| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83721522
Identifier: 83721522
GI number: 83721522
Start: 2386454
End: 2387761
Strand: Direct
Name: 83721522
Synonym: BTH_I2114
Alternate gene names: NA
Gene position: 2386454-2387761 (Clockwise)
Preceding gene: 83719220
Following gene: 83718638
Centisome position: 62.65
GC content: 68.12
Gene sequence:
>1308_bases ATGACGCGGCGCAGCAGTGCGTCGACACCGTTCAAATGGATGGGGCATTCGTGCTTTCTCGCACGGGCGGTTTTCAAAAA AGCCGACGGCTATAATCGATCGCTCAACGAAGCAATCGAAGCGCGCACGGCCGGCGGCGAGCGGGCAAGGGAGCGGTCAG TGGTGGCGATCAGAGGGGAGGGGCGGCAGGACATCGATGCGTTGCGCGACGTGCCGGCGGCGATCGTGCTCGACGAAGCC GCTTGGCCGCCGCTCGCGCCGCGCCGGCGGGATTTCGACGGATGCACGCAGACGCCCGGCTCGACGTCGCGCGAGCTGAG CCTGTTCCTGCTCGATCTGTACGCGGTCGCGAACCGCGCGTCGATCGGCGAGTTCGAATGCCGCTTCTTTCAGCTGCTGT CGCGCTATCTGCCGTTCGATGCCGGCTGGACGGGCGTCGCGAATCACACGCCGGCCGGCCCGGTGATGCACAACAGCTAT CTGTGCCGGTTGCCGCACGAGTTCTTCGCCGACTGGAAACGCGTGCGCGATTGCGATCCGCTCGCGCACCGGACCTTGCA TGGCGCATACGGCCGGGCCGCGATCCTGTCCGTCGTCGAGCCGGGGCTCGACGCGCGCTTTCGCGACTGGTGCGTCAAGT ACGGGCTCGCGCAACTGATGTGCGTATGCACGCTCGACCGGCGTTTCGGACTCACGACGTTCCTGTCGATCTACCGGCAG GCCTTGAATCGTCCGTTTACCGAAGAAGACGCGCGCCGCTACGAAGACGTGATCCCGCATCTCGCGGCCGCGCTCACGAT CAATCGCGCCGCGCAGCTCACGCGGCTGCGCAGCGAGGCGGCCGCATCGACGGTGCGCGCGATCTGCGACAACTTCGGCG TACTGCATCACGCGGACGCCGGCTTCGGCGCGGTGTTGCGCACCGAGTGGCCGGACTGGGCCGGCTCGCGGCTGCCTTCC GCGCTCGTCGAGCACTTGCGCCGCCACGCATCGCAGCCGTATTCGGGCGATGCGCTGCGCATGCAGTGCGTGAGCGTCGC CGGACTGTTCCGGCTCGAGGTGCGGCCCCGCTCGCTGCTCGATCGCCTGAGCCCGCGCGAGCTCGCGGCGATCCGCTATT ACGGCGAAGGGCGCTCGCACAAGGAGGTCGCGCAGCAGATGGCGATCTCGCCCGCCACCGTGCGCCACTATCTGCGCTGC GCGTATCGCAAGCTCGGGATGCACGACAAGAGCCAGATCTCGGGCGTGCTCGGCGAGCTCGATCGCGCCGCCGAAGGCAT CGGCGCGGCGCGCGGCATCGACGAGTGA
Upstream 100 bases:
>100_bases GCTGCAAAGCCGTCCAGATGAACGGTGAGGGAAACCCTCGGGGAATCCCGAGGGCCGCCGCGCCGCGGCGCGCGCGGGCG GCCGACGCGCGGCGGCGGCG
Downstream 100 bases:
>100_bases CGGGCGGCCCGCACGGCCAGATGGTTGTGTGCGCAACTATTTGGCTCTATGCTCATCGCTTCATCTAACGAGGAGAAGTG CATATGGATCGGGCACCGGT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; GerE Family Transcriptional Regulator; Transcriptional Regulator; Response Regulator; LuxR Superfamily Regulatory Protein; Regulatory Protein LuxR
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MTRRSSASTPFKWMGHSCFLARAVFKKADGYNRSLNEAIEARTAGGERARERSVVAIRGEGRQDIDALRDVPAAIVLDEA AWPPLAPRRRDFDGCTQTPGSTSRELSLFLLDLYAVANRASIGEFECRFFQLLSRYLPFDAGWTGVANHTPAGPVMHNSY LCRLPHEFFADWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDARFRDWCVKYGLAQLMCVCTLDRRFGLTTFLSIYRQ ALNRPFTEEDARRYEDVIPHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGVLHHADAGFGAVLRTEWPDWAGSRLPS ALVEHLRRHASQPYSGDALRMQCVSVAGLFRLEVRPRSLLDRLSPRELAAIRYYGEGRSHKEVAQQMAISPATVRHYLRC AYRKLGMHDKSQISGVLGELDRAAEGIGAARGIDE
Sequences:
>Translated_435_residues MTRRSSASTPFKWMGHSCFLARAVFKKADGYNRSLNEAIEARTAGGERARERSVVAIRGEGRQDIDALRDVPAAIVLDEA AWPPLAPRRRDFDGCTQTPGSTSRELSLFLLDLYAVANRASIGEFECRFFQLLSRYLPFDAGWTGVANHTPAGPVMHNSY LCRLPHEFFADWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDARFRDWCVKYGLAQLMCVCTLDRRFGLTTFLSIYRQ ALNRPFTEEDARRYEDVIPHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGVLHHADAGFGAVLRTEWPDWAGSRLPS ALVEHLRRHASQPYSGDALRMQCVSVAGLFRLEVRPRSLLDRLSPRELAAIRYYGEGRSHKEVAQQMAISPATVRHYLRC AYRKLGMHDKSQISGVLGELDRAAEGIGAARGIDE >Mature_434_residues TRRSSASTPFKWMGHSCFLARAVFKKADGYNRSLNEAIEARTAGGERARERSVVAIRGEGRQDIDALRDVPAAIVLDEAA WPPLAPRRRDFDGCTQTPGSTSRELSLFLLDLYAVANRASIGEFECRFFQLLSRYLPFDAGWTGVANHTPAGPVMHNSYL CRLPHEFFADWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDARFRDWCVKYGLAQLMCVCTLDRRFGLTTFLSIYRQA LNRPFTEEDARRYEDVIPHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGVLHHADAGFGAVLRTEWPDWAGSRLPSA LVEHLRRHASQPYSGDALRMQCVSVAGLFRLEVRPRSLLDRLSPRELAAIRYYGEGRSHKEVAQQMAISPATVRHYLRCA YRKLGMHDKSQISGVLGELDRAAEGIGAARGIDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48613; Mature: 48482
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRSSASTPFKWMGHSCFLARAVFKKADGYNRSLNEAIEARTAGGERARERSVVAIRGE CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHCCEEEEECC GRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGCTQTPGSTSRELSLFLLDLYAVANRA CCHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC SIGEFECRFFQLLSRYLPFDAGWTGVANHTPAGPVMHNSYLCRLPHEFFADWKRVRDCDP CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCH LAHRTLHGAYGRAAILSVVEPGLDARFRDWCVKYGLAQLMCVCTLDRRFGLTTFLSIYRQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ALNRPFTEEDARRYEDVIPHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGVLHHADA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GFGAVLRTEWPDWAGSRLPSALVEHLRRHASQPYSGDALRMQCVSVAGLFRLEVRPRSLL CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCHHHHH DRLSPRELAAIRYYGEGRSHKEVAQQMAISPATVRHYLRCAYRKLGMHDKSQISGVLGEL HCCCHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DRAAEGIGAARGIDE HHHHHHHHHHCCCCC >Mature Secondary Structure TRRSSASTPFKWMGHSCFLARAVFKKADGYNRSLNEAIEARTAGGERARERSVVAIRGE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHCCEEEEECC GRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGCTQTPGSTSRELSLFLLDLYAVANRA CCHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC SIGEFECRFFQLLSRYLPFDAGWTGVANHTPAGPVMHNSYLCRLPHEFFADWKRVRDCDP CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCH LAHRTLHGAYGRAAILSVVEPGLDARFRDWCVKYGLAQLMCVCTLDRRFGLTTFLSIYRQ HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ALNRPFTEEDARRYEDVIPHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGVLHHADA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GFGAVLRTEWPDWAGSRLPSALVEHLRRHASQPYSGDALRMQCVSVAGLFRLEVRPRSLL CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCHHHHH DRLSPRELAAIRYYGEGRSHKEVAQQMAISPATVRHYLRCAYRKLGMHDKSQISGVLGEL HCCCHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DRAAEGIGAARGIDE HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA