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The map label for this gene is cysS

Identifier: 84488953

GI number: 84488953

Start: 138406

End: 139776

Strand: Direct

Name: cysS

Synonym: Msp_0124

Alternate gene names: 84488953

Gene position: 138406-139776 (Clockwise)

Preceding gene: 84488952

Following gene: 84488954

Centisome position: 7.83

GC content: 28.67

Gene sequence:

>1371_bases
ATGATTAAAGTATACAGTACAATGACTCGTCAAAAAGAAGAGTTGAAAGTAACTAACAATAAAATTAAATTATTTGTATG
TGGACCTACAGTGTATGATTACTCACATATTGGTCATGCAAGAACATATATCTCATTTGATGTAATAGTAAGATATCTTA
AACATGAAGGATATTCAGTATTTTATTTACAAAATATTACAGATATTGATGATAAAATTATAAAAAGAGCAAAGGAAAAT
AATGAAGATCCACTAGAATTATCTCATAGATTTGAAAAAGAATACCTTAAAGACATGGAAACATTAAATGTATCTAATGT
AAACTTCTATGCAAGAGCAACAGAACATATGAATGAAATTATTAATCAAATCCAAGATTTAATTGATAAAGGATATGCAT
ATGATACAGAAACTGGAGTTTACTTCGATGTATCTAAATTTGAAGATTTTGGTAAATTATCCAACAGAAATCTTGATGAT
TTACAAAATACAAGAATACAAATAGATTCTACTAAAAAAGATCCAAAAGACTTTGCATTATGGAAAAAACAGGATGAACA
ACCTTACTGGGAATCTCCATGGGGTAATGGAAGACCAGGATGGCATATTGAAGATACTGCAATAACAGAAGCATACTTTG
GTCCTCAATATGATATACATGGAGGAGGATTAGATTTAATATTCCCTCATCATGATGCAGAAATAGCTCAAATGGAAGCA
TCCTCTGGTAAGGAACCATTAGTAGAATACTGGATGCACACTGGATTTTTAAATGTGTCTGGTGAAAAAATGAGTAAATC
CTTGGGAAACTTCATTACTATTAAAGAATTGTTAGAAATAGTTACTCCCGAAGTTTACAGGTTCTTTGTATTATCTACTC
ATTATAGAAGCCCTATTGATTTTAGTGAAGATACATTAAAACAAGCTGAAAATAGTCTTAAAAGAATTCAAAATACTGGT
AAAATCATCATAGATAAATTAACTGAAGATAATTTACCTGAAGGAAAAGTACTTGATGAGGACTTAGAATTATTTAAGGA
AGAATTCTTCAATGCAATGAACAATGATTTCAACACACCTATTGCTTTATCTAATTTATTTGATTTTACCCATAAGATAA
ATAAGGCAATTAGTAGTAATGAAGTATCAAGAAATACTCTAAATAATATAGTTGAAACATTTAAGGATATTGAATCTATA
CTTGGATTTGATATAATAGTTGAGGATGATATGGTTTCTGATGTATCAGGAGATTTATTAAATATTATCACTGAAATTAG
AGAAGATCTTCGTTCTAAAAAGGATTGGGATTTAGCTGATAAAATTAGGGATGAATTGGCAAATCTTGATATTACATTAG
AGGATAAATAA

Upstream 100 bases:

>100_bases
TATTATAAATTCTAATTTTAAATAAAATTTTATAGTTTTAATTATAGATATATGTATTATTATTATAATTTTCTAAATTA
TTTTAGGAGTATTTTATATC

Downstream 100 bases:

>100_bases
TTCTCTTTATTTTTTTTAATAATATTTTATAACATTGTTATTGTAGCGATAATGTAATAACAATATCATATTATTTATTA
AAAAATTTTAAGTATTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MIKVYSTMTRQKEELKVTNNKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKHEGYSVFYLQNITDIDDKIIKRAKEN
NEDPLELSHRFEKEYLKDMETLNVSNVNFYARATEHMNEIINQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDD
LQNTRIQIDSTKKDPKDFALWKKQDEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFPHHDAEIAQMEA
SSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIVTPEVYRFFVLSTHYRSPIDFSEDTLKQAENSLKRIQNTG
KIIIDKLTEDNLPEGKVLDEDLELFKEEFFNAMNNDFNTPIALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESI
LGFDIIVEDDMVSDVSGDLLNIITEIREDLRSKKDWDLADKIRDELANLDITLEDK

Sequences:

>Translated_456_residues
MIKVYSTMTRQKEELKVTNNKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKHEGYSVFYLQNITDIDDKIIKRAKEN
NEDPLELSHRFEKEYLKDMETLNVSNVNFYARATEHMNEIINQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDD
LQNTRIQIDSTKKDPKDFALWKKQDEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFPHHDAEIAQMEA
SSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIVTPEVYRFFVLSTHYRSPIDFSEDTLKQAENSLKRIQNTG
KIIIDKLTEDNLPEGKVLDEDLELFKEEFFNAMNNDFNTPIALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESI
LGFDIIVEDDMVSDVSGDLLNIITEIREDLRSKKDWDLADKIRDELANLDITLEDK
>Mature_456_residues
MIKVYSTMTRQKEELKVTNNKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKHEGYSVFYLQNITDIDDKIIKRAKEN
NEDPLELSHRFEKEYLKDMETLNVSNVNFYARATEHMNEIINQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDD
LQNTRIQIDSTKKDPKDFALWKKQDEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFPHHDAEIAQMEA
SSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIVTPEVYRFFVLSTHYRSPIDFSEDTLKQAENSLKRIQNTG
KIIIDKLTEDNLPEGKVLDEDLELFKEEFFNAMNNDFNTPIALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESI
LGFDIIVEDDMVSDVSGDLLNIITEIREDLRSKKDWDLADKIRDELANLDITLEDK

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=390, Percent_Identity=40.7692307692308, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI303304987, Length=234, Percent_Identity=41.4529914529915, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI21269877, Length=239, Percent_Identity=41.0041841004184, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI10835051, Length=239, Percent_Identity=41.0041841004184, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI62240992, Length=234, Percent_Identity=41.4529914529915, Blast_Score=187, Evalue=2e-47,
Organism=Escherichia coli, GI1786737, Length=407, Percent_Identity=43.980343980344, Blast_Score=346, Evalue=2e-96,
Organism=Caenorhabditis elegans, GI17509797, Length=245, Percent_Identity=41.2244897959184, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17509795, Length=245, Percent_Identity=41.2244897959184, Blast_Score=195, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6324082, Length=438, Percent_Identity=33.5616438356164, Blast_Score=199, Evalue=1e-51,
Organism=Drosophila melanogaster, GI19922218, Length=392, Percent_Identity=40.3061224489796, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI19922364, Length=436, Percent_Identity=31.4220183486239, Blast_Score=187, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 52949; Mature: 52949

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVYSTMTRQKEELKVTNNKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKHEGYSV
CEEEHHHHHHHHHHHEEECCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
FYLQNITDIDDKIIKRAKENNEDPLELSHRFEKEYLKDMETLNVSNVNFYARATEHMNEI
EEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
INQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDDLQNTRIQIDSTKKDPKDFAL
HHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCHHHHH
WKKQDEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFPHHDAEIAQMEA
HCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHH
SSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIVTPEVYRFFVLSTHYRSPID
CCCCHHHHHHHHHCCEEECCHHHHHHHHCCEEEHHHHHHHHCHHHHHHHHHHHCCCCCCC
FSEDTLKQAENSLKRIQNTGKIIIDKLTEDNLPEGKVLDEDLELFKEEFFNAMNNDFNTP
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
IALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESILGFDIIVEDDMVSDVSGDLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCHHHH
NIITEIREDLRSKKDWDLADKIRDELANLDITLEDK
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MIKVYSTMTRQKEELKVTNNKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKHEGYSV
CEEEHHHHHHHHHHHEEECCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
FYLQNITDIDDKIIKRAKENNEDPLELSHRFEKEYLKDMETLNVSNVNFYARATEHMNEI
EEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
INQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDDLQNTRIQIDSTKKDPKDFAL
HHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCHHHHH
WKKQDEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFPHHDAEIAQMEA
HCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHH
SSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIVTPEVYRFFVLSTHYRSPID
CCCCHHHHHHHHHCCEEECCHHHHHHHHCCEEEHHHHHHHHCHHHHHHHHHHHCCCCCCC
FSEDTLKQAENSLKRIQNTGKIIIDKLTEDNLPEGKVLDEDLELFKEEFFNAMNNDFNTP
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
IALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESILGFDIIVEDDMVSDVSGDLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCHHHH
NIITEIREDLRSKKDWDLADKIRDELANLDITLEDK
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA