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The map label for this gene is gpsA [H]

Identifier: 83721337

GI number: 83721337

Start: 465712

End: 466719

Strand: Direct

Name: gpsA [H]

Synonym: BTH_I0420

Alternate gene names: 83721337

Gene position: 465712-466719 (Clockwise)

Preceding gene: 83718724

Following gene: 83720630

Centisome position: 12.23

GC content: 74.7

Gene sequence:

>1008_bases
GTGCTGAGCATGAAAGTCGCTGTTCTCGGCGCCGGCGCGTGGGGCACCGCGCTCGCGGCGCATCTCGCCGCGCGGCACGA
CACGCTGCTCTGGGCGCGCGACGCGGCGCTCGTCGCCGAGCTTGCCGCGCGGCGCGAGAACGTCCGCTACCTGGACGGCG
TCGCGCTGCCGCCCGCATTGCGCTACGAGGCCGATCTCACGGCGGCGCTGTCGCACGCGCAGGCGGACGACGCGCTCTGC
GTGATCGCCGCGCCCGTGGCCGGCTTGCGCGCGCTGTGCCGCGCGATGCGCGATGCGGGCCGCGTGCCCGCCCACTTCGT
GTGGGTCTGCAAGGGCTTCGAGGCCGACACGCGGCTGCTGCCGCATCAGATGGTCGCCGAGGAACTGCCGGATCACGCGA
GCTACGGCGTGCTGTCGGGCCCGAGCTTCGCGCGCGAAGTCGCGCAGGGGCTGCCCGTCGCGCTGACGGTTGCGAGCGCG
TCGGCCGCATGCCGCGGGCGCACGCTCGCCGCGTTCCATCACGGCGCGATGCGCATCTATACGGGCGACGACGTCGTCGG
CGTCGAGGTCGGCGGCGCGGTGAAGAACGTGCTTGCGATCGCGACGGGCATCGCCGACGGCTTGGGCCTCGGCCTCAACG
CGCGCGCGGCGCTCGTTACGCGCGGGCTCGCGGAGATGTCGCGTCTGGGCGTCGCGCTCGGCGGCCGCGCGGAGACGTTC
ACGGGCCTCACGGGCCTGGGCGACCTGATCCTCACGGCGACGGGCGATCTGTCGCGCAACCGGACCGTCGGCCTGCAGCT
CGCGGCCGGCCGCTCGCTCGACGACATTCTGGCCGCGCTCGGCCACGTGGCCGAAGGCGTGCGGTGCGCGCGCGCGGTGC
TGTCGATCGCGCGCGAGCGCGGCGTCGACATGCCGATCACCGAGGCGGTATGCGCGGTGCTGTTCGACGGCGTCGCGCCG
CGCGACGCGGTGAGCGGCCTGCTGCGGCGGGACGCGAAGGCCGAATAG

Upstream 100 bases:

>100_bases
AACTTCCAGGCGCTGTACGAGCAGCGCTTGGCCGAGATCGCGCAGCAGCAAGGCGGCGCGCCGAACGGCACGACGCTGAA
CTGAGTATGAACGACGACCG

Downstream 100 bases:

>100_bases
GGTCCGTCGAGCCGGATCGAATCCAATCCGAATCGAACGAACGCGGGCGCGCTGCGCGGCGCGCCCGCGTTCGCGCGTTC
AGTGCGACCGGCGGCGCGTG

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MLSMKVAVLGAGAWGTALAAHLAARHDTLLWARDAALVAELAARRENVRYLDGVALPPALRYEADLTAALSHAQADDALC
VIAAPVAGLRALCRAMRDAGRVPAHFVWVCKGFEADTRLLPHQMVAEELPDHASYGVLSGPSFAREVAQGLPVALTVASA
SAACRGRTLAAFHHGAMRIYTGDDVVGVEVGGAVKNVLAIATGIADGLGLGLNARAALVTRGLAEMSRLGVALGGRAETF
TGLTGLGDLILTATGDLSRNRTVGLQLAAGRSLDDILAALGHVAEGVRCARAVLSIARERGVDMPITEAVCAVLFDGVAP
RDAVSGLLRRDAKAE

Sequences:

>Translated_335_residues
MLSMKVAVLGAGAWGTALAAHLAARHDTLLWARDAALVAELAARRENVRYLDGVALPPALRYEADLTAALSHAQADDALC
VIAAPVAGLRALCRAMRDAGRVPAHFVWVCKGFEADTRLLPHQMVAEELPDHASYGVLSGPSFAREVAQGLPVALTVASA
SAACRGRTLAAFHHGAMRIYTGDDVVGVEVGGAVKNVLAIATGIADGLGLGLNARAALVTRGLAEMSRLGVALGGRAETF
TGLTGLGDLILTATGDLSRNRTVGLQLAAGRSLDDILAALGHVAEGVRCARAVLSIARERGVDMPITEAVCAVLFDGVAP
RDAVSGLLRRDAKAE
>Mature_335_residues
MLSMKVAVLGAGAWGTALAAHLAARHDTLLWARDAALVAELAARRENVRYLDGVALPPALRYEADLTAALSHAQADDALC
VIAAPVAGLRALCRAMRDAGRVPAHFVWVCKGFEADTRLLPHQMVAEELPDHASYGVLSGPSFAREVAQGLPVALTVASA
SAACRGRTLAAFHHGAMRIYTGDDVVGVEVGGAVKNVLAIATGIADGLGLGLNARAALVTRGLAEMSRLGVALGGRAETF
TGLTGLGDLILTATGDLSRNRTVGLQLAAGRSLDDILAALGHVAEGVRCARAVLSIARERGVDMPITEAVCAVLFDGVAP
RDAVSGLLRRDAKAE

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=342, Percent_Identity=28.9473684210526, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI24307999, Length=349, Percent_Identity=26.647564469914, Blast_Score=87, Evalue=3e-17,
Organism=Escherichia coli, GI1790037, Length=332, Percent_Identity=43.0722891566265, Blast_Score=240, Evalue=8e-65,
Organism=Caenorhabditis elegans, GI32564399, Length=355, Percent_Identity=28.169014084507, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI32564403, Length=361, Percent_Identity=27.4238227146814, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI193210136, Length=361, Percent_Identity=27.4238227146814, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17507425, Length=282, Percent_Identity=26.5957446808511, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193210134, Length=215, Percent_Identity=31.6279069767442, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320181, Length=354, Percent_Identity=29.6610169491525, Blast_Score=103, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6324513, Length=354, Percent_Identity=28.5310734463277, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281362270, Length=303, Percent_Identity=29.042904290429, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI45551945, Length=303, Percent_Identity=29.042904290429, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI17136200, Length=347, Percent_Identity=27.0893371757925, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17136204, Length=348, Percent_Identity=27.0114942528736, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17136202, Length=347, Percent_Identity=27.0893371757925, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24648969, Length=259, Percent_Identity=29.7297297297297, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI22026922, Length=330, Percent_Identity=23.6363636363636, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 34567; Mature: 34567

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMKVAVLGAGAWGTALAAHLAARHDTLLWARDAALVAELAARRENVRYLDGVALPPAL
CCCEEEEEEECCHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHCCCHHHCCCCCCCCH
RYEADLTAALSHAQADDALCVIAAPVAGLRALCRAMRDAGRVPAHFVWVCKGFEADTRLL
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHC
PHQMVAEELPDHASYGVLSGPSFAREVAQGLPVALTVASASAACRGRTLAAFHHGAMRIY
HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHCCCEEEEEECCEEEEE
TGDDVVGVEVGGAVKNVLAIATGIADGLGLGLNARAALVTRGLAEMSRLGVALGGRAETF
ECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
TGLTGLGDLILTATGDLSRNRTVGLQLAAGRSLDDILAALGHVAEGVRCARAVLSIARER
HCHHHHCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVDMPITEAVCAVLFDGVAPRDAVSGLLRRDAKAE
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLSMKVAVLGAGAWGTALAAHLAARHDTLLWARDAALVAELAARRENVRYLDGVALPPAL
CCCEEEEEEECCHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHCCCHHHCCCCCCCCH
RYEADLTAALSHAQADDALCVIAAPVAGLRALCRAMRDAGRVPAHFVWVCKGFEADTRLL
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHC
PHQMVAEELPDHASYGVLSGPSFAREVAQGLPVALTVASASAACRGRTLAAFHHGAMRIY
HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHCCCEEEEEECCEEEEE
TGDDVVGVEVGGAVKNVLAIATGIADGLGLGLNARAALVTRGLAEMSRLGVALGGRAETF
ECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
TGLTGLGDLILTATGDLSRNRTVGLQLAAGRSLDDILAALGHVAEGVRCARAVLSIARER
HCHHHHCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVDMPITEAVCAVLFDGVAPRDAVSGLLRRDAKAE
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA