Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 83721669

GI number: 83721669

Start: 829249

End: 830271

Strand: Reverse

Name: yhhW [C]

Synonym: BTH_I0720

Alternate gene names: 83721669

Gene position: 830271-829249 (Counterclockwise)

Preceding gene: 83719750

Following gene: 83721456

Centisome position: 21.8

GC content: 72.14

Gene sequence:

>1023_bases
TTGCAGGCGGCCCCGCGCACCTCGAACGCGCGCCGCCGCATCCGCCGAGACGCCGTCACTCCGCTACGCCGTTACAATGG
GCCGCACATTCCGTATCCGCCACGCGAACGCGTCGAGCGTTCCGAACCGCCCCCGCCAGCCATGACCGACTCGATCAAAG
CCATCCTGAAGCCGCACGTGCGCGACATCGGCAACCTGACCGTGCGCCGCACGCTGCCCGCGCTCACCGCGCGCACCGTC
GGCCCATTCATCTTCTTCGATCACATGGGCCCCGCCGAGCAGCCGGCGGGCGCGGGCCTCGACGTGCGGGCGCATCCGCA
CATCGGCCTCGCGACCGTCACCTACCTGTTCGACGGCGCGATCCTGCACCGCGACAGCCTCGGCTCGGTGCAGAAGATCG
TGCCGGGCGACGTCAACTGGATGACGGCCGGACGCGGGATCGTCCATTCGGAGCGCACGCCCGACGACGCGCGCGCGCGC
GGGCAGACCGTGCACGGCATCCAGACCTGGGTCGCGCTGCCGCGCGAGCACGAGGCGTGCGAGCCGTCGTTCGAGCACCA
CGCGGCCGCGACGCTGCCGAAGCTCGAGCGCGACGGCGTCGCGCTGACGGTGATCGCGGGCGACGCGTTCGGCGCGCGCT
CGCCCGTCACGACGTTCTCGCGCACGCTGTACGTCGCCGCCGTGTTCGCGGCGGGCGGCACGCTCGCGCTCGACGCCGAT
CACGAAGAACGCGCGGTGTATCTCGTCGACGGCGACCTGACGATCGACGGCATGCCGCTCGAGCTCGCGCAGATGGCGGT
GCTCGCGCCCGGCGCGCGCGCGGCGCTCGCGAGCGCGGGCGGCGCGCGCGCGATGCTGCTCGGCGGCGACAAGCTCGACG
GCGAGCGCTTCATCGAGTGGAATTTCGTCGCGAGCTCGCGCGACGCGATCGAGCGCGCGAAACACGCATGGGCGGCGCAG
CAGATGGGAACGGTACCTGGCGAGACCGACTGGATTCCGTTCCCGGAGCGCCGCGCACATTGA

Upstream 100 bases:

>100_bases
CAGGATCACCACCAGCGCCAGCAACAGGTCTTTCGGGGCCATCGTCGTCTCCTCGGTCTTTTTCGCGCGAATCGCCGAGT
CTACCGGCGTTTCGCGAAGC

Downstream 100 bases:

>100_bases
AAAAACCTCCGCGCACCCTCACTGTGCATTCATCCAACATCGACGAGAACGCCATGGACACCACGCTCGCCACTTTCGAA
CGCGACGTCATCGAAGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MQAAPRTSNARRRIRRDAVTPLRRYNGPHIPYPPRERVERSEPPPPAMTDSIKAILKPHVRDIGNLTVRRTLPALTARTV
GPFIFFDHMGPAEQPAGAGLDVRAHPHIGLATVTYLFDGAILHRDSLGSVQKIVPGDVNWMTAGRGIVHSERTPDDARAR
GQTVHGIQTWVALPREHEACEPSFEHHAAATLPKLERDGVALTVIAGDAFGARSPVTTFSRTLYVAAVFAAGGTLALDAD
HEERAVYLVDGDLTIDGMPLELAQMAVLAPGARAALASAGGARAMLLGGDKLDGERFIEWNFVASSRDAIERAKHAWAAQ
QMGTVPGETDWIPFPERRAH

Sequences:

>Translated_340_residues
MQAAPRTSNARRRIRRDAVTPLRRYNGPHIPYPPRERVERSEPPPPAMTDSIKAILKPHVRDIGNLTVRRTLPALTARTV
GPFIFFDHMGPAEQPAGAGLDVRAHPHIGLATVTYLFDGAILHRDSLGSVQKIVPGDVNWMTAGRGIVHSERTPDDARAR
GQTVHGIQTWVALPREHEACEPSFEHHAAATLPKLERDGVALTVIAGDAFGARSPVTTFSRTLYVAAVFAAGGTLALDAD
HEERAVYLVDGDLTIDGMPLELAQMAVLAPGARAALASAGGARAMLLGGDKLDGERFIEWNFVASSRDAIERAKHAWAAQ
QMGTVPGETDWIPFPERRAH
>Mature_340_residues
MQAAPRTSNARRRIRRDAVTPLRRYNGPHIPYPPRERVERSEPPPPAMTDSIKAILKPHVRDIGNLTVRRTLPALTARTV
GPFIFFDHMGPAEQPAGAGLDVRAHPHIGLATVTYLFDGAILHRDSLGSVQKIVPGDVNWMTAGRGIVHSERTPDDARAR
GQTVHGIQTWVALPREHEACEPSFEHHAAATLPKLERDGVALTVIAGDAFGARSPVTTFSRTLYVAAVFAAGGTLALDAD
HEERAVYLVDGDLTIDGMPLELAQMAVLAPGARAALASAGGARAMLLGGDKLDGERFIEWNFVASSRDAIERAKHAWAAQ
QMGTVPGETDWIPFPERRAH

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=260, Percent_Identity=30.7692307692308, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI4505823, Length=260, Percent_Identity=30.7692307692308, Blast_Score=113, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 36849; Mature: 36849

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAPRTSNARRRIRRDAVTPLRRYNGPHIPYPPRERVERSEPPPPAMTDSIKAILKPHV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH
RDIGNLTVRRTLPALTARTVGPFIFFDHMGPAEQPAGAGLDVRAHPHIGLATVTYLFDGA
HHHHCEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCH
ILHRDSLGSVQKIVPGDVNWMTAGRGIVHSERTPDDARARGQTVHGIQTWVALPREHEAC
HEECCCCCCHHHHCCCCCCEEECCCCEEECCCCCHHHHHCCCCHHHHHHHHHCCCCCCCC
EPSFEHHAAATLPKLERDGVALTVIAGDAFGARSPVTTFSRTLYVAAVFAAGGTLALDAD
CCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
HEERAVYLVDGDLTIDGMPLELAQMAVLAPGARAALASAGGARAMLLGGDKLDGERFIEW
CCCCEEEEEECCEEECCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEE
NFVASSRDAIERAKHAWAAQQMGTVPGETDWIPFPERRAH
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MQAAPRTSNARRRIRRDAVTPLRRYNGPHIPYPPRERVERSEPPPPAMTDSIKAILKPHV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH
RDIGNLTVRRTLPALTARTVGPFIFFDHMGPAEQPAGAGLDVRAHPHIGLATVTYLFDGA
HHHHCEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCH
ILHRDSLGSVQKIVPGDVNWMTAGRGIVHSERTPDDARARGQTVHGIQTWVALPREHEAC
HEECCCCCCHHHHCCCCCCEEECCCCEEECCCCCHHHHHCCCCHHHHHHHHHCCCCCCCC
EPSFEHHAAATLPKLERDGVALTVIAGDAFGARSPVTTFSRTLYVAAVFAAGGTLALDAD
CCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECC
HEERAVYLVDGDLTIDGMPLELAQMAVLAPGARAALASAGGARAMLLGGDKLDGERFIEW
CCCCEEEEEECCEEECCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEE
NFVASSRDAIERAKHAWAAQQMGTVPGETDWIPFPERRAH
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]