| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721418
Identifier: 83721418
GI number: 83721418
Start: 3656433
End: 3658778
Strand: Direct
Name: 83721418
Synonym: BTH_I3210
Alternate gene names: NA
Gene position: 3656433-3658778 (Clockwise)
Preceding gene: 83720551
Following gene: 83721517
Centisome position: 95.99
GC content: 67.31
Gene sequence:
>2346_bases ATGATGCCCCTGTCCGAACCGATTGCCACCAACACACTCACGCCCGAACAGCAGTTCGAGCAGGATATCGCGCTGATCAT GCAAAGCGCGCTCGAACGTCACCACAAGGGCGAGCACGACGATGCGCAAGCGCTGTACGAGGCCATCATCGGCGCGAAGG CCGATCATGCCGACGCGAACTACAATCTCGCGGTGCTGAAAGCGCAGACCCGGCGAGCGCAGGAAGCGCTGCCGCACTTC GAGATCGCGCTCGGCGCAAATCCGAACAACGGCCAATATTGGGTCAGCTACATCAACGCGCTGCACCAGAGCGGGCTCAC GCCGGCCGCGTGGGTCGCGGTGGAGCTCGCGCAGCAGCGCGGCGTCCGAGGCCCGGCGCTGGACGGCCTGATCGCGCAGA TGGCCACGCCGCATATCACGCTGGCGACCGCCGCCGCCGCGCCCGGGCCGGCAGGCACGATCAACCTCATTGCGGGCGAC GCGGCGCCGAACGCCACGGTTGTCTCCAGCACGGCGCCCGCTGACGCGCGCAAGGCCGACCAGTCGAGACTCGCGAAGCA CGCCGCGCTGTTCAACAAGGGGCTGCTCGACAAGGCGATCGCGTGCGCGCGCGAGCTGGTCGAGGCCTTTCCTTACGACG GCGCATGCTGGCGCGCGCTGGCGGTATCGCTGTACCGGGCGCGCCAGCTCGACGACACGATCGCGTCGGCATCCCGCGCG CTCGAGCTCCTGCCCGACGATTTGGTGACGCGCATACTGCTCGTCGACGTGCTGCGAATCACGAAGCGCCTGCCCGAAGC CGAGACCCAATCCCGCCGGCTCATCGAAATGAAGCCGGACAACGCCGAGGCCCACCGGATGCTCGGCCTCGTGCTGCACG CGCAGCGCCGCTATGAGGAAGCGGTCGCCGCTTGCCGCCGCGCGGTCGAGCTGGCGCCGAACGCGGCGCCAGCCAACGGC ACGCTCGGCGTCGTCCTGCTCGAACAAGGCAATGTGCACGAGGCGATCGGCCGCTTGCGTCGCGCAGTCGAGATCGATCC GACCGATAGCGTCACGCACAGCGCCATGCTGTTCGCACTGGTCCACGACGACGCGGTCGATCCCGCGCAACTCCTCGAAG AGCATCGAGTGTTCGGCCGGCGGCACGAAGCGCGTGTGACGGTGAAACCGCATGCGAATTCGCGCGATCCGGCGCGCCAG CTCAAGGTCGGCATCATCTCGGGCGACCTGTTGGCGCATGCGGTCGCGGCGTACCTGCAGCCCGTCATCGACCATCTGGC CGACGACCCGACCCTGTCGCTGCACATCTACTACAACTATCTGGTCGAGGATCAGATCACCGCGCAGCTGCGCGAGAAGG TGCCGGCGTGGGACAACGTGACGAACGTCAGCGACGCCGACCTGATCGAGAAGATCCGCCGTGACCGGATCGACATCATG ATCGACTTGTCCGGCCATACGGGCCGCAACCGCCTCGTCGCGCTCGCGCACAAGCCCGCGCCGATCCAGGCGTCGTGGAT CGGCTACCCGGCCACGACCGGGCTCAAGGCGATCGACTACTACCTGAGCGACAGCGTCATCACGCCGCCGGGCGAAATGG ATGACCACTTCATCGAGAAGATCGTGCGAATGCCGGCGCTCGCGCCGTACCTGCCGCCGCCGCACTGCCCGCCCGTCAAC GGCTTGCCGGCGCTGCGCAACGGCTACGTCACATACGGCAGCTTCAACCGCCTCAACAAGCTTAGACAGAACGTGATCGC GCTGTGGTCGCAAGTGTTGCTCGCGACGCCGAGCGCGAGGATGGTCATCGGCTCGATCGAACAGGAAGGAGATCGCGAGA CGATCATCGAATGGTTCGTCTCCGAAGGCATCGATGCGCACCGCCTGACGTTCCAGCCGCGCGCGGCCATGCCGGTGTAT CTGCAGCAGCATCATCACGTCGACGTCTGCCTGGACGCCTTCCCGTACGCCGGTTCGACGACGACGCTCAACGCGCTGTG GATGGGCGTGCCGACCGTCACGCTGTCCGGCAAGTCGATCCCGAGCCGCGGTTCGGCAAGCTGGCTGAGCCACGTCGGCC TGGCGGAGTACATCGCGCACGACCAGAAATCCTTCGTGCGCACGAGCATCGCCGCCGCGCAAGATCTCGACGCGCTGAAC CGGCTGCGGCTCGGCATGCGCGAACGCTGCCTCGCCTCCGCGCCGTTCCAGCCGAACACCGTCGCGCGGGGCCTGTCGGC GGCGCTGCGGATGATGTGGAAGCGCTGGTGCGAAGGCCTCTCGCCGGCCGCCTTCGAGGTCGAACTCGACCGGCCCTCGG CCGACACCACCGCATCGCCCGTCTGA
Upstream 100 bases:
>100_bases CCGCAATTGGCCAAATTGGCTGTCCTTTTGGCGTCACCTCGCAGCTTCGACGGCCGGGAACGCCGCCCATAATGGCTCGG ACTGATTCGTCTCGACCATC
Downstream 100 bases:
>100_bases TCGATTCGAGACGCAACGCACCGCGAGAACACGTCATGGACAAGCTCATACCCGTCACGCAGCCGTACATGCCACCGCTC GACGAATTCCTGCCGTACCT
Product: TPR domain-containing protein
Products: NA
Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Methyltransferase Type; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Repeat Protein; TPR Domain Protein; FkbM Family Methyltransferase; Tetratricopeptide Repeat-Containing Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Glycosyl Transferase Family Protein; Tpr Repeat-Containing Protein; Porphyrin Biosynthesis Protein; Transferase; Tetratricopeptide Repeat Family Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; TPR Domain/SEC-C Motif Domain Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase; Glycosyltransferase TPR Domain-Containing Protein; Methyltransferase Regulatory Domain; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; TPR Repeat-Containing Glycosyl Transferase; O-Linked GLCNAC Transferase; Glycosyl Transferase TPR Repeat Protein; Glycosyl Transferase; TPR Repeat-Containing SPINDLY Family Protein
Number of amino acids: Translated: 781; Mature: 781
Protein sequence:
>781_residues MMPLSEPIATNTLTPEQQFEQDIALIMQSALERHHKGEHDDAQALYEAIIGAKADHADANYNLAVLKAQTRRAQEALPHF EIALGANPNNGQYWVSYINALHQSGLTPAAWVAVELAQQRGVRGPALDGLIAQMATPHITLATAAAAPGPAGTINLIAGD AAPNATVVSSTAPADARKADQSRLAKHAALFNKGLLDKAIACARELVEAFPYDGACWRALAVSLYRARQLDDTIASASRA LELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHAQRRYEEAVAACRRAVELAPNAAPANG TLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVTHSAMLFALVHDDAVDPAQLLEEHRVFGRRHEARVTVKPHANSRDPARQ LKVGIISGDLLAHAVAAYLQPVIDHLADDPTLSLHIYYNYLVEDQITAQLREKVPAWDNVTNVSDADLIEKIRRDRIDIM IDLSGHTGRNRLVALAHKPAPIQASWIGYPATTGLKAIDYYLSDSVITPPGEMDDHFIEKIVRMPALAPYLPPPHCPPVN GLPALRNGYVTYGSFNRLNKLRQNVIALWSQVLLATPSARMVIGSIEQEGDRETIIEWFVSEGIDAHRLTFQPRAAMPVY LQQHHHVDVCLDAFPYAGSTTTLNALWMGVPTVTLSGKSIPSRGSASWLSHVGLAEYIAHDQKSFVRTSIAAAQDLDALN RLRLGMRERCLASAPFQPNTVARGLSAALRMMWKRWCEGLSPAAFEVELDRPSADTTASPV
Sequences:
>Translated_781_residues MMPLSEPIATNTLTPEQQFEQDIALIMQSALERHHKGEHDDAQALYEAIIGAKADHADANYNLAVLKAQTRRAQEALPHF EIALGANPNNGQYWVSYINALHQSGLTPAAWVAVELAQQRGVRGPALDGLIAQMATPHITLATAAAAPGPAGTINLIAGD AAPNATVVSSTAPADARKADQSRLAKHAALFNKGLLDKAIACARELVEAFPYDGACWRALAVSLYRARQLDDTIASASRA LELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHAQRRYEEAVAACRRAVELAPNAAPANG TLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVTHSAMLFALVHDDAVDPAQLLEEHRVFGRRHEARVTVKPHANSRDPARQ LKVGIISGDLLAHAVAAYLQPVIDHLADDPTLSLHIYYNYLVEDQITAQLREKVPAWDNVTNVSDADLIEKIRRDRIDIM IDLSGHTGRNRLVALAHKPAPIQASWIGYPATTGLKAIDYYLSDSVITPPGEMDDHFIEKIVRMPALAPYLPPPHCPPVN GLPALRNGYVTYGSFNRLNKLRQNVIALWSQVLLATPSARMVIGSIEQEGDRETIIEWFVSEGIDAHRLTFQPRAAMPVY LQQHHHVDVCLDAFPYAGSTTTLNALWMGVPTVTLSGKSIPSRGSASWLSHVGLAEYIAHDQKSFVRTSIAAAQDLDALN RLRLGMRERCLASAPFQPNTVARGLSAALRMMWKRWCEGLSPAAFEVELDRPSADTTASPV >Mature_781_residues MMPLSEPIATNTLTPEQQFEQDIALIMQSALERHHKGEHDDAQALYEAIIGAKADHADANYNLAVLKAQTRRAQEALPHF EIALGANPNNGQYWVSYINALHQSGLTPAAWVAVELAQQRGVRGPALDGLIAQMATPHITLATAAAAPGPAGTINLIAGD AAPNATVVSSTAPADARKADQSRLAKHAALFNKGLLDKAIACARELVEAFPYDGACWRALAVSLYRARQLDDTIASASRA LELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHAQRRYEEAVAACRRAVELAPNAAPANG TLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVTHSAMLFALVHDDAVDPAQLLEEHRVFGRRHEARVTVKPHANSRDPARQ LKVGIISGDLLAHAVAAYLQPVIDHLADDPTLSLHIYYNYLVEDQITAQLREKVPAWDNVTNVSDADLIEKIRRDRIDIM IDLSGHTGRNRLVALAHKPAPIQASWIGYPATTGLKAIDYYLSDSVITPPGEMDDHFIEKIVRMPALAPYLPPPHCPPVN GLPALRNGYVTYGSFNRLNKLRQNVIALWSQVLLATPSARMVIGSIEQEGDRETIIEWFVSEGIDAHRLTFQPRAAMPVY LQQHHHVDVCLDAFPYAGSTTTLNALWMGVPTVTLSGKSIPSRGSASWLSHVGLAEYIAHDQKSFVRTSIAAAQDLDALN RLRLGMRERCLASAPFQPNTVARGLSAALRMMWKRWCEGLSPAAFEVELDRPSADTTASPV
Specific function: Unknown
COG id: COG3914
COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307148, Length=558, Percent_Identity=24.910394265233, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI32307150, Length=558, Percent_Identity=24.910394265233, Blast_Score=99, Evalue=1e-20, Organism=Caenorhabditis elegans, GI115532690, Length=559, Percent_Identity=24.1502683363148, Blast_Score=93, Evalue=5e-19, Organism=Caenorhabditis elegans, GI115532692, Length=559, Percent_Identity=24.1502683363148, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI17647755, Length=365, Percent_Identity=26.8493150684932, Blast_Score=100, Evalue=7e-21, Organism=Drosophila melanogaster, GI24585827, Length=365, Percent_Identity=26.8493150684932, Blast_Score=100, Evalue=7e-21, Organism=Drosophila melanogaster, GI24585829, Length=365, Percent_Identity=26.8493150684932, Blast_Score=100, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85392; Mature: 85392
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPLSEPIATNTLTPEQQFEQDIALIMQSALERHHKGEHDDAQALYEAIIGAKADHADAN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC YNLAVLKAQTRRAQEALPHFEIALGANPNNGQYWVSYINALHQSGLTPAAWVAVELAQQR CCEEEEEHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHC GVRGPALDGLIAQMATPHITLATAAAAPGPAGTINLIAGDAAPNATVVSSTAPADARKAD CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHH QSRLAKHAALFNKGLLDKAIACARELVEAFPYDGACWRALAVSLYRARQLDDTIASASRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHAQRRYEE HHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH AVAACRRAVELAPNAAPANGTLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVTHSAMLFAL HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHH VHDDAVDPAQLLEEHRVFGRRHEARVTVKPHANSRDPARQLKVGIISGDLLAHAVAAYLQ HCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHEEEEECHHHHHHHHHHHHH PVIDHLADDPTLSLHIYYNYLVEDQITAQLREKVPAWDNVTNVSDADLIEKIRRDRIDIM HHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEE IDLSGHTGRNRLVALAHKPAPIQASWIGYPATTGLKAIDYYLSDSVITPPGEMDDHFIEK EEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHHH IVRMPALAPYLPPPHCPPVNGLPALRNGYVTYGSFNRLNKLRQNVIALWSQVLLATPSAR HHHCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHH MVIGSIEQEGDRETIIEWFVSEGIDAHRLTFQPRAAMPVYLQQHHHVDVCLDAFPYAGST EEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCEEHHHCCCCCCCC TTLNALWMGVPTVTLSGKSIPSRGSASWLSHVGLAEYIAHDQKSFVRTSIAAAQDLDALN CCHHHHEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRLGMRERCLASAPFQPNTVARGLSAALRMMWKRWCEGLSPAAFEVELDRPSADTTASP HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC V C >Mature Secondary Structure MMPLSEPIATNTLTPEQQFEQDIALIMQSALERHHKGEHDDAQALYEAIIGAKADHADAN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC YNLAVLKAQTRRAQEALPHFEIALGANPNNGQYWVSYINALHQSGLTPAAWVAVELAQQR CCEEEEEHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHC GVRGPALDGLIAQMATPHITLATAAAAPGPAGTINLIAGDAAPNATVVSSTAPADARKAD CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHH QSRLAKHAALFNKGLLDKAIACARELVEAFPYDGACWRALAVSLYRARQLDDTIASASRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHAQRRYEE HHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH AVAACRRAVELAPNAAPANGTLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVTHSAMLFAL HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHH VHDDAVDPAQLLEEHRVFGRRHEARVTVKPHANSRDPARQLKVGIISGDLLAHAVAAYLQ HCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHEEEEECHHHHHHHHHHHHH PVIDHLADDPTLSLHIYYNYLVEDQITAQLREKVPAWDNVTNVSDADLIEKIRRDRIDIM HHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEE IDLSGHTGRNRLVALAHKPAPIQASWIGYPATTGLKAIDYYLSDSVITPPGEMDDHFIEK EEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHHH IVRMPALAPYLPPPHCPPVNGLPALRNGYVTYGSFNRLNKLRQNVIALWSQVLLATPSAR HHHCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHH MVIGSIEQEGDRETIIEWFVSEGIDAHRLTFQPRAAMPVYLQQHHHVDVCLDAFPYAGST EEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCCEEHHHCCCCCCCC TTLNALWMGVPTVTLSGKSIPSRGSASWLSHVGLAEYIAHDQKSFVRTSIAAAQDLDALN CCHHHHEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRLGMRERCLASAPFQPNTVARGLSAALRMMWKRWCEGLSPAAFEVELDRPSADTTASP HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA