| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489519
Identifier: 84489519
GI number: 84489519
Start: 817126
End: 817584
Strand: Direct
Name: 84489519
Synonym: Msp_0710
Alternate gene names: NA
Gene position: 817126-817584 (Clockwise)
Preceding gene: 84489518
Following gene: 84489520
Centisome position: 46.23
GC content: 21.57
Gene sequence:
>459_bases ATGAATGAAACAATATCATATAATGAATTAGAAAAAACCAATTCAAATAATATTCACCCTTATTCTGAACATAGTAAAAC AATAAGCACTGACGATTATTTTAAACAACTTTCAGAAAATAAATTCTATTCTGAATTCCAAGAATATTTATCAAACAATT ATTCACTTATTAACAAAGAAGAAATAATTAATTTTATAAGTTATAAACCATTACTTACAGAGCTCATTAAAGAATTAACT GTAATAATTAGAAAAAGTTTTGAAAAAAATGAATTAAGTATGGAATTCATACAAGATCCAGAAATAACTGACTTAAAATA TTTAAATATATATATCCATTCTAGTGAAGAATCATTTAATAAAGATTGGAATACTTTGAAAATAATAAACCAAGATATTA GACAATTAAAATTACTGGATAATTCAATCAAAAAATATATACTGGTGGATTTGTGGTAA
Upstream 100 bases:
>100_bases CAAATAAATGAAGAATTAAAAGAAATGAATTATTTTATATGGAAGCAATTCCAATTAGCTATAACAGATAAACTAAAAAA AGAAATGAAAGGTGAATTAG
Downstream 100 bases:
>100_bases AATATGGGGTTTGATTGGAAAAAATATCACGAGGTAGGGGAACATCTTAAAAACTATTCTGAAGATGAAGCATATCAACG TGCAGCTATCAGCAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKEEIINFISYKPLLTELIKELT VIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFNKDWNTLKIINQDIRQLKLLDNSIKKYILVDLW
Sequences:
>Translated_152_residues MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKEEIINFISYKPLLTELIKELT VIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFNKDWNTLKIINQDIRQLKLLDNSIKKYILVDLW >Mature_152_residues MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKEEIINFISYKPLLTELIKELT VIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFNKDWNTLKIINQDIRQLKLLDNSIKKYILVDLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18309; Mature: 18309
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKE CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH EIINFISYKPLLTELIKELTVIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFN HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCC KDWNTLKIINQDIRQLKLLDNSIKKYILVDLW CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKE CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH EIINFISYKPLLTELIKELTVIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFN HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCC KDWNTLKIINQDIRQLKLLDNSIKKYILVDLW CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA