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The map label for this gene is yraN [C]

Identifier: 83721376

GI number: 83721376

Start: 3591526

End: 3592008

Strand: Reverse

Name: yraN [C]

Synonym: BTH_I3148

Alternate gene names: 83721376

Gene position: 3592008-3591526 (Counterclockwise)

Preceding gene: 83720801

Following gene: 83719738

Centisome position: 94.3

GC content: 72.88

Gene sequence:

>483_bases
ATGACACGAAAGGCGCCCGCACGCGGCGCAAACGGAACAAGCCCAGCATTGTGCCACGCACGCGCGGCGCGGCAGGCAAC
GGGCGAGGCCGAAGCGGCGCCGCGCGACAACTTTTCGAAGGCGGCCGGGTCCAAGCGCGTCGTCGGCGCTGCGTTCGAGA
CGCGCGCGCAGCGCTTTCTCGAGCGCGCGGGACTCGCGCCCGTCGCGCGCAACGTGACCGTGCGCGGCGGCGAAATCGAC
CTCGTGATGCGCGAGCGCGACGGCACGCTCGTGTTCGTCGAAGTGCGCGCGCGCACGAGCGGCCGCTACGGCGGCGCGGC
GGCGAGCATCGGCGCGCGCAAGCGCATGCGGCTCCTGCACGCGGCGCATCTGTTCTGGGCGCGAATGGGCGGCGCGAGCG
CGTGCCGCTTCGACGTCGTCGCCTTCGAAGGCGGCCGGCTCGTGTGGCTGCGCGATGCGTTTCGCGCCGACGAAACAGCC
TAG

Upstream 100 bases:

>100_bases
GCGCAGCGTGATGTCGGCGGCGTTGCCGATCGGCGTCGCGACGACGTAGAGGGCGCCCGTCGGGTATTGCTGCGCCTGCG
CGAGATCGAGGAGGGAAGTC

Downstream 100 bases:

>100_bases
CTTGTGTCGAGATGTAAGGAGATGCGGCGACGCTCTGGCGGCGGGGGCGGAGTGCGGTAAACTCGCCGCACTCACGATGC
CGCGCGACGCAGGCCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTRKAPARGANGTSPALCHARAARQATGEAEAAPRDNFSKAAGSKRVVGAAFETRAQRFLERAGLAPVARNVTVRGGEID
LVMRERDGTLVFVEVRARTSGRYGGAAASIGARKRMRLLHAAHLFWARMGGASACRFDVVAFEGGRLVWLRDAFRADETA

Sequences:

>Translated_160_residues
MTRKAPARGANGTSPALCHARAARQATGEAEAAPRDNFSKAAGSKRVVGAAFETRAQRFLERAGLAPVARNVTVRGGEID
LVMRERDGTLVFVEVRARTSGRYGGAAASIGARKRMRLLHAAHLFWARMGGASACRFDVVAFEGGRLVWLRDAFRADETA
>Mature_159_residues
TRKAPARGANGTSPALCHARAARQATGEAEAAPRDNFSKAAGSKRVVGAAFETRAQRFLERAGLAPVARNVTVRGGEIDL
VMRERDGTLVFVEVRARTSGRYGGAAASIGARKRMRLLHAAHLFWARMGGASACRFDVVAFEGGRLVWLRDAFRADETA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=114, Percent_Identity=50.8771929824561, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 17169; Mature: 17038

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKAPARGANGTSPALCHARAARQATGEAEAAPRDNFSKAAGSKRVVGAAFETRAQRFL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHH
ERAGLAPVARNVTVRGGEIDLVMRERDGTLVFVEVRARTSGRYGGAAASIGARKRMRLLH
HHCCCCCHHCCEEEECCEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
AAHLFWARMGGASACRFDVVAFEGGRLVWLRDAFRADETA
HHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
TRKAPARGANGTSPALCHARAARQATGEAEAAPRDNFSKAAGSKRVVGAAFETRAQRFL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHH
ERAGLAPVARNVTVRGGEIDLVMRERDGTLVFVEVRARTSGRYGGAAASIGARKRMRLLH
HHCCCCCHHCCEEEECCEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
AAHLFWARMGGASACRFDVVAFEGGRLVWLRDAFRADETA
HHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA