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The map label for this gene is 84489858

Identifier: 84489858

GI number: 84489858

Start: 1204909

End: 1205829

Strand: Direct

Name: 84489858

Synonym: Msp_1063

Alternate gene names: NA

Gene position: 1204909-1205829 (Clockwise)

Preceding gene: 84489857

Following gene: 84489859

Centisome position: 68.17

GC content: 29.1

Gene sequence:

>921_bases
ATGAAAAATGCAAAAATACCCTGTATAACAGAATTATCCTTACATAGACCTGAAGTTGTTAGATGGCAACAACGTATGCA
ACTACTCAAACCATATACAGATACTGTAGTTGTATTACCTTGTAGTATGAAAAAACCTTATTCCCAATCTAAATCACATA
CATTATTTCGAAAGTACACAAAAGGTTTACAAGAAGTTATATTAACTTCTCCTTTTGGAATCTGTCCAAGAGAAATGGAA
AAAACATACCCTATTCAATCATATGATGCTTCAACAACAGGTGATTGGTCTGATGAAGAAATAAAAACTTCTGGTAAATG
TTTAAAAGATTATGTTGGAGATAGAAAAGTTATTGCTCATGTAAGTGGTGGTTATAGAGCAGCTTGTGAAGAATATCTAG
ATAATGTTGTTTATACATGTACTGATGGAAATACACGTTCAAACAAATCTCTAGAAAATCTTAAAATAGCTGTTAAAAAG
GCTGATAAAGTAAGTCAATCAAAGCATAGAATTCATGATCTACAATCAATAGCTAGATATCAATTTAACACTAAAAAAGC
AGATAAATTAATACCTGAAAATACACAGACTCGTGGTCGTTTTAATACTAGAATTTTAGTTGATAAAACCCAAATTGCAA
CACTACACTTTGAAACTGGATTATATACATTAAATTTACCTGCTGGTGAAATATTAAAAGAAGAAAAAATTAATAGAGTG
TTTATTAATTTTGATTTACAATCAAATACTTTATTTACACCAGGAATTGATGATGCTGATGAAAATATTATACCTAATGA
TGAAGTTGTTATTATAAATAATGATGAAGTTGTAGGTGTTGGTAAATCAACAATGAGTGGAAAAGAATTAGTAGAATCTA
CTAAAGGTGTTGGTGTTAAAATTAGACACCAGATAAAATAA

Upstream 100 bases:

>100_bases
ACATTAATTAAAATGTTAATTAAGGTTTCACCTAAAGCTTTAGTTAAATTAGGTAAATTATTCTAAAACTCTTATTTACC
CCTTTTTTAAGGAAGATAAT

Downstream 100 bases:

>100_bases
AAAAATATATAAAAAATAAATTTAAAAGTAATTAATAAATAGGAGATAAAAAAATGGTAGATGGCAATATAAAAGATGAA
ATTCAAGATAAATTATCACT

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKNAKIPCITELSLHRPEVVRWQQRMQLLKPYTDTVVVLPCSMKKPYSQSKSHTLFRKYTKGLQEVILTSPFGICPREME
KTYPIQSYDASTTGDWSDEEIKTSGKCLKDYVGDRKVIAHVSGGYRAACEEYLDNVVYTCTDGNTRSNKSLENLKIAVKK
ADKVSQSKHRIHDLQSIARYQFNTKKADKLIPENTQTRGRFNTRILVDKTQIATLHFETGLYTLNLPAGEILKEEKINRV
FINFDLQSNTLFTPGIDDADENIIPNDEVVIINNDEVVGVGKSTMSGKELVESTKGVGVKIRHQIK

Sequences:

>Translated_306_residues
MKNAKIPCITELSLHRPEVVRWQQRMQLLKPYTDTVVVLPCSMKKPYSQSKSHTLFRKYTKGLQEVILTSPFGICPREME
KTYPIQSYDASTTGDWSDEEIKTSGKCLKDYVGDRKVIAHVSGGYRAACEEYLDNVVYTCTDGNTRSNKSLENLKIAVKK
ADKVSQSKHRIHDLQSIARYQFNTKKADKLIPENTQTRGRFNTRILVDKTQIATLHFETGLYTLNLPAGEILKEEKINRV
FINFDLQSNTLFTPGIDDADENIIPNDEVVIINNDEVVGVGKSTMSGKELVESTKGVGVKIRHQIK
>Mature_306_residues
MKNAKIPCITELSLHRPEVVRWQQRMQLLKPYTDTVVVLPCSMKKPYSQSKSHTLFRKYTKGLQEVILTSPFGICPREME
KTYPIQSYDASTTGDWSDEEIKTSGKCLKDYVGDRKVIAHVSGGYRAACEEYLDNVVYTCTDGNTRSNKSLENLKIAVKK
ADKVSQSKHRIHDLQSIARYQFNTKKADKLIPENTQTRGRFNTRILVDKTQIATLHFETGLYTLNLPAGEILKEEKINRV
FINFDLQSNTLFTPGIDDADENIIPNDEVVIINNDEVVGVGKSTMSGKELVESTKGVGVKIRHQIK

Specific function: Unknown

COG id: COG1549

COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR002616 [H]

Pfam domain/function: PF01472 PUA; PF01702 TGT [H]

EC number: NA

Molecular weight: Translated: 34674; Mature: 34674

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAKIPCITELSLHRPEVVRWQQRMQLLKPYTDTVVVLPCSMKKPYSQSKSHTLFRKYT
CCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH
KGLQEVILTSPFGICPREMEKTYPIQSYDASTTGDWSDEEIKTSGKCLKDYVGDRKVIAH
HHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
VSGGYRAACEEYLDNVVYTCTDGNTRSNKSLENLKIAVKKADKVSQSKHRIHDLQSIARY
ECCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHH
QFNTKKADKLIPENTQTRGRFNTRILVDKTQIATLHFETGLYTLNLPAGEILKEEKINRV
HCCCCHHHHCCCCCCCCCCCCCEEEEEECEEEEEEEEECCEEEEECCHHHHHHHCCCCEE
FINFDLQSNTLFTPGIDDADENIIPNDEVVIINNDEVVGVGKSTMSGKELVESTKGVGVK
EEEEEECCCEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHCCCCEE
IRHQIK
EEEECC
>Mature Secondary Structure
MKNAKIPCITELSLHRPEVVRWQQRMQLLKPYTDTVVVLPCSMKKPYSQSKSHTLFRKYT
CCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH
KGLQEVILTSPFGICPREMEKTYPIQSYDASTTGDWSDEEIKTSGKCLKDYVGDRKVIAH
HHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
VSGGYRAACEEYLDNVVYTCTDGNTRSNKSLENLKIAVKKADKVSQSKHRIHDLQSIARY
ECCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHH
QFNTKKADKLIPENTQTRGRFNTRILVDKTQIATLHFETGLYTLNLPAGEILKEEKINRV
HCCCCHHHHCCCCCCCCCCCCCEEEEEECEEEEEEEEECCEEEEECCHHHHHHHCCCCEE
FINFDLQSNTLFTPGIDDADENIIPNDEVVIINNDEVVGVGKSTMSGKELVESTKGVGVK
EEEEEECCCEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHCCCCEE
IRHQIK
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]