECCCCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCC NMPLSDDVDIHTLAKEAEGFVGADIEAVCREAVMLTLRKNLEANIVHMSEFEEAMKKVKP CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCC TKDSELVSYN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]