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The map label for this gene is ybbN [H]

Identifier: 83721456

GI number: 83721456

Start: 828347

End: 829195

Strand: Reverse

Name: ybbN [H]

Synonym: BTH_I0719

Alternate gene names: 83721456

Gene position: 829195-828347 (Counterclockwise)

Preceding gene: 83721669

Following gene: 284159415

Centisome position: 21.77

GC content: 69.96

Gene sequence:

>849_bases
ATGGACACCACGCTCGCCACTTTCGAACGCGACGTCATCGAAGCATCGCTTGCCGCCCCCGTGCTGGTCGACTTCTGGGC
GCCCTGGTGCGGCCCGTGCAAGACGCTCGGCCCGCTGCTCGAGAAGCTCGAGCAGGCGTACGAGGGCCGCTGGAAGCTCG
TGAAGGTCAATGTCGACGAGAATCAGGAGCTCGCCGCGCACTTCCAGACCCGCAGCATTCCGCATGTGATCGCATTCGCG
GGCGGACAGCCGGTCGACCAGTTCGTCGGCGTGCTGCCCGAAGGGCAGCTGCGTGCGTTCCTCGACCGCCTCGTGCCCAC
GCCCGACGAAGCCGAGCGGCAGGCCGCGCAGGCCGCGCTCGCCGAAGAGCGGATCGACGACGCGCTGTCGCACCTCGAAA
ACGCGCTCGCGCTGAACCCCGGCTACGACGAAGCGCGCCTCGATCTCGTCGAGTTGCTGCTCGCGCTGAACCGGATCGAC
GACGCCCGCGCGGAGGCCGCGCGCCTGTCGCCGCAGACGACGGGCGGCGCCGACGCGCGCTATCAGGCGATCAAGACGCG
CTTCGACGCGCTCGATGCGACCGCCGACCTGCCGCCGACCGATGCGCTCGAAGCGCGGATCGCGAGCGACCCCGCCGATC
TCGACGCGCGCTTCGATCTGGCGCAGAGCCTGATCGCGCGACGCGCGTACGATGGCGCGCTCGAGCAGTTGCTGGAGATC
GTCCGGCGCGACCGGACGTTCGGCGACGACGTCGGCCGCAAGACGATGATTTCGGTGTTCGAGCTCGCGGCGGACCAGCC
CGAGCTCGTGTCCGCGTGGCGGCGCAAGCTGAGCGCGGCGCTGAACTGA

Upstream 100 bases:

>100_bases
CTGGCGAGACCGACTGGATTCCGTTCCCGGAGCGCCGCGCACATTGAAAAAACCTCCGCGCACCCTCACTGTGCATTCAT
CCAACATCGACGAGAACGCC

Downstream 100 bases:

>100_bases
CGAACCGATAATCCGACAATCCGACGAACCGACGACGACAGGCTTAGGCCGGAGCGGCCATGCGGCGGGTGCGCGTGATG
CGCGTCCGCCGCTTTTTTCT

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MDTTLATFERDVIEASLAAPVLVDFWAPWCGPCKTLGPLLEKLEQAYEGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
GGQPVDQFVGVLPEGQLRAFLDRLVPTPDEAERQAAQAALAEERIDDALSHLENALALNPGYDEARLDLVELLLALNRID
DARAEAARLSPQTTGGADARYQAIKTRFDALDATADLPPTDALEARIASDPADLDARFDLAQSLIARRAYDGALEQLLEI
VRRDRTFGDDVGRKTMISVFELAADQPELVSAWRRKLSAALN

Sequences:

>Translated_282_residues
MDTTLATFERDVIEASLAAPVLVDFWAPWCGPCKTLGPLLEKLEQAYEGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
GGQPVDQFVGVLPEGQLRAFLDRLVPTPDEAERQAAQAALAEERIDDALSHLENALALNPGYDEARLDLVELLLALNRID
DARAEAARLSPQTTGGADARYQAIKTRFDALDATADLPPTDALEARIASDPADLDARFDLAQSLIARRAYDGALEQLLEI
VRRDRTFGDDVGRKTMISVFELAADQPELVSAWRRKLSAALN
>Mature_282_residues
MDTTLATFERDVIEASLAAPVLVDFWAPWCGPCKTLGPLLEKLEQAYEGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
GGQPVDQFVGVLPEGQLRAFLDRLVPTPDEAERQAAQAALAEERIDDALSHLENALALNPGYDEARLDLVELLLALNRID
DARAEAARLSPQTTGGADARYQAIKTRFDALDATADLPPTDALEARIASDPADLDARFDLAQSLIARRAYDGALEQLLEI
VRRDRTFGDDVGRKTMISVFELAADQPELVSAWRRKLSAALN

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI21361403, Length=87, Percent_Identity=45.9770114942529, Blast_Score=91, Evalue=9e-19,
Organism=Escherichia coli, GI87081747, Length=272, Percent_Identity=36.0294117647059, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI87082331, Length=96, Percent_Identity=41.6666666666667, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788936, Length=83, Percent_Identity=42.1686746987952, Blast_Score=90, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI212646193, Length=95, Percent_Identity=43.1578947368421, Blast_Score=84, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6321648, Length=73, Percent_Identity=39.7260273972603, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28573567, Length=105, Percent_Identity=40, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24639826, Length=70, Percent_Identity=42.8571428571429, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24664269, Length=85, Percent_Identity=38.8235294117647, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24639068, Length=96, Percent_Identity=36.4583333333333, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21358065, Length=82, Percent_Identity=39.0243902439024, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31010; Mature: 31010

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTLATFERDVIEASLAAPVLVDFWAPWCGPCKTLGPLLEKLEQAYEGRWKLVKVNVDE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
NQELAAHFQTRSIPHVIAFAGGQPVDQFVGVLPEGQLRAFLDRLVPTPDEAERQAAQAAL
CHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
AEERIDDALSHLENALALNPGYDEARLDLVELLLALNRIDDARAEAARLSPQTTGGADAR
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
YQAIKTRFDALDATADLPPTDALEARIASDPADLDARFDLAQSLIARRAYDGALEQLLEI
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRDRTFGDDVGRKTMISVFELAADQPELVSAWRRKLSAALN
HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTTLATFERDVIEASLAAPVLVDFWAPWCGPCKTLGPLLEKLEQAYEGRWKLVKVNVDE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
NQELAAHFQTRSIPHVIAFAGGQPVDQFVGVLPEGQLRAFLDRLVPTPDEAERQAAQAAL
CHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
AEERIDDALSHLENALALNPGYDEARLDLVELLLALNRIDDARAEAARLSPQTTGGADAR
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
YQAIKTRFDALDATADLPPTDALEARIASDPADLDARFDLAQSLIARRAYDGALEQLLEI
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRDRTFGDDVGRKTMISVFELAADQPELVSAWRRKLSAALN
HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]