Click here to switch to the map view.

The map label for this gene is ybjQ [C]

Identifier: 84489804

GI number: 84489804

Start: 1153772

End: 1154083

Strand: Direct

Name: ybjQ [C]

Synonym: Msp_1005

Alternate gene names: 84489804

Gene position: 1153772-1154083 (Clockwise)

Preceding gene: 84489802

Following gene: 84489805

Centisome position: 65.28

GC content: 33.65

Gene sequence:

>312_bases
ATGTTATTGTGCACAACTGAAAATATTGGACATGAATATGAAGTTATTGGTCTTGTACGTGGAAATTGTATTCAATCAAA
AAATATTGTAAGGGATTTTACACAGGGATTAAAGAATATTGTTGGTGGAGAACTTGGTGAATATACTAAGATGATGGAAG
AAGCTCGTACTACAGCAACAGATAGAATGGTTGAACATGCTACTAAATTAAATGCTGATGCTATTGTAATGATACGTTAT
GGTACTGGTTCTGTTAGTCCTGAGTCTGCTGAAGTTTTAGCTTATGGAACTGCTGTTAAATTTACAGATTGA

Upstream 100 bases:

>100_bases
AAAAACAACAATAGATACTAATAATTATAAAATAATAATTTAAAAACAAACATGAACATATCTTTTGTTATAAAAAAAAT
ATCACTAGAGGTTATTAAAA

Downstream 100 bases:

>100_bases
AATTAATCTTTTTTTATTAAAAATTCTATTTTTTTTAGAATAATATATTTATTTTTTTAGACAATAATTAATTATGAATA
AAATAATTACTATAATACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MLLCTTENIGHEYEVIGLVRGNCIQSKNIVRDFTQGLKNIVGGELGEYTKMMEEARTTATDRMVEHATKLNADAIVMIRY
GTGSVSPESAEVLAYGTAVKFTD

Sequences:

>Translated_103_residues
MLLCTTENIGHEYEVIGLVRGNCIQSKNIVRDFTQGLKNIVGGELGEYTKMMEEARTTATDRMVEHATKLNADAIVMIRY
GTGSVSPESAEVLAYGTAVKFTD
>Mature_103_residues
MLLCTTENIGHEYEVIGLVRGNCIQSKNIVRDFTQGLKNIVGGELGEYTKMMEEARTTATDRMVEHATKLNADAIVMIRY
GTGSVSPESAEVLAYGTAVKFTD

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002765 [H]

Pfam domain/function: PF01906 DUF74 [H]

EC number: NA

Molecular weight: Translated: 11275; Mature: 11275

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLCTTENIGHEYEVIGLVRGNCIQSKNIVRDFTQGLKNIVGGELGEYTKMMEEARTTAT
CEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DRMVEHATKLNADAIVMIRYGTGSVSPESAEVLAYGTAVKFTD
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECEEEEECC
>Mature Secondary Structure
MLLCTTENIGHEYEVIGLVRGNCIQSKNIVRDFTQGLKNIVGGELGEYTKMMEEARTTAT
CEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DRMVEHATKLNADAIVMIRYGTGSVSPESAEVLAYGTAVKFTD
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566 [H]