Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489519

Identifier: 84489519

GI number: 84489519

Start: 817126

End: 817584

Strand: Direct

Name: 84489519

Synonym: Msp_0710

Alternate gene names: NA

Gene position: 817126-817584 (Clockwise)

Preceding gene: 84489518

Following gene: 84489520

Centisome position: 46.23

GC content: 21.57

Gene sequence:

>459_bases
ATGAATGAAACAATATCATATAATGAATTAGAAAAAACCAATTCAAATAATATTCACCCTTATTCTGAACATAGTAAAAC
AATAAGCACTGACGATTATTTTAAACAACTTTCAGAAAATAAATTCTATTCTGAATTCCAAGAATATTTATCAAACAATT
ATTCACTTATTAACAAAGAAGAAATAATTAATTTTATAAGTTATAAACCATTACTTACAGAGCTCATTAAAGAATTAACT
GTAATAATTAGAAAAAGTTTTGAAAAAAATGAATTAAGTATGGAATTCATACAAGATCCAGAAATAACTGACTTAAAATA
TTTAAATATATATATCCATTCTAGTGAAGAATCATTTAATAAAGATTGGAATACTTTGAAAATAATAAACCAAGATATTA
GACAATTAAAATTACTGGATAATTCAATCAAAAAATATATACTGGTGGATTTGTGGTAA

Upstream 100 bases:

>100_bases
CAAATAAATGAAGAATTAAAAGAAATGAATTATTTTATATGGAAGCAATTCCAATTAGCTATAACAGATAAACTAAAAAA
AGAAATGAAAGGTGAATTAG

Downstream 100 bases:

>100_bases
AATATGGGGTTTGATTGGAAAAAATATCACGAGGTAGGGGAACATCTTAAAAACTATTCTGAAGATGAAGCATATCAACG
TGCAGCTATCAGCAGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKEEIINFISYKPLLTELIKELT
VIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFNKDWNTLKIINQDIRQLKLLDNSIKKYILVDLW

Sequences:

>Translated_152_residues
MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKEEIINFISYKPLLTELIKELT
VIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFNKDWNTLKIINQDIRQLKLLDNSIKKYILVDLW
>Mature_152_residues
MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKEEIINFISYKPLLTELIKELT
VIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFNKDWNTLKIINQDIRQLKLLDNSIKKYILVDLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18309; Mature: 18309

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKE
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH
EIINFISYKPLLTELIKELTVIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFN
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCC
KDWNTLKIINQDIRQLKLLDNSIKKYILVDLW
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MNETISYNELEKTNSNNIHPYSEHSKTISTDDYFKQLSENKFYSEFQEYLSNNYSLINKE
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH
EIINFISYKPLLTELIKELTVIIRKSFEKNELSMEFIQDPEITDLKYLNIYIHSSEESFN
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCC
KDWNTLKIINQDIRQLKLLDNSIKKYILVDLW
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA