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The map label for this gene is tcp [H]

Identifier: 83721567

GI number: 83721567

Start: 2015851

End: 2017773

Strand: Direct

Name: tcp [H]

Synonym: BTH_I1799

Alternate gene names: 83721567

Gene position: 2015851-2017773 (Clockwise)

Preceding gene: 83718494

Following gene: 83720202

Centisome position: 52.92

GC content: 68.49

Gene sequence:

>1923_bases
ATGAGCAAGCAACTGTTTGGACCTGGAATGCGCCTGATGGCGCGCATGAAGCTGCCCAGGAAGCTCGCGATTCTCGCCGT
GCTGTTCATCGTGCCGCTCGTCGCCGCGCTCTATGCGACGCTTGCCGTCGCACTGCACGCCTATGCGACGACGCAGGGCG
AGCGCGACGGCATCACGATCCTCGAAACGACGCAGGATCTATTGAAGGCGGTGCAGGTGCGGCGCGGCGCGGGCGCTTCG
GTGCTCGCGGGCAACGAGGCGATGCGCGCGAAGTTCGACGCGGCGAACGCGAGCGCCGATCGTCTCGTCGCGACGCTCAA
GCAGCAAGTGCGCGACACCCGGCGGTTCGACGTCGTTGCGCTCGTCGAAGCGCTCGCGAGCCAGTACGAAAAGGCGGCGG
CGGGCGGGCTCGGCACATCCGCCGCCGCGCTGTTCGATTCGCACACCGACGTGATCCACTCGATCTTCCTGTTCGAGAAG
GACCTGGCGGTTGCGTCGCAGCTCGGCGTCGATCCGGACGCGTCGAACTATCACCTGATCGACTCGGTGCTGTTCGCGCT
GCCGGGTACGGCCGAAACGGTCGGCGTGCTGCGCGGCAAGGGATCGGCCGCGCTGAGCGGCGGCTCGCTCGGCGACGCCG
ACAAGCGCGAGCTCGCGGTGCGCGCGGGCGGCCTCGCCGAGCAGATGAGCGTGATTCGCCATCATCTCGAACGCACGAAG
GACACGCTCGGCGCAAACGCGCTGGATGGCGTCGATCTTGGTGCGGTTGCGGCGTTTCAACGCACGGCGGCAGCGCTCGC
GCACGGCGGCGCGCCGGTTGACGCGAAGACCTATTTCCAGCAGGGGAGCGATGCGATCGACGCGCTGTATCGCGTGCACG
GCGCGCTCGCGCAGCAACTGCGCGAGCGCCTCGCGGCGCGCGCGCACGCCGAGCAGGTGAAGGTGGCGGCGATCCTGGCA
TTGAGCGTCGCGCTCGTGGCGTGCGCGCTCTATCTTTTCGTCGCTTTCGCGATGTCGACGCACGAGGATGTCGCGCAGTT
GTCCGGCTGCATGCGCGCGGTGGGCGACGGCGATCTGCGCGCGCGCCTCGCGGTGCGCGGCGGCGACGAATTCGCTTTCA
TCAAGCGCGGCTTCAACGCGCTGCTCGACGTATGGGCGCAGACGCTGTCCGAGACGCGGCGCGTGGCCGATTCGGTGATG
GTCGGCAGCCAGCAGATCGCGGCCGGCAATCTCGATTTGTCGGGGCGCACCGAGACGCAGGCCGCATCGCTCGAGCAAAC
GGCGGCCAGCATGGAAGAGCTGACGTCGACCGTGCGCCACAACGCGTCGAACGCATCGCACGCGAGCACGCTGAGCGCCG
AGGCGTCCGAGCGCGCGGCGGACACCGGGCGGATCATGACGCACGCGGTGACGCTGATGACGAAGATCCACGACAGCTCG
AACCGGATGGCGGAGATCGTGTCGGTGATCGAAGGCATCGCGTTCCAGACCAACATCCTCGCGCTGAACGCGGCCGTCGA
GGCGGCCCGCGCGGGCGAGCAGGGCAAGGGCTTCGCGGTGGTCGCGGGCGAGGTGCGCGCGCTCGCGCACCGCAGCGCCG
CCGCCGCGAAGGACGTGAAGGAGCTGATTCACGAATCGATTCGCCACGTGACCGACGGCTCGTTGCTGTTCCAGCGCGCG
GACGACGCGATCCGCAGCGTGAATGCGTCGATCCGGAGCGTCGACACCGTCGTCAGCGAAATCGCGAAGGCGTCCGAGCA
GCAAAGCGACGGGATCGAGCAGGTCAACGCGGCGATCACGCAGATGGACGAAGTGACGCAGCGCAACGCGGCGCTCGTCG
AGGAATCGGCGGCCGCGAGCGCGTCGCTGCGCGAACAGGCCGAGCACATGGGAAAGCTTGTCGGGCGCTTCGTGCTCGCG
TAG

Upstream 100 bases:

>100_bases
CGTGGACTGGTGATTGATCTCGCTTAAGTATCGGGCCGAACGATCCGTATACGGAAACGAGGCCGAAGCGGTCGTCTTAT
CACATCGAAAAGGGGCAAGA

Downstream 100 bases:

>100_bases
CGGGCACATAGCCCTTCAGCGTATACGCAGGCCGCCCGCTCGGCGGCATGCGTGCAATGTCGGAGGTTGATTTGCATCAA
GTCCGCCCGAGCCGCGCGAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MSKQLFGPGMRLMARMKLPRKLAILAVLFIVPLVAALYATLAVALHAYATTQGERDGITILETTQDLLKAVQVRRGAGAS
VLAGNEAMRAKFDAANASADRLVATLKQQVRDTRRFDVVALVEALASQYEKAAAGGLGTSAAALFDSHTDVIHSIFLFEK
DLAVASQLGVDPDASNYHLIDSVLFALPGTAETVGVLRGKGSAALSGGSLGDADKRELAVRAGGLAEQMSVIRHHLERTK
DTLGANALDGVDLGAVAAFQRTAAALAHGGAPVDAKTYFQQGSDAIDALYRVHGALAQQLRERLAARAHAEQVKVAAILA
LSVALVACALYLFVAFAMSTHEDVAQLSGCMRAVGDGDLRARLAVRGGDEFAFIKRGFNALLDVWAQTLSETRRVADSVM
VGSQQIAAGNLDLSGRTETQAASLEQTAASMEELTSTVRHNASNASHASTLSAEASERAADTGRIMTHAVTLMTKIHDSS
NRMAEIVSVIEGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRALAHRSAAAAKDVKELIHESIRHVTDGSLLFQRA
DDAIRSVNASIRSVDTVVSEIAKASEQQSDGIEQVNAAITQMDEVTQRNAALVEESAAASASLREQAEHMGKLVGRFVLA

Sequences:

>Translated_640_residues
MSKQLFGPGMRLMARMKLPRKLAILAVLFIVPLVAALYATLAVALHAYATTQGERDGITILETTQDLLKAVQVRRGAGAS
VLAGNEAMRAKFDAANASADRLVATLKQQVRDTRRFDVVALVEALASQYEKAAAGGLGTSAAALFDSHTDVIHSIFLFEK
DLAVASQLGVDPDASNYHLIDSVLFALPGTAETVGVLRGKGSAALSGGSLGDADKRELAVRAGGLAEQMSVIRHHLERTK
DTLGANALDGVDLGAVAAFQRTAAALAHGGAPVDAKTYFQQGSDAIDALYRVHGALAQQLRERLAARAHAEQVKVAAILA
LSVALVACALYLFVAFAMSTHEDVAQLSGCMRAVGDGDLRARLAVRGGDEFAFIKRGFNALLDVWAQTLSETRRVADSVM
VGSQQIAAGNLDLSGRTETQAASLEQTAASMEELTSTVRHNASNASHASTLSAEASERAADTGRIMTHAVTLMTKIHDSS
NRMAEIVSVIEGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRALAHRSAAAAKDVKELIHESIRHVTDGSLLFQRA
DDAIRSVNASIRSVDTVVSEIAKASEQQSDGIEQVNAAITQMDEVTQRNAALVEESAAASASLREQAEHMGKLVGRFVLA
>Mature_639_residues
SKQLFGPGMRLMARMKLPRKLAILAVLFIVPLVAALYATLAVALHAYATTQGERDGITILETTQDLLKAVQVRRGAGASV
LAGNEAMRAKFDAANASADRLVATLKQQVRDTRRFDVVALVEALASQYEKAAAGGLGTSAAALFDSHTDVIHSIFLFEKD
LAVASQLGVDPDASNYHLIDSVLFALPGTAETVGVLRGKGSAALSGGSLGDADKRELAVRAGGLAEQMSVIRHHLERTKD
TLGANALDGVDLGAVAAFQRTAAALAHGGAPVDAKTYFQQGSDAIDALYRVHGALAQQLRERLAARAHAEQVKVAAILAL
SVALVACALYLFVAFAMSTHEDVAQLSGCMRAVGDGDLRARLAVRGGDEFAFIKRGFNALLDVWAQTLSETRRVADSVMV
GSQQIAAGNLDLSGRTETQAASLEQTAASMEELTSTVRHNASNASHASTLSAEASERAADTGRIMTHAVTLMTKIHDSSN
RMAEIVSVIEGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRALAHRSAAAAKDVKELIHESIRHVTDGSLLFQRAD
DAIRSVNASIRSVDTVVSEIAKASEQQSDGIEQVNAAITQMDEVTQRNAALVEESAAASASLREQAEHMGKLVGRFVLA

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=332, Percent_Identity=46.3855421686747, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI1787690, Length=286, Percent_Identity=49.6503496503497, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=48.8215488215488, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI2367378, Length=296, Percent_Identity=45.945945945946, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI1789453, Length=311, Percent_Identity=36.9774919614148, Blast_Score=180, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67325; Mature: 67194

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQLFGPGMRLMARMKLPRKLAILAVLFIVPLVAALYATLAVALHAYATTQGERDGITI
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LETTQDLLKAVQVRRGAGASVLAGNEAMRAKFDAANASADRLVATLKQQVRDTRRFDVVA
EHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVEALASQYEKAAAGGLGTSAAALFDSHTDVIHSIFLFEKDLAVASQLGVDPDASNYHLI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
DSVLFALPGTAETVGVLRGKGSAALSGGSLGDADKRELAVRAGGLAEQMSVIRHHLERTK
HHHHHHCCCCHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
DTLGANALDGVDLGAVAAFQRTAAALAHGGAPVDAKTYFQQGSDAIDALYRVHGALAQQL
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
RERLAARAHAEQVKVAAILALSVALVACALYLFVAFAMSTHEDVAQLSGCMRAVGDGDLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ARLAVRGGDEFAFIKRGFNALLDVWAQTLSETRRVADSVMVGSQQIAAGNLDLSGRTETQ
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHH
AASLEQTAASMEELTSTVRHNASNASHASTLSAEASERAADTGRIMTHAVTLMTKIHDSS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NRMAEIVSVIEGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRALAHRSAAAAKDVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ELIHESIRHVTDGSLLFQRADDAIRSVNASIRSVDTVVSEIAKASEQQSDGIEQVNAAIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QMDEVTQRNAALVEESAAASASLREQAEHMGKLVGRFVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKQLFGPGMRLMARMKLPRKLAILAVLFIVPLVAALYATLAVALHAYATTQGERDGITI
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LETTQDLLKAVQVRRGAGASVLAGNEAMRAKFDAANASADRLVATLKQQVRDTRRFDVVA
EHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVEALASQYEKAAAGGLGTSAAALFDSHTDVIHSIFLFEKDLAVASQLGVDPDASNYHLI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
DSVLFALPGTAETVGVLRGKGSAALSGGSLGDADKRELAVRAGGLAEQMSVIRHHLERTK
HHHHHHCCCCHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
DTLGANALDGVDLGAVAAFQRTAAALAHGGAPVDAKTYFQQGSDAIDALYRVHGALAQQL
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
RERLAARAHAEQVKVAAILALSVALVACALYLFVAFAMSTHEDVAQLSGCMRAVGDGDLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ARLAVRGGDEFAFIKRGFNALLDVWAQTLSETRRVADSVMVGSQQIAAGNLDLSGRTETQ
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHH
AASLEQTAASMEELTSTVRHNASNASHASTLSAEASERAADTGRIMTHAVTLMTKIHDSS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NRMAEIVSVIEGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRALAHRSAAAAKDVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ELIHESIRHVTDGSLLFQRADDAIRSVNASIRSVDTVVSEIAKASEQQSDGIEQVNAAIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QMDEVTQRNAALVEESAAASASLREQAEHMGKLVGRFVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]