| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489798
Identifier: 84489798
GI number: 84489798
Start: 1147940
End: 1148440
Strand: Direct
Name: 84489798
Synonym: Msp_0999
Alternate gene names: NA
Gene position: 1147940-1148440 (Clockwise)
Preceding gene: 84489797
Following gene: 84489801
Centisome position: 64.95
GC content: 23.35
Gene sequence:
>501_bases ATGTTAACAGAGAAAAATATTAAAAAATATGCAAGTACTGTTTTATTAAATACTGTGGATAATCTATTTGATAATAAAGA AACATTAATTAATAATTTTTATAAGGATTTTGTTGAATCAAATAAGAGAAACAAAAAACTAAAAAGTAATATAAAAGATA ATGAAGTAGTAGATGAATATTTACTTGAAGAATTGGAAAAATCTTTCACACAGAATGATATTGGTCGTGTTTTACAAAAA GAAATGGTAAAAGCAAATGATAATGCAATTGCTGATTTAGCAAATGTATTAGATGAAAAACTACTTCCTGTTAGTAGAGA CCTTAAAAATGTATTCAATGATGATGTAAAATACAATCAATTTAGAAAATATGTTACTGAAAACTTAGTAGTTTCAAATT TAAATCTTAATACTTCAACAATTAAAGCTCTTAAAACCATGAATATATCTGGTATTCAAGCTGCACAAATTATTCAACTA ATAAGTCAAGTGGATAATTAA
Upstream 100 bases:
>100_bases TCACCAACACTTTAGATTGAGTAAGTTAAACTCTAAATACATATATGATAAATTATATATTTTTATTAAAAGAATTATAA AAAATATTTAAGGGATATGG
Downstream 100 bases:
>100_bases AAAAAAAAGTTTAAAGAATCAGACAATTATATCTGATTCATCTATATATTTTGTAACTTCTGTAATTAAGTCATTAAATT CTCGTGATGTTCTATTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MLTEKNIKKYASTVLLNTVDNLFDNKETLINNFYKDFVESNKRNKKLKSNIKDNEVVDEYLLEELEKSFTQNDIGRVLQK EMVKANDNAIADLANVLDEKLLPVSRDLKNVFNDDVKYNQFRKYVTENLVVSNLNLNTSTIKALKTMNISGIQAAQIIQL ISQVDN
Sequences:
>Translated_166_residues MLTEKNIKKYASTVLLNTVDNLFDNKETLINNFYKDFVESNKRNKKLKSNIKDNEVVDEYLLEELEKSFTQNDIGRVLQK EMVKANDNAIADLANVLDEKLLPVSRDLKNVFNDDVKYNQFRKYVTENLVVSNLNLNTSTIKALKTMNISGIQAAQIIQL ISQVDN >Mature_166_residues MLTEKNIKKYASTVLLNTVDNLFDNKETLINNFYKDFVESNKRNKKLKSNIKDNEVVDEYLLEELEKSFTQNDIGRVLQK EMVKANDNAIADLANVLDEKLLPVSRDLKNVFNDDVKYNQFRKYVTENLVVSNLNLNTSTIKALKTMNISGIQAAQIIQL ISQVDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19077; Mature: 19077
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEKNIKKYASTVLLNTVDNLFDNKETLINNFYKDFVESNKRNKKLKSNIKDNEVVDEY CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH LLEELEKSFTQNDIGRVLQKEMVKANDNAIADLANVLDEKLLPVSRDLKNVFNDDVKYNQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH FRKYVTENLVVSNLNLNTSTIKALKTMNISGIQAAQIIQLISQVDN HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLTEKNIKKYASTVLLNTVDNLFDNKETLINNFYKDFVESNKRNKKLKSNIKDNEVVDEY CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH LLEELEKSFTQNDIGRVLQKEMVKANDNAIADLANVLDEKLLPVSRDLKNVFNDDVKYNQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH FRKYVTENLVVSNLNLNTSTIKALKTMNISGIQAAQIIQLISQVDN HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA