| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is mjaIIIM [H]
Identifier: 84488972
GI number: 84488972
Start: 167844
End: 168782
Strand: Direct
Name: mjaIIIM [H]
Synonym: Msp_0143
Alternate gene names: 84488972
Gene position: 167844-168782 (Clockwise)
Preceding gene: 84488969
Following gene: 84488973
Centisome position: 9.5
GC content: 23.32
Gene sequence:
>939_bases ATGCAAGTAACTTTATTTAATGACAATATTGTAGAAGGAAAGCCTTTTATGAAATGGCTTGGTGGAAAAAGACAATTAAT TCCTGAGATAGAAAAAAGATTACCAGAACATATTAAGATATCAAAGAAAATAGATTCATATTTTGAACCCTTTATTGGTG GAGGAGCTTTATTTTTTTATCTTATGAGTAATTATCATATTAAAAAAGCATATATTTCTGATATTAATAAAGAATTGATA TTAATATATAATGCTATAAAAAATGATGATAAAAAAGTAATTACTTATTTAAAAGAAATGGAAAGTGAATTTTTAAAATT AGATAATGATAAACGTAAAGCATATTATTTAAATGTTAGAGAAGAATTTAATAATCAATTAAAAACATATGATTTTAAAA ATTATTCTGAAGAAACAATAAAAAGAGCTGTTAAATCAATGTTCATGAATAAAACAGGATTTAATGGATTATTTAGATTA AATAAGAAAGGTGAATTTAACGTGCCTTTTGGAAGATATAAAAATCCTAAAATATGTGATGAAACCAATATTCATAATGT TCATAAAATTCTAAAAAATGTTACTATAAAAAATAAACCCTATGATTATTCTGAAAAATACATTGAAAAAGGTTCACTAG TATACTTAGATCCACCATACAGACCAATTTCTAAAACTTCCAGTTTCACAAGCTATTCTGATAATGAATTTAATGATGAA CATCAAATAGAATTAGCACATTATTATGAGAGAATATCCAATAAAGGAGCATATGCTTTGTTAAGTAATAGTGATCCTCA TAATAATGATCCAAATGATGATTTTTTTGATTTATTATATTCTAAATATTGTATTGATAGAATTCCAGCAAAAAGAAGTA TTAATTCAAAAGGAAACAAACGTGGACCAGTAAATGAATTGTTGATAAAAAATTATTGA
Upstream 100 bases:
>100_bases ATTTATGATTCTATTTTTCAATATCAGTTCTGAAGATCTATTTAATAGAAATGGATATTAACTAAAACTATATATTAGTA GGAATAGAAGAGTATGTATT
Downstream 100 bases:
>100_bases GGTTAAACTATGGTTAAATATGAAGTATTAGGTTACACATCACAAGAGGAATATAAGGAAGATTTCTTCAATAATTTATT ACCTACAAATCATAGTTTTA
Product: putative type II restriction-modification system, adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: M.MjaIII; Adenine-specific methyltransferase MjaIII [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MQVTLFNDNIVEGKPFMKWLGGKRQLIPEIEKRLPEHIKISKKIDSYFEPFIGGGALFFYLMSNYHIKKAYISDINKELI LIYNAIKNDDKKVITYLKEMESEFLKLDNDKRKAYYLNVREEFNNQLKTYDFKNYSEETIKRAVKSMFMNKTGFNGLFRL NKKGEFNVPFGRYKNPKICDETNIHNVHKILKNVTIKNKPYDYSEKYIEKGSLVYLDPPYRPISKTSSFTSYSDNEFNDE HQIELAHYYERISNKGAYALLSNSDPHNNDPNDDFFDLLYSKYCIDRIPAKRSINSKGNKRGPVNELLIKNY
Sequences:
>Translated_312_residues MQVTLFNDNIVEGKPFMKWLGGKRQLIPEIEKRLPEHIKISKKIDSYFEPFIGGGALFFYLMSNYHIKKAYISDINKELI LIYNAIKNDDKKVITYLKEMESEFLKLDNDKRKAYYLNVREEFNNQLKTYDFKNYSEETIKRAVKSMFMNKTGFNGLFRL NKKGEFNVPFGRYKNPKICDETNIHNVHKILKNVTIKNKPYDYSEKYIEKGSLVYLDPPYRPISKTSSFTSYSDNEFNDE HQIELAHYYERISNKGAYALLSNSDPHNNDPNDDFFDLLYSKYCIDRIPAKRSINSKGNKRGPVNELLIKNY >Mature_312_residues MQVTLFNDNIVEGKPFMKWLGGKRQLIPEIEKRLPEHIKISKKIDSYFEPFIGGGALFFYLMSNYHIKKAYISDINKELI LIYNAIKNDDKKVITYLKEMESEFLKLDNDKRKAYYLNVREEFNNQLKTYDFKNYSEETIKRAVKSMFMNKTGFNGLFRL NKKGEFNVPFGRYKNPKICDETNIHNVHKILKNVTIKNKPYDYSEKYIEKGSLVYLDPPYRPISKTSSFTSYSDNEFNDE HQIELAHYYERISNKGAYALLSNSDPHNNDPNDDFFDLLYSKYCIDRIPAKRSINSKGNKRGPVNELLIKNY
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MjaIII endonuclease (Potential) [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=295, Percent_Identity=32.8813559322034, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 36835; Mature: 36835
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVTLFNDNIVEGKPFMKWLGGKRQLIPEIEKRLPEHIKISKKIDSYFEPFIGGGALFFY CEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHH LMSNYHIKKAYISDINKELILIYNAIKNDDKKVITYLKEMESEFLKLDNDKRKAYYLNVR HHHCCCCHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH EEFNNQLKTYDFKNYSEETIKRAVKSMFMNKTGFNGLFRLNKKGEFNVPFGRYKNPKICD HHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC ETNIHNVHKILKNVTIKNKPYDYSEKYIEKGSLVYLDPPYRPISKTSSFTSYSDNEFNDE CCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC HQIELAHYYERISNKGAYALLSNSDPHNNDPNDDFFDLLYSKYCIDRIPAKRSINSKGNK HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC RGPVNELLIKNY CCCHHHHHHCCC >Mature Secondary Structure MQVTLFNDNIVEGKPFMKWLGGKRQLIPEIEKRLPEHIKISKKIDSYFEPFIGGGALFFY CEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHH LMSNYHIKKAYISDINKELILIYNAIKNDDKKVITYLKEMESEFLKLDNDKRKAYYLNVR HHHCCCCHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH EEFNNQLKTYDFKNYSEETIKRAVKSMFMNKTGFNGLFRLNKKGEFNVPFGRYKNPKICD HHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC ETNIHNVHKILKNVTIKNKPYDYSEKYIEKGSLVYLDPPYRPISKTSSFTSYSDNEFNDE CCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC HQIELAHYYERISNKGAYALLSNSDPHNNDPNDDFFDLLYSKYCIDRIPAKRSINSKGNK HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC RGPVNELLIKNY CCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]