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The map label for this gene is hmtA2 [H]

Identifier: 84488952

GI number: 84488952

Start: 137857

End: 138063

Strand: Direct

Name: hmtA2 [H]

Synonym: Msp_0122

Alternate gene names: 84488952

Gene position: 137857-138063 (Clockwise)

Preceding gene: 84488951

Following gene: 84488953

Centisome position: 7.8

GC content: 38.65

Gene sequence:

>207_bases
ATGGCTGAGTTACCAATTGCTCCTGTAGGCAGATTATTAAAAAATGCAGGTGCTAGCAGAATAAGTGATGATGCTAAAGA
AGAATTAGCAGAAGTACTCGAAACATTCGGTACATCCATCGCAGAAGATGCAGTAAAACTTGCAAAACATGCAGGTAGAA
AAACTGTTAAAGCATCCGACATTGAGTTAGCATGCAGAGACTTATAA

Upstream 100 bases:

>100_bases
CTAAGGGTATTACTTTAATATCTGTCATATTAAAGGCTAAATATTACCATATATTTAAATACTACTATATTGTAATATAA
TATATATTGGAGGTGAAAAT

Downstream 100 bases:

>100_bases
AAACAACTTGTTTTTATGTTTTATTTTTTCTTTTTTTATAGGAATCTTTATAGGCATTCTTTTGGTCTTCAATTAATTTG
TGTTTACAGGGGACTAACCA

Product: histone

Products: NA

Alternate protein names: Archaeal histone A2 [H]

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MAELPIAPVGRLLKNAGASRISDDAKEELAEVLETFGTSIAEDAVKLAKHAGRKTVKASDIELACRDL

Sequences:

>Translated_68_residues
MAELPIAPVGRLLKNAGASRISDDAKEELAEVLETFGTSIAEDAVKLAKHAGRKTVKASDIELACRDL
>Mature_67_residues
AELPIAPVGRLLKNAGASRISDDAKEELAEVLETFGTSIAEDAVKLAKHAGRKTVKASDIELACRDL

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils [H]

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003958
- InterPro:   IPR009072 [H]

Pfam domain/function: PF00808 CBFD_NFYB_HMF [H]

EC number: NA

Molecular weight: Translated: 7205; Mature: 7074

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELPIAPVGRLLKNAGASRISDDAKEELAEVLETFGTSIAEDAVKLAKHAGRKTVKASD
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCH
IELACRDL
HHHHHCCC
>Mature Secondary Structure 
AELPIAPVGRLLKNAGASRISDDAKEELAEVLETFGTSIAEDAVKLAKHAGRKTVKASD
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCH
IELACRDL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]