Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

Click here to switch to the map view.

The map label for this gene is 84489518

Identifier: 84489518

GI number: 84489518

Start: 816357

End: 817133

Strand: Direct

Name: 84489518

Synonym: Msp_0709

Alternate gene names: NA

Gene position: 816357-817133 (Clockwise)

Preceding gene: 84489516

Following gene: 84489519

Centisome position: 46.19

GC content: 24.32

Gene sequence:

>777_bases
ATGAAAAAAGGTGAAAGATATGAAAATCCTTATTTAACTGAAGTTATAGTAAGGATTAATTTTTCTACAATACTTGCATT
ATCAGGTAATAATGAAAGTGCTGCAGAAGATTTTCGTAAGAATATATTTGAACAATATCCAATAGCCTTACTGAAAAAAA
ATCATGAAGTGAATATTGGATTAAATATTCAATCAGATGGCTTTAATCAAATTAATCAAAGAGATAAAATAATATGGGAA
TTTAAAAATAAAGAAGATAATAAAAAAATAGAATTATCTGATTCATATGTTTTATTAACATACACTAAAGAAGCTTATAC
CAATTTCCGATATTTACTACAAGACATCATATTAATATTAGATGCATTGAAAAAATATTCTCCTATAAACCCACATTTAC
TCCAGTTACGATATATTAATCAACTATCAGGTAAATCAATTGAAGAATTAACTAAATGCATTAACAAACCTTATTTCAAT
GAAGAGATAATAGATTTAAATGGTAAGGATACCTTTGTTCAAAATCTAAGTAGATTAACAATAACTGAAGGAAAATATCT
TTTAAATACCCAATATGGACTGTTTAATCCAGGTTATCCGAATCCAAATTTTGAAAAGAATTATATACTTGATTTTGACT
GTAGTTTTTATAACATTGAATCAATGAATCAAATAAATGAAGAATTAAAAGAAATGAATTATTTTATATGGAAGCAATTC
CAATTAGCTATAACAGATAAACTAAAAAAAGAAATGAAAGGTGAATTAGATGAATGA

Upstream 100 bases:

>100_bases
TGTTTGGTAATATTTTTTAATATAATTAGTATGACTTAAATAATAAATACTTCTTAAAAGATAACTATCAATAGAAAGAA
TTAATGGAGAAATTTTTATT

Downstream 100 bases:

>100_bases
AACAATATCATATAATGAATTAGAAAAAACCAATTCAAATAATATTCACCCTTATTCTGAACATAGTAAAACAATAAGCA
CTGACGATTATTTTAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKKGERYENPYLTEVIVRINFSTILALSGNNESAAEDFRKNIFEQYPIALLKKNHEVNIGLNIQSDGFNQINQRDKIIWE
FKNKEDNKKIELSDSYVLLTYTKEAYTNFRYLLQDIILILDALKKYSPINPHLLQLRYINQLSGKSIEELTKCINKPYFN
EEIIDLNGKDTFVQNLSRLTITEGKYLLNTQYGLFNPGYPNPNFEKNYILDFDCSFYNIESMNQINEELKEMNYFIWKQF
QLAITDKLKKEMKGELDE

Sequences:

>Translated_258_residues
MKKGERYENPYLTEVIVRINFSTILALSGNNESAAEDFRKNIFEQYPIALLKKNHEVNIGLNIQSDGFNQINQRDKIIWE
FKNKEDNKKIELSDSYVLLTYTKEAYTNFRYLLQDIILILDALKKYSPINPHLLQLRYINQLSGKSIEELTKCINKPYFN
EEIIDLNGKDTFVQNLSRLTITEGKYLLNTQYGLFNPGYPNPNFEKNYILDFDCSFYNIESMNQINEELKEMNYFIWKQF
QLAITDKLKKEMKGELDE
>Mature_258_residues
MKKGERYENPYLTEVIVRINFSTILALSGNNESAAEDFRKNIFEQYPIALLKKNHEVNIGLNIQSDGFNQINQRDKIIWE
FKNKEDNKKIELSDSYVLLTYTKEAYTNFRYLLQDIILILDALKKYSPINPHLLQLRYINQLSGKSIEELTKCINKPYFN
EEIIDLNGKDTFVQNLSRLTITEGKYLLNTQYGLFNPGYPNPNFEKNYILDFDCSFYNIESMNQINEELKEMNYFIWKQF
QLAITDKLKKEMKGELDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30527; Mature: 30527

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGERYENPYLTEVIVRINFSTILALSGNNESAAEDFRKNIFEQYPIALLKKNHEVNIG
CCCCCCCCCCHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCCCEEEEE
LNIQSDGFNQINQRDKIIWEFKNKEDNKKIELSDSYVLLTYTKEAYTNFRYLLQDIILIL
EEECCCCCHHHCCCCCEEEEECCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHH
DALKKYSPINPHLLQLRYINQLSGKSIEELTKCINKPYFNEEIIDLNGKDTFVQNLSRLT
HHHHHCCCCCHHHHHEEHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHEE
ITEGKYLLNTQYGLFNPGYPNPNFEKNYILDFDCSFYNIESMNQINEELKEMNYFIWKQF
EECCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHH
QLAITDKLKKEMKGELDE
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKGERYENPYLTEVIVRINFSTILALSGNNESAAEDFRKNIFEQYPIALLKKNHEVNIG
CCCCCCCCCCHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCCCEEEEE
LNIQSDGFNQINQRDKIIWEFKNKEDNKKIELSDSYVLLTYTKEAYTNFRYLLQDIILIL
EEECCCCCHHHCCCCCEEEEECCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHH
DALKKYSPINPHLLQLRYINQLSGKSIEELTKCINKPYFNEEIIDLNGKDTFVQNLSRLT
HHHHHCCCCCHHHHHEEHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHEE
ITEGKYLLNTQYGLFNPGYPNPNFEKNYILDFDCSFYNIESMNQINEELKEMNYFIWKQF
EECCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHH
QLAITDKLKKEMKGELDE
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA