| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is pgk [H]
Identifier: 83721516
GI number: 83721516
Start: 760275
End: 761468
Strand: Direct
Name: pgk [H]
Synonym: BTH_I0663
Alternate gene names: 83721516
Gene position: 760275-761468 (Clockwise)
Preceding gene: 83719146
Following gene: 284159404
Centisome position: 19.96
GC content: 68.34
Gene sequence:
>1194_bases ATGAGCCAAGTAAAGCGTCTTACCGACCTGATCGCCGAAGGCAAGCTCTCCGGCAAACGTGTGTTCATCCGCGCCGATCT GAACGTGCCGCAGGACGATCACGGCAACATCACCGAAGACACGCGCGTGCGCGCGTCGGTGCCCGCGATCCAGGCGGCGC TCGACGCGGGCGCGGCCGTGATGGTCACGTCGCACCTCGGCCGCCCGACGGAAGGCGAGTTCACGCCCGAGGATTCGCTC GCGCCCGTCGCGAAGCGCCTCGCCGAGCTGCTCGGCCGCGACGTGCCGCTCGTCGCGAACTGGGTCGAGAACGGCGTCGA GGTTGCGCCCGGGCAGGTCGTGCTGCTCGAGAACTGCCGCGTGAACAAGGGCGAGAAGAAGAACTCGGACGAGCTCGCGC AGAAGATGGCGAAGCTCTGCGACGTCTACGTGAACGACGCGTTCGGCACCGCGCACCGCGCGGAGGCGACCACGCACGGC ATCGCGAAGTACGCCCCCGTCGCGTGCGCGGGCCCGCTGCTCGCCGCGGAGCTCGACGCGCTCGGCAAGGCGCTCGGCAA CCCGAAGCGCCCGCTGGTGGCGATCGTCGCGGGCTCGAAGGTGTCGACGAAGCTGACGATCCTGAAGTCGCTCGCGGAGA AGGTCGATCAACTGATCGTCGGCGGCGGCATCGCGAACACGTTCATGCTCGCGGCGGGCCTCGCGATCGGCAAGTCGCTC GCGGAGGCCGATCTCGTCGGCGAGGCGAAGGCGATCATCGACGAAGCCCGCAAGCGCGGCGCGTCGGTGCCGATCCCGAC CGACGTCGTCGTCGCGAAGGAATTCTCGCCGACGGCCGTCGCCACCGTGAAGAAGGTCGCCGACATCGAAGCCGACGACA TGATCCTCGACATCGGGCCGGAAACCGCGAAGGCGCTCGCCGGCCAGCTCGAGAAGGCGGGCACGATCGTCTGGAACGGC CCCGTCGGCGTGTTCGAGTTCGACCAGTTCGGCAACGGCACGAAGACGCTCGCCGACGCGATCGCGAATTCGGCCGCGTT CTCGATCGCGGGCGGCGGCGACACGCTCGCCGCGATCGCGAAGTACGGGATTCACGACAAGGTCAGCTACATCTCGACGG GCGGCGGCGCGTTCCTCGAATTCCTCGAGGGCAAGAAGCTGCCCGCCGTCGAAGTGCTGGAAACGCGCGCGTAA
Upstream 100 bases:
>100_bases CGCGGGCCCTGCCGCGCGAAGCCGGCGGGCCGCGCGAGGCGCCCGGCGCGGCAGCCCGCGCGCGTCGAACCGCCTTCCTT CATCAACCTTCATCAGTCCC
Downstream 100 bases:
>100_bases GCACGCGACATCGCGCGCGGCCGCGAGCAGGTGCCGGCGGCGCGCGATAAACGCGGGCGGCAGCCGCCCGCGTGACGCCG GCGGGCACGCGCGTTGCGCG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSQVKRLTDLIAEGKLSGKRVFIRADLNVPQDDHGNITEDTRVRASVPAIQAALDAGAAVMVTSHLGRPTEGEFTPEDSL APVAKRLAELLGRDVPLVANWVENGVEVAPGQVVLLENCRVNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHG IAKYAPVACAGPLLAAELDALGKALGNPKRPLVAIVAGSKVSTKLTILKSLAEKVDQLIVGGGIANTFMLAAGLAIGKSL AEADLVGEAKAIIDEARKRGASVPIPTDVVVAKEFSPTAVATVKKVADIEADDMILDIGPETAKALAGQLEKAGTIVWNG PVGVFEFDQFGNGTKTLADAIANSAAFSIAGGGDTLAAIAKYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLETRA
Sequences:
>Translated_397_residues MSQVKRLTDLIAEGKLSGKRVFIRADLNVPQDDHGNITEDTRVRASVPAIQAALDAGAAVMVTSHLGRPTEGEFTPEDSL APVAKRLAELLGRDVPLVANWVENGVEVAPGQVVLLENCRVNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHG IAKYAPVACAGPLLAAELDALGKALGNPKRPLVAIVAGSKVSTKLTILKSLAEKVDQLIVGGGIANTFMLAAGLAIGKSL AEADLVGEAKAIIDEARKRGASVPIPTDVVVAKEFSPTAVATVKKVADIEADDMILDIGPETAKALAGQLEKAGTIVWNG PVGVFEFDQFGNGTKTLADAIANSAAFSIAGGGDTLAAIAKYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLETRA >Mature_396_residues SQVKRLTDLIAEGKLSGKRVFIRADLNVPQDDHGNITEDTRVRASVPAIQAALDAGAAVMVTSHLGRPTEGEFTPEDSLA PVAKRLAELLGRDVPLVANWVENGVEVAPGQVVLLENCRVNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGI AKYAPVACAGPLLAAELDALGKALGNPKRPLVAIVAGSKVSTKLTILKSLAEKVDQLIVGGGIANTFMLAAGLAIGKSLA EADLVGEAKAIIDEARKRGASVPIPTDVVVAKEFSPTAVATVKKVADIEADDMILDIGPETAKALAGQLEKAGTIVWNGP VGVFEFDQFGNGTKTLADAIANSAAFSIAGGGDTLAAIAKYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLETRA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=423, Percent_Identity=42.5531914893617, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI4505763, Length=421, Percent_Identity=40.3800475059382, Blast_Score=273, Evalue=3e-73, Organism=Escherichia coli, GI1789294, Length=397, Percent_Identity=63.727959697733, Blast_Score=473, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17508823, Length=419, Percent_Identity=43.436754176611, Blast_Score=300, Evalue=7e-82, Organism=Saccharomyces cerevisiae, GI6319857, Length=408, Percent_Identity=43.3823529411765, Blast_Score=283, Evalue=4e-77, Organism=Drosophila melanogaster, GI17136394, Length=406, Percent_Identity=40.3940886699507, Blast_Score=255, Evalue=3e-68, Organism=Drosophila melanogaster, GI24581203, Length=421, Percent_Identity=38.2422802850356, Blast_Score=245, Evalue=3e-65,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41245; Mature: 41114
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVKRLTDLIAEGKLSGKRVFIRADLNVPQDDHGNITEDTRVRASVPAIQAALDAGAAV CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE MVTSHLGRPTEGEFTPEDSLAPVAKRLAELLGRDVPLVANWVENGVEVAPGQVVLLENCR EEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEECCCCEEEEECCC VNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIAKYAPVACAGPLLAAELDA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHH LGKALGNPKRPLVAIVAGSKVSTKLTILKSLAEKVDQLIVGGGIANTFMLAAGLAIGKSL HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AEADLVGEAKAIIDEARKRGASVPIPTDVVVAKEFSPTAVATVKKVADIEADDMILDIGP HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEECCC ETAKALAGQLEKAGTIVWNGPVGVFEFDQFGNGTKTLADAIANSAAFSIAGGGDTLAAIA HHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH KYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLETRA HHCCCCCHHEEECCCHHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure SQVKRLTDLIAEGKLSGKRVFIRADLNVPQDDHGNITEDTRVRASVPAIQAALDAGAAV CHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE MVTSHLGRPTEGEFTPEDSLAPVAKRLAELLGRDVPLVANWVENGVEVAPGQVVLLENCR EEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCEECCCCEEEEECCC VNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIAKYAPVACAGPLLAAELDA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHH LGKALGNPKRPLVAIVAGSKVSTKLTILKSLAEKVDQLIVGGGIANTFMLAAGLAIGKSL HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AEADLVGEAKAIIDEARKRGASVPIPTDVVVAKEFSPTAVATVKKVADIEADDMILDIGP HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEECCC ETAKALAGQLEKAGTIVWNGPVGVFEFDQFGNGTKTLADAIANSAAFSIAGGGDTLAAIA HHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH KYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLETRA HHCCCCCHHEEECCCHHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]