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The map label for this gene is yngJ [H]

Identifier: 83721306

GI number: 83721306

Start: 436720

End: 437931

Strand: Direct

Name: yngJ [H]

Synonym: BTH_I0394

Alternate gene names: 83721306

Gene position: 436720-437931 (Clockwise)

Preceding gene: 83721254

Following gene: 83718417

Centisome position: 11.46

GC content: 67.74

Gene sequence:

>1212_bases
ATGGATCTCAATTTCACCGCTGAAGAGGAAGCGTTCCGCGCGCAGGTGCAGCGCTTTCTCGCCGACGAGCTGCCGCCGCG
CATTTCGCGCAAGGTGAAGGGCGGCTTGCGGCTCACGCGCGACGACATGCGCGAATGGCACGCCATCCTCAACGCGCGGG
GCTGGCTCGCGAGCCACTGGCCGCGCGAATGGGGCGGCCCCGGCTGGAGCGTCGCGCAGAAGTTCCTGTTCGACAACGAG
TGCGCGATCGCGGGCGCGCCGCGCATCGTGCCGTTCGGCGTGAACATGCTCGGCCCCGTGCTGATCAGGTACGGCAGCGA
AGCGCAGAAGCGCCGCTGGCTGCCGCGCATTCTCGACGGCACCGACTGGTGGTGCCAGGGCTATTCGGAGCCGGGCGCGG
GCTCCGATCTCGCCGCGGTGAAAACGAGCGCGGTGCGGGGCGTCGACGCGCAGGGCGACCACTACGTCGTCAACGGGCAG
AAGACGTGGACGACGCTCGGGCACTACGCGAACATGATCTTCTGCCTCGTGCGCACCGCGACCGACGTGCGCAAGCAGGA
AGGCATCAGCTTCCTGCTCGTCGACATGAACGCGCCCGGCGTCGAGGTGCGCCCGATCGTCACGCTCGACGGCGAGCACG
AAGTCAACGAAGTGTTCTTCACCGACGTGCGCGTGCCGGCCGAAAACCTCGTCGGCGAAGAGAACCGCGGCTGGACCTAC
GCGAAATACCTGCTCACGTACGAGCGCACGAACATCGCGGGCGTGGGCTTCTCGGTCGCGGCGCTGGACAGGCTGCGCGC
GGTCGCGGCGAAGGTGAAGAGGAACGGCCGGCCGCTCGCCGACGATCCGCTCTTCGCCGCGCGGCTCGCTCGCGTCGAGA
TCGAGCTCGACAACATGAAGACGACGAACCTGCGCGTGCTCGCGGCCGTCGCGGGCGGCGGCGCGCCGGGCGCGGAGAGC
TCGATGCTGAAGATTCGCGGCACGCAGATCCGCCAGGAGATTTCGTCGCTGATGCGTCGCGCGATGGGGCCGTATGCGCA
GCCGTTCGTCGACGAGGCGCTCGACGCCGATTACGACGGCGAGCCGTTGGGCGGCCTGCCCGAGGCGGCGAGCGCCGCGA
CGCAATACTTCAACAACCGCAAGCTGTCGATCTTCGGCGGCTCGAACGAGATCCAGAAGAACATCATCTCGAAGACGATG
CTCGGGTTGTAA

Upstream 100 bases:

>100_bases
CGTCGCGCGCGGCGAGACCTTCGCGAGCCTGAACCGCATCGACTGACGCCGCGCCCGGTCGCCCGCCGGTTGCCCTACAC
GTATTCGAGAACGACGTCAC

Downstream 100 bases:

>100_bases
GGACGATCCATGGACTTTCGATACACCGAAGACCGCCGGATGCTGGCGGACAGCCTGAACCGCTTCATCGCCGAGCAGTA
CCCGTTCGCCGCGCGCGACC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHWPREWGGPGWSVAQKFLFDNE
CAIAGAPRIVPFGVNMLGPVLIRYGSEAQKRRWLPRILDGTDWWCQGYSEPGAGSDLAAVKTSAVRGVDAQGDHYVVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLVDMNAPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENLVGEENRGWTY
AKYLLTYERTNIAGVGFSVAALDRLRAVAAKVKRNGRPLADDPLFAARLARVEIELDNMKTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEISSLMRRAMGPYAQPFVDEALDADYDGEPLGGLPEAASAATQYFNNRKLSIFGGSNEIQKNIISKTM
LGL

Sequences:

>Translated_403_residues
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHWPREWGGPGWSVAQKFLFDNE
CAIAGAPRIVPFGVNMLGPVLIRYGSEAQKRRWLPRILDGTDWWCQGYSEPGAGSDLAAVKTSAVRGVDAQGDHYVVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLVDMNAPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENLVGEENRGWTY
AKYLLTYERTNIAGVGFSVAALDRLRAVAAKVKRNGRPLADDPLFAARLARVEIELDNMKTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEISSLMRRAMGPYAQPFVDEALDADYDGEPLGGLPEAASAATQYFNNRKLSIFGGSNEIQKNIISKTM
LGL
>Mature_403_residues
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHWPREWGGPGWSVAQKFLFDNE
CAIAGAPRIVPFGVNMLGPVLIRYGSEAQKRRWLPRILDGTDWWCQGYSEPGAGSDLAAVKTSAVRGVDAQGDHYVVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLVDMNAPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENLVGEENRGWTY
AKYLLTYERTNIAGVGFSVAALDRLRAVAAKVKRNGRPLADDPLFAARLARVEIELDNMKTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEISSLMRRAMGPYAQPFVDEALDADYDGEPLGGLPEAASAATQYFNNRKLSIFGGSNEIQKNIISKTM
LGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=267, Percent_Identity=28.8389513108614, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI187960098, Length=312, Percent_Identity=27.5641025641026, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI4557231, Length=312, Percent_Identity=27.5641025641026, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI211971008, Length=342, Percent_Identity=28.0701754385965, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI48976061, Length=342, Percent_Identity=28.0701754385965, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI4501859, Length=405, Percent_Identity=26.6666666666667, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI226958414, Length=234, Percent_Identity=30.3418803418803, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI4501857, Length=405, Percent_Identity=24.1975308641975, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI4557233, Length=408, Percent_Identity=27.9411764705882, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI21361497, Length=407, Percent_Identity=23.5872235872236, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4557235, Length=178, Percent_Identity=32.0224719101124, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI76496475, Length=178, Percent_Identity=32.0224719101124, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI38505218, Length=239, Percent_Identity=30.5439330543933, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI7656849, Length=315, Percent_Identity=26.3492063492064, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI87081958, Length=311, Percent_Identity=26.6881028938907, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1786223, Length=329, Percent_Identity=23.7082066869301, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17570075, Length=415, Percent_Identity=26.5060240963855, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=408, Percent_Identity=24.5098039215686, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=313, Percent_Identity=27.4760383386581, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=362, Percent_Identity=27.3480662983425, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=346, Percent_Identity=26.3005780346821, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=239, Percent_Identity=30.1255230125523, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=412, Percent_Identity=24.2718446601942, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17505929, Length=214, Percent_Identity=30.8411214953271, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=252, Percent_Identity=26.5873015873016, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=203, Percent_Identity=31.0344827586207, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=203, Percent_Identity=31.0344827586207, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=266, Percent_Identity=24.812030075188, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=305, Percent_Identity=25.2459016393443, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355753, Length=267, Percent_Identity=29.2134831460674, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24660351, Length=416, Percent_Identity=25.7211538461538, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21356377, Length=363, Percent_Identity=26.7217630853994, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281363737, Length=207, Percent_Identity=28.9855072463768, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24666513, Length=295, Percent_Identity=27.1186440677966, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24646207, Length=362, Percent_Identity=25.9668508287293, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44523; Mature: 44523

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREWGGPGWSVAQKFLFDNECAIAGAPRIVPFGVNMLGPVLIRYGSEAQKRRWLPRILDG
CHHHCCCCHHHHHHHHCCCCCEECCCCEEEEECHHHHHHHHHHCCCHHHHHHCCHHHHCC
TDWWCQGYSEPGAGSDLAAVKTSAVRGVDAQGDHYVVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLVDMNAPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENLVGEENRGWTY
HHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCEEE
AKYLLTYERTNIAGVGFSVAALDRLRAVAAKVKRNGRPLADDPLFAARLARVEIELDNMK
EHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCC
TTNLRVLAAVAGGGAPGAESSMLKIRGTQIRQEISSLMRRAMGPYAQPFVDEALDADYDG
CCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
EPLGGLPEAASAATQYFNNRKLSIFGGSNEIQKNIISKTMLGL
CCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREWGGPGWSVAQKFLFDNECAIAGAPRIVPFGVNMLGPVLIRYGSEAQKRRWLPRILDG
CHHHCCCCHHHHHHHHCCCCCEECCCCEEEEECHHHHHHHHHHCCCHHHHHHCCHHHHCC
TDWWCQGYSEPGAGSDLAAVKTSAVRGVDAQGDHYVVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLVDMNAPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENLVGEENRGWTY
HHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCEEE
AKYLLTYERTNIAGVGFSVAALDRLRAVAAKVKRNGRPLADDPLFAARLARVEIELDNMK
EHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCC
TTNLRVLAAVAGGGAPGAESSMLKIRGTQIRQEISSLMRRAMGPYAQPFVDEALDADYDG
CCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
EPLGGLPEAASAATQYFNNRKLSIFGGSNEIQKNIISKTMLGL
CCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]