| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489774
Identifier: 84489774
GI number: 84489774
Start: 1117465
End: 1118406
Strand: Direct
Name: 84489774
Synonym: Msp_0975
Alternate gene names: NA
Gene position: 1117465-1118406 (Clockwise)
Preceding gene: 84489773
Following gene: 84489779
Centisome position: 63.23
GC content: 24.84
Gene sequence:
>942_bases ATGGAAACTATCTACTGTGCAAACTGTGGACATAAAAACAATATTTCAACTGATACTTGTGAAAAATGTGGTGAAATTTT ACACATATTTACCAATGCAAACAAGGAAATAAATTCTATTAATGAATTATTTACAGATATGCATCTATTTCAATTAAACA ATAAAATATTAAGTTTAGATGCATATGAAACAATAATACAAAGTATTATAGAAGCTGGAAAAAATAGATTAACATATAAA GAATATAGGACACCTTTAGAGCAAATAAAAGCACTTGCTGAAGCATACTCCATACTAATATTTAAGAATGATAGAAAAAA TTATGGAGAATATGCATTTAATGTTATATGTGTTGATGAATGTTTTGATGAAGCAATACAAATAGCAACAATACTTCATG AACTAACACACCATCTTTTTAACACCATACTTTGTTCTATAGTAATGTATGTATGGAATGTGAAAAAAACACCCATGTTA GATGCATTTATACAAACCATGACAACAATTCCCGAAGTTCTATTAATAAGTGAATATTGTGCAAGTAGTACTGAAAAAAT ATATTTACCAGAGGAATATGTGTCTTATTCATCATTTAATTCAATATGTGCAGACTTAAAATATGATAAAACTAAAATTA TGAAATGTTTTATTATAGGAAAAGGAATACATAAAAGTATATGTCAAATATTTGATGCTATAATGGATAATCAACTAAAA GATGATATTAAAAATGAATTTAAAAAATATGATACAACACCTATAGGAAAACCAATCTGTATAAGTGATAACCAATCAAC AAATAATATACTAAGAAATGTTTATATAATGAATCTCATAAACAACAGTTATAACCTAATAAACAATAAAGAAATATATC CTCTTCTTGAAAAAAATAAAAAATACTATGAAAAATCACAAATAAAAGGAGCCTATTACTAA
Upstream 100 bases:
>100_bases CAAAAGAAATGAATATAGAACCAGAAACACTAGCAAAAGAAGTTACACATAACACAAAAGAATTCTTTAGAATATAACAA AAAGAGGATAAAAGATTAAA
Downstream 100 bases:
>100_bases GACTTTACTTTTTTATTATCAAGGGAAATTATTATATCAAAATTAATAGTTTCCACATTTTCTCCACCAATTGCACGTAG TAAATAATTAAATGATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues METIYCANCGHKNNISTDTCEKCGEILHIFTNANKEINSINELFTDMHLFQLNNKILSLDAYETIIQSIIEAGKNRLTYK EYRTPLEQIKALAEAYSILIFKNDRKNYGEYAFNVICVDECFDEAIQIATILHELTHHLFNTILCSIVMYVWNVKKTPML DAFIQTMTTIPEVLLISEYCASSTEKIYLPEEYVSYSSFNSICADLKYDKTKIMKCFIIGKGIHKSICQIFDAIMDNQLK DDIKNEFKKYDTTPIGKPICISDNQSTNNILRNVYIMNLINNSYNLINNKEIYPLLEKNKKYYEKSQIKGAYY
Sequences:
>Translated_313_residues METIYCANCGHKNNISTDTCEKCGEILHIFTNANKEINSINELFTDMHLFQLNNKILSLDAYETIIQSIIEAGKNRLTYK EYRTPLEQIKALAEAYSILIFKNDRKNYGEYAFNVICVDECFDEAIQIATILHELTHHLFNTILCSIVMYVWNVKKTPML DAFIQTMTTIPEVLLISEYCASSTEKIYLPEEYVSYSSFNSICADLKYDKTKIMKCFIIGKGIHKSICQIFDAIMDNQLK DDIKNEFKKYDTTPIGKPICISDNQSTNNILRNVYIMNLINNSYNLINNKEIYPLLEKNKKYYEKSQIKGAYY >Mature_313_residues METIYCANCGHKNNISTDTCEKCGEILHIFTNANKEINSINELFTDMHLFQLNNKILSLDAYETIIQSIIEAGKNRLTYK EYRTPLEQIKALAEAYSILIFKNDRKNYGEYAFNVICVDECFDEAIQIATILHELTHHLFNTILCSIVMYVWNVKKTPML DAFIQTMTTIPEVLLISEYCASSTEKIYLPEEYVSYSSFNSICADLKYDKTKIMKCFIIGKGIHKSICQIFDAIMDNQLK DDIKNEFKKYDTTPIGKPICISDNQSTNNILRNVYIMNLINNSYNLINNKEIYPLLEKNKKYYEKSQIKGAYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36311; Mature: 36311
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIYCANCGHKNNISTDTCEKCGEILHIFTNANKEINSINELFTDMHLFQLNNKILSLD CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEHH AYETIIQSIIEAGKNRLTYKEYRTPLEQIKALAEAYSILIFKNDRKNYGEYAFNVICVDE HHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHEEEEEECCCCCCCCHHEEEEEHHH CFDEAIQIATILHELTHHLFNTILCSIVMYVWNVKKTPMLDAFIQTMTTIPEVLLISEYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASSTEKIYLPEEYVSYSSFNSICADLKYDKTKIMKCFIIGKGIHKSICQIFDAIMDNQLK CCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCHHHHHHHHHHHHHHCCHHH DDIKNEFKKYDTTPIGKPICISDNQSTNNILRNVYIMNLINNSYNLINNKEIYPLLEKNK HHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH KYYEKSQIKGAYY HHHHHHHCCCCCC >Mature Secondary Structure METIYCANCGHKNNISTDTCEKCGEILHIFTNANKEINSINELFTDMHLFQLNNKILSLD CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEHH AYETIIQSIIEAGKNRLTYKEYRTPLEQIKALAEAYSILIFKNDRKNYGEYAFNVICVDE HHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHEEEEEECCCCCCCCHHEEEEEHHH CFDEAIQIATILHELTHHLFNTILCSIVMYVWNVKKTPMLDAFIQTMTTIPEVLLISEYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASSTEKIYLPEEYVSYSSFNSICADLKYDKTKIMKCFIIGKGIHKSICQIFDAIMDNQLK CCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCHHHHHHHHHHHHHHCCHHH DDIKNEFKKYDTTPIGKPICISDNQSTNNILRNVYIMNLINNSYNLINNKEIYPLLEKNK HHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH KYYEKSQIKGAYY HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA