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The map label for this gene is rlpA [C]

Identifier: 83720801

GI number: 83720801

Start: 3592989

End: 3593624

Strand: Reverse

Name: rlpA [C]

Synonym: BTH_I3150

Alternate gene names: 83720801

Gene position: 3593624-3592989 (Counterclockwise)

Preceding gene: 83720388

Following gene: 83721376

Centisome position: 94.34

GC content: 66.51

Gene sequence:

>636_bases
ATGAGATTTCGATTACCGAGGCATCTCGGGACTTTAGCTGTATTCTTCGCGCTGACAGGCTGCGCGGTGCCGCCGAACGC
ACCGACTTCCGAACAGGCGAAAGGCGCCGCGTCGAAGGACGCGCTGCGCACGGCCGCGTCGGGCGCGGCCAACAACAATA
AGGAATCGGCGGGTGCGCCGCTGAACTTCGACACGGCACTCGCGTCGATGCCCGCCGCCGGCTCGCAGGACGCATCGCGC
CAATCGCTCGCGAACGCGAAGCCGATCGACGCCGCGGACATCTCGGATTTCCGCCAGACCGGCCGCGCGTCGTGGTACGG
CAAGGGCTTTCACGGCCGCCGCACCGCGAACGGCGAACGCTTCAACATGAATGAACTCACGGCCGCGCACCGAACGCTGC
CGCTCGCGTCGTACGTGCGCGTGACGAACCAGGCGAACGGCAAGTCCGTCGTCGTGAAGATCAACGATCGCGGCCCGTTC
TCGCGCGGCCGAATCCTCGATCTGTCGTATGCGGCGGCGAAGGTGATCGGCCTCGTTCGCGCGGGCACCGCGCGCGTGAA
GATTCAGGGGCTGTCGCCTGAAGAGGCGCGCGTCGCGCGCGACGAGATGCTCGCGTCGAACAGCACGACGAAGTAA

Upstream 100 bases:

>100_bases
GCCAGATGCAAGCCGCCCGCGCGCGAGCGCGACTGGGGCATGCATGTCCGTCCGGATCGCATTCGTAGCGACGCGATCCG
TACAAGCAGGCGACACGTCG

Downstream 100 bases:

>100_bases
TCGCGACAAGGGCGCCGCGTCGGCCGCCCGGACGACGATCGAACGCATGCGAAAGGGCCGCTTCGTGCGGCCCTTTCGCT
TTTGCAGCGAATCCTTACTC

Product: rare lipoprotein A family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRFRLPRHLGTLAVFFALTGCAVPPNAPTSEQAKGAASKDALRTAASGAANNNKESAGAPLNFDTALASMPAAGSQDASR
QSLANAKPIDAADISDFRQTGRASWYGKGFHGRRTANGERFNMNELTAAHRTLPLASYVRVTNQANGKSVVVKINDRGPF
SRGRILDLSYAAAKVIGLVRAGTARVKIQGLSPEEARVARDEMLASNSTTK

Sequences:

>Translated_211_residues
MRFRLPRHLGTLAVFFALTGCAVPPNAPTSEQAKGAASKDALRTAASGAANNNKESAGAPLNFDTALASMPAAGSQDASR
QSLANAKPIDAADISDFRQTGRASWYGKGFHGRRTANGERFNMNELTAAHRTLPLASYVRVTNQANGKSVVVKINDRGPF
SRGRILDLSYAAAKVIGLVRAGTARVKIQGLSPEEARVARDEMLASNSTTK
>Mature_211_residues
MRFRLPRHLGTLAVFFALTGCAVPPNAPTSEQAKGAASKDALRTAASGAANNNKESAGAPLNFDTALASMPAAGSQDASR
QSLANAKPIDAADISDFRQTGRASWYGKGFHGRRTANGERFNMNELTAAHRTLPLASYVRVTNQANGKSVVVKINDRGPF
SRGRILDLSYAAAKVIGLVRAGTARVKIQGLSPEEARVARDEMLASNSTTK

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=81, Percent_Identity=51.8518518518518, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 22297; Mature: 22297

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRLPRHLGTLAVFFALTGCAVPPNAPTSEQAKGAASKDALRTAASGAANNNKESAGAP
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
LNFDTALASMPAAGSQDASRQSLANAKPIDAADISDFRQTGRASWYGKGFHGRRTANGER
CCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
FNMNELTAAHRTLPLASYVRVTNQANGKSVVVKINDRGPFSRGRILDLSYAAAKVIGLVR
ECHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHH
AGTARVKIQGLSPEEARVARDEMLASNSTTK
CCCEEEEEECCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFRLPRHLGTLAVFFALTGCAVPPNAPTSEQAKGAASKDALRTAASGAANNNKESAGAP
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
LNFDTALASMPAAGSQDASRQSLANAKPIDAADISDFRQTGRASWYGKGFHGRRTANGER
CCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
FNMNELTAAHRTLPLASYVRVTNQANGKSVVVKINDRGPFSRGRILDLSYAAAKVIGLVR
ECHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHH
AGTARVKIQGLSPEEARVARDEMLASNSTTK
CCCEEEEEECCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]