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The map label for this gene is rutD [H]

Identifier: 83720551

GI number: 83720551

Start: 3652823

End: 3653638

Strand: Direct

Name: rutD [H]

Synonym: BTH_I3207

Alternate gene names: 83720551

Gene position: 3652823-3653638 (Clockwise)

Preceding gene: 83720421

Following gene: 83721418

Centisome position: 95.89

GC content: 66.54

Gene sequence:

>816_bases
ATGCCTTTCGTCACTATCGATGGCCAACCCCTGCACTATCAGATCAGGGGCTCCGGCGCGCCCGTGCTGTTCGGGCACAG
CTACCTGTGGGATTCGTCGATGTGGGAGCCGCAGCTCGAAGCGCTCTCGAAGTCGTATCGCGTGATCGCGCCGGACCTGT
GGGGGCACGGCCAATCCGGCCCGCTGCCCGACGGCACGAACGATCTCGACGATCTGGCGATGCAGATGTGCGTGCTCCTC
GATCATCTCGGCATCGACACCTGCTCGATCGTCGGGCTGTCGGTGGGCGGCATGTGGGCGGTGCCGCTCGCGCACCGCGC
GCCGCAGCGGATCGACCGTCTCGTGCTGATGGACACCTATGTCGGCATCGAGCCCGACGCGACACGCAACAAGTATTTCC
AGATGCTCGCGGCCATCGACGCGCAAGGCGCGATCCCCGCGCCGCTGCTCGACGCGATCGTGCCGATCTTCTTCCGCCCC
GGCATCGATCTCGCGAGCGAGCTGCCTGCGGGCTTCCGGCGCGCGCTGCAGGCGTTCACGACCGAGAGGCTGCGCGACTC
GGTGATTCCGCTCGGCAAGATCACGTTTGGCCGCGAAGACGCACGCGCGAAACTCAGCGCGCTGCCGGCCCAGCGCACGC
TCGTGATGTGCGGCGCGAACGACGTCGCGCGGCCCCCCGAGGAAGCCGACGAAATCGCAACGCTGATCGGCTGCGAAAAG
GTGTTCGTGCCGAACGCCGGGCACATTTCGAATCTCGAGAACCCGGCGTTCGTGACGCAGGCGTTGATCGATTGGCTCGG
ACGCGGCAGCAACTGA

Upstream 100 bases:

>100_bases
GCAATCGCTGCCGATTACCGCAGACTGCTTCGGCATGCGCATTGATTGCGCGCTTACCCGAACTCCGTAAACCGATTCAC
TACCAAGCGACCTTATCGAC

Downstream 100 bases:

>100_bases
ACCGCGAACGCCGCCACGTCGAAAGGGCCGCTGCGCGCGCGGCGCTTTGCGCTTTCGGAACGCCGATCGGAACAGCTTAC
CTATCGCGACAGACAAGAGC

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MPFVTIDGQPLHYQIRGSGAPVLFGHSYLWDSSMWEPQLEALSKSYRVIAPDLWGHGQSGPLPDGTNDLDDLAMQMCVLL
DHLGIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTYVGIEPDATRNKYFQMLAAIDAQGAIPAPLLDAIVPIFFRP
GIDLASELPAGFRRALQAFTTERLRDSVIPLGKITFGREDARAKLSALPAQRTLVMCGANDVARPPEEADEIATLIGCEK
VFVPNAGHISNLENPAFVTQALIDWLGRGSN

Sequences:

>Translated_271_residues
MPFVTIDGQPLHYQIRGSGAPVLFGHSYLWDSSMWEPQLEALSKSYRVIAPDLWGHGQSGPLPDGTNDLDDLAMQMCVLL
DHLGIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTYVGIEPDATRNKYFQMLAAIDAQGAIPAPLLDAIVPIFFRP
GIDLASELPAGFRRALQAFTTERLRDSVIPLGKITFGREDARAKLSALPAQRTLVMCGANDVARPPEEADEIATLIGCEK
VFVPNAGHISNLENPAFVTQALIDWLGRGSN
>Mature_270_residues
PFVTIDGQPLHYQIRGSGAPVLFGHSYLWDSSMWEPQLEALSKSYRVIAPDLWGHGQSGPLPDGTNDLDDLAMQMCVLLD
HLGIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTYVGIEPDATRNKYFQMLAAIDAQGAIPAPLLDAIVPIFFRPG
IDLASELPAGFRRALQAFTTERLRDSVIPLGKITFGREDARAKLSALPAQRTLVMCGANDVARPPEEADEIATLIGCEKV
FVPNAGHISNLENPAFVTQALIDWLGRGSN

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29467; Mature: 29336

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFVTIDGQPLHYQIRGSGAPVLFGHSYLWDSSMWEPQLEALSKSYRVIAPDLWGHGQSG
CCEEEECCCCEEEEEECCCCCEEECCHHHCCCCCCCHHHHHHHCCCEEEECHHCCCCCCC
PLPDGTNDLDDLAMQMCVLLDHLGIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTY
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEECCCCEEECHHHHCCHHHHHHHHHHHHH
VGIEPDATRNKYFQMLAAIDAQGAIPAPLLDAIVPIFFRPGIDLASELPAGFRRALQAFT
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHH
TERLRDSVIPLGKITFGREDARAKLSALPAQRTLVMCGANDVARPPEEADEIATLIGCEK
HHHHHHHCCCCCCEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC
VFVPNAGHISNLENPAFVTQALIDWLGRGSN
EECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFVTIDGQPLHYQIRGSGAPVLFGHSYLWDSSMWEPQLEALSKSYRVIAPDLWGHGQSG
CEEEECCCCEEEEEECCCCCEEECCHHHCCCCCCCHHHHHHHCCCEEEECHHCCCCCCC
PLPDGTNDLDDLAMQMCVLLDHLGIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTY
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEEECCCCEEECHHHHCCHHHHHHHHHHHHH
VGIEPDATRNKYFQMLAAIDAQGAIPAPLLDAIVPIFFRPGIDLASELPAGFRRALQAFT
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHH
TERLRDSVIPLGKITFGREDARAKLSALPAQRTLVMCGANDVARPPEEADEIATLIGCEK
HHHHHHHCCCCCCEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC
VFVPNAGHISNLENPAFVTQALIDWLGRGSN
EECCCCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA