| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is gudP [H]
Identifier: 83721570
GI number: 83721570
Start: 217652
End: 219007
Strand: Direct
Name: gudP [H]
Synonym: BTH_I0187
Alternate gene names: 83721570
Gene position: 217652-219007 (Clockwise)
Preceding gene: 83720460
Following gene: 83720349
Centisome position: 5.71
GC content: 65.71
Gene sequence:
>1356_bases ATGGACATCAAGGCTCCCGCCGTGGGTGCGCGCAGCACGCCGCGCGTGGAGCGCATGAGCCGCGTGCGCTTCACGATTCT CGCGATGCTGTTCGTCGTGACGACGATCAACTACGCGGACCGCGCGACGATCTCGATCGCCGGCTCGGCGATGCAAAAGG ACCTCGGCATCGACGCGGTATCGCTCGGCTACATCTTCTCCGCGTTCGGCTGGGCGTATGTGATCGCGCAGATTCCGGGC GGATGGCTTCTCGATCGTTTCGGGTCACGACGCGTTTATGCGGCGAGCATCCTGACGTGGTCGGTCTTCACGCTCGCGCA AGGCGCGATCGGCCTGTTCACCGGCATGGCCGCGATCGTGGCGGTGTTCTCGCTGCGCTTTCTCGTCGGCATCGCGGAAG CGCCTTCGTTTCCGGCGAACAGCCGGATCGTCGCCGCGTGGTTTCCGGCGAACGAGCGCGGCACGGCTTCCGCGATCTTC AACTCCGCGCAATACGCGGCGACGGTGATCTTCGCGCCGCTGATGGCGTGGCTCGTGCATCGCTTCGGCTGGCACGAAGT GTTCGTCGTGATGGGGGCGATCGGCATCGCGGCGGCGTTCGCGTGGCGCGCCGTCGTACGCGATCCGAAGGATCATCCGC GCATGAACCGCGCGGAGATCGAGTACATCGAGAACGGCGGCGGCCTCGTCAACATGGATCGCGCGGGCGTCGCGAACGCG CAGGGCCCCGACCTCGGCTACATCGGGCAGTTGCTGAAGAACCGGATGATGATGGGCGTCTACGTCGCGCAATACTGCAT CAACGCGCTCACGTACTTCTTCATCACGTGGTTCCCGGTGTACCTCGTGCAGGCGCGCGGGATGTCGATCCTGAAGGCGG GCTTCGTCGCGTCGGTGCCCGCCGTGTGCGGCTTCCTCGGCGGCATTCTGGGCGGCATCGTCTCCGATGCGCTGCTGCGC CGCGGCGCGTCGCTGTCGGTTGCACGCAAGGTGCCGATCGTGCTCGGCATGCTGCTGTCGGTCAGCATGGTGGTGTGCAA TTACGTCGACACGCAGGGCATCGTCGTCGCGGTCATGGCGCTCGCGTTCTTTGGCAAGGGCATGGGCGCGCTCGGCTGGG CGGTCAATTCGGATACCGCGCCGAAGCAGATCGCGGGCCTGTCGGGGGCATTGATGAACACGTTCGGCAACCTGTCGAGC ATCACCACGCCGATCGCGATCGGCTACATCGTCAACCGGACCGGCTCGTTCAACGGCGCGCTGGCCTACGTGGGGCTTCA TGCGCTCGTCGCGTGCGTCTGCTACCTGTTCGTGGTCGGCGAGATCAAGCGCGTCGAGCTGAAGCCGGCATCGTGA
Upstream 100 bases:
>100_bases GGTCTGATCGCGATGGTCTCGCGAAGCCGGGCCGCAGCGGGCCCGGCGCCGAAAGCTGAAACGACCGGCGCATAATGGAT GCCGGCGGAAGGAGGAGACA
Downstream 100 bases:
>100_bases AGCGAGGCATGTCGAACATGACGTCGAATGCGATCGAAGCCGCCGCGCAAGCGCACGCGAACACGCACACGCCGAGCCCG AGCGTCGCGCAACGGTGCGA
Product: major facilitator superfamily transporter phthalate permease
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MDIKAPAVGARSTPRVERMSRVRFTILAMLFVVTTINYADRATISIAGSAMQKDLGIDAVSLGYIFSAFGWAYVIAQIPG GWLLDRFGSRRVYAASILTWSVFTLAQGAIGLFTGMAAIVAVFSLRFLVGIAEAPSFPANSRIVAAWFPANERGTASAIF NSAQYAATVIFAPLMAWLVHRFGWHEVFVVMGAIGIAAAFAWRAVVRDPKDHPRMNRAEIEYIENGGGLVNMDRAGVANA QGPDLGYIGQLLKNRMMMGVYVAQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFLGGILGGIVSDALLR RGASLSVARKVPIVLGMLLSVSMVVCNYVDTQGIVVAVMALAFFGKGMGALGWAVNSDTAPKQIAGLSGALMNTFGNLSS ITTPIAIGYIVNRTGSFNGALAYVGLHALVACVCYLFVVGEIKRVELKPAS
Sequences:
>Translated_451_residues MDIKAPAVGARSTPRVERMSRVRFTILAMLFVVTTINYADRATISIAGSAMQKDLGIDAVSLGYIFSAFGWAYVIAQIPG GWLLDRFGSRRVYAASILTWSVFTLAQGAIGLFTGMAAIVAVFSLRFLVGIAEAPSFPANSRIVAAWFPANERGTASAIF NSAQYAATVIFAPLMAWLVHRFGWHEVFVVMGAIGIAAAFAWRAVVRDPKDHPRMNRAEIEYIENGGGLVNMDRAGVANA QGPDLGYIGQLLKNRMMMGVYVAQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFLGGILGGIVSDALLR RGASLSVARKVPIVLGMLLSVSMVVCNYVDTQGIVVAVMALAFFGKGMGALGWAVNSDTAPKQIAGLSGALMNTFGNLSS ITTPIAIGYIVNRTGSFNGALAYVGLHALVACVCYLFVVGEIKRVELKPAS >Mature_451_residues MDIKAPAVGARSTPRVERMSRVRFTILAMLFVVTTINYADRATISIAGSAMQKDLGIDAVSLGYIFSAFGWAYVIAQIPG GWLLDRFGSRRVYAASILTWSVFTLAQGAIGLFTGMAAIVAVFSLRFLVGIAEAPSFPANSRIVAAWFPANERGTASAIF NSAQYAATVIFAPLMAWLVHRFGWHEVFVVMGAIGIAAAFAWRAVVRDPKDHPRMNRAEIEYIENGGGLVNMDRAGVANA QGPDLGYIGQLLKNRMMMGVYVAQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFLGGILGGIVSDALLR RGASLSVARKVPIVLGMLLSVSMVVCNYVDTQGIVVAVMALAFFGKGMGALGWAVNSDTAPKQIAGLSGALMNTFGNLSS ITTPIAIGYIVNRTGSFNGALAYVGLHALVACVCYLFVVGEIKRVELKPAS
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI9966811, Length=386, Percent_Identity=29.0155440414508, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI9945322, Length=358, Percent_Identity=28.2122905027933, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI6912666, Length=376, Percent_Identity=27.3936170212766, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI21322234, Length=389, Percent_Identity=25.706940874036, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI148743791, Length=360, Percent_Identity=24.1666666666667, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI4885441, Length=367, Percent_Identity=26.7029972752044, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI223718438, Length=202, Percent_Identity=28.7128712871287, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI154350196, Length=421, Percent_Identity=22.3277909738717, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI148728191, Length=301, Percent_Identity=23.5880398671096, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI256219598, Length=395, Percent_Identity=23.0379746835443, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4503847, Length=395, Percent_Identity=23.0379746835443, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI256219483, Length=395, Percent_Identity=23.0379746835443, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI5031955, Length=287, Percent_Identity=24.7386759581882, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI256219543, Length=314, Percent_Identity=23.2484076433121, Blast_Score=72, Evalue=9e-13, Organism=Escherichia coli, GI1789152, Length=445, Percent_Identity=65.6179775280899, Blast_Score=612, Evalue=1e-176, Organism=Escherichia coli, GI1789515, Length=430, Percent_Identity=58.6046511627907, Blast_Score=546, Evalue=1e-156, Organism=Escherichia coli, GI87082320, Length=428, Percent_Identity=40.1869158878505, Blast_Score=350, Evalue=1e-97, Organism=Escherichia coli, GI2367379, Length=442, Percent_Identity=28.5067873303167, Blast_Score=184, Evalue=7e-48, Organism=Escherichia coli, GI2367193, Length=338, Percent_Identity=27.2189349112426, Blast_Score=132, Evalue=6e-32, Organism=Escherichia coli, GI1788573, Length=466, Percent_Identity=22.9613733905579, Blast_Score=75, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115533556, Length=396, Percent_Identity=27.7777777777778, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI115533554, Length=396, Percent_Identity=27.7777777777778, Blast_Score=118, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17552542, Length=448, Percent_Identity=24.1071428571429, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560030, Length=355, Percent_Identity=23.3802816901408, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17535049, Length=413, Percent_Identity=22.2760290556901, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI32565914, Length=264, Percent_Identity=24.2424242424242, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25151055, Length=240, Percent_Identity=23.75, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32565916, Length=264, Percent_Identity=24.2424242424242, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193205400, Length=316, Percent_Identity=21.2025316455696, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25141318, Length=394, Percent_Identity=22.0812182741117, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25141316, Length=394, Percent_Identity=22.0812182741117, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17570335, Length=244, Percent_Identity=25, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17554148, Length=346, Percent_Identity=22.8323699421965, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI25141341, Length=332, Percent_Identity=22.289156626506, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71997452, Length=353, Percent_Identity=23.7960339943343, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI86561091, Length=276, Percent_Identity=24.2753623188406, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17569727, Length=415, Percent_Identity=22.6506024096386, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24639764, Length=436, Percent_Identity=25.6880733944954, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24641682, Length=377, Percent_Identity=27.5862068965517, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583789, Length=414, Percent_Identity=26.3285024154589, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24648416, Length=472, Percent_Identity=25, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI21356189, Length=472, Percent_Identity=25, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI19922400, Length=452, Percent_Identity=25, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI62484226, Length=444, Percent_Identity=25.9009009009009, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24654215, Length=437, Percent_Identity=24.9427917620137, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI45550460, Length=410, Percent_Identity=24.6341463414634, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI28573299, Length=407, Percent_Identity=24.8157248157248, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24655255, Length=370, Percent_Identity=24.8648648648649, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI20130167, Length=454, Percent_Identity=25.3303964757709, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24584153, Length=350, Percent_Identity=24.2857142857143, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI20130135, Length=413, Percent_Identity=23.4866828087167, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24655271, Length=413, Percent_Identity=23.4866828087167, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24580790, Length=355, Percent_Identity=25.3521126760563, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI20129235, Length=371, Percent_Identity=25.0673854447439, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI28573708, Length=436, Percent_Identity=23.6238532110092, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573707, Length=436, Percent_Identity=23.6238532110092, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24658658, Length=402, Percent_Identity=23.6318407960199, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24653727, Length=315, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI221474708, Length=192, Percent_Identity=32.2916666666667, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24658666, Length=412, Percent_Identity=22.5728155339806, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24658674, Length=382, Percent_Identity=23.0366492146597, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI281361682, Length=357, Percent_Identity=22.6890756302521, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI19920686, Length=390, Percent_Identity=23.5897435897436, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48106; Mature: 48106
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKAPAVGARSTPRVERMSRVRFTILAMLFVVTTINYADRATISIAGSAMQKDLGIDAV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHH SLGYIFSAFGWAYVIAQIPGGWLLDRFGSRRVYAASILTWSVFTLAQGAIGLFTGMAAIV HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AVFSLRFLVGIAEAPSFPANSRIVAAWFPANERGTASAIFNSAQYAATVIFAPLMAWLVH HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RFGWHEVFVVMGAIGIAAAFAWRAVVRDPKDHPRMNRAEIEYIENGGGLVNMDRAGVANA HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCEEEECCCCCCCC QGPDLGYIGQLLKNRMMMGVYVAQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AVCGFLGGILGGIVSDALLRRGASLSVARKVPIVLGMLLSVSMVVCNYVDTQGIVVAVMA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LAFFGKGMGALGWAVNSDTAPKQIAGLSGALMNTFGNLSSITTPIAIGYIVNRTGSFNGA HHHHCCCCCHHCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCH LAYVGLHALVACVCYLFVVGEIKRVELKPAS HHHHHHHHHHHHHHHHHHHCCHHEEEECCCC >Mature Secondary Structure MDIKAPAVGARSTPRVERMSRVRFTILAMLFVVTTINYADRATISIAGSAMQKDLGIDAV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHH SLGYIFSAFGWAYVIAQIPGGWLLDRFGSRRVYAASILTWSVFTLAQGAIGLFTGMAAIV HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AVFSLRFLVGIAEAPSFPANSRIVAAWFPANERGTASAIFNSAQYAATVIFAPLMAWLVH HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RFGWHEVFVVMGAIGIAAAFAWRAVVRDPKDHPRMNRAEIEYIENGGGLVNMDRAGVANA HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCEEEECCCCCCCC QGPDLGYIGQLLKNRMMMGVYVAQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AVCGFLGGILGGIVSDALLRRGASLSVARKVPIVLGMLLSVSMVVCNYVDTQGIVVAVMA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LAFFGKGMGALGWAVNSDTAPKQIAGLSGALMNTFGNLSSITTPIAIGYIVNRTGSFNGA HHHHCCCCCHHCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCH LAYVGLHALVACVCYLFVVGEIKRVELKPAS HHHHHHHHHHHHHHHHHHHCCHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 9772162; 10762278 [H]