| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489830
Identifier: 84489830
GI number: 84489830
Start: 1181231
End: 1181503
Strand: Direct
Name: 84489830
Synonym: Msp_1035
Alternate gene names: NA
Gene position: 1181231-1181503 (Clockwise)
Preceding gene: 84489826
Following gene: 84489831
Centisome position: 66.83
GC content: 26.74
Gene sequence:
>273_bases ATGCGTTTATTAAATGATTTAATTGGAAAAGAAGTTTTAGACCATACAGCATTAGTTATTGGAAAAGTTAAAGATGTGGA AATAGATACCTCATCAAATAAAATTGAATCTGTTATCATATCAAAAGGTGGAATTGGTGAAAGTATTGGAATTTCTAAAG CTGAAAGTTTAGTTCCTTTTGAAATGATAAACCGTATTGGTGATAAAGTAATTCTTAAAAAAGCAATAAATGAAGCAGAA CAACTTGTTGAAGAATTAGAAAATGAAATATAA
Upstream 100 bases:
>100_bases ATAAATCCATATAATAATATAAATTCAATATAAATATTAAAAATAATATTAGCTATCTATAAATTATAAAATATAAAAAA TAAATATCCGAGGGATTTAA
Downstream 100 bases:
>100_bases GGACATATTACAATGACAGACTATAAAAATAAATTAATAAACTTATTAAAAGAAAATAATGTAATTAAATTTGGAAAATT CACATTATCTTCAGGACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MRLLNDLIGKEVLDHTALVIGKVKDVEIDTSSNKIESVIISKGGIGESIGISKAESLVPFEMINRIGDKVILKKAINEAE QLVEELENEI
Sequences:
>Translated_90_residues MRLLNDLIGKEVLDHTALVIGKVKDVEIDTSSNKIESVIISKGGIGESIGISKAESLVPFEMINRIGDKVILKKAINEAE QLVEELENEI >Mature_90_residues MRLLNDLIGKEVLDHTALVIGKVKDVEIDTSSNKIESVIISKGGIGESIGISKAESLVPFEMINRIGDKVILKKAINEAE QLVEELENEI
Specific function: Unknown
COG id: COG1873
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9843; Mature: 9843
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLNDLIGKEVLDHTALVIGKVKDVEIDTSSNKIESVIISKGGIGESIGISKAESLVPF CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCH EMINRIGDKVILKKAINEAEQLVEELENEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLLNDLIGKEVLDHTALVIGKVKDVEIDTSSNKIESVIISKGGIGESIGISKAESLVPF CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCH EMINRIGDKVILKKAINEAEQLVEELENEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA