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The map label for this gene is yngJ [H]

Identifier: 83718417

GI number: 83718417

Start: 437941

End: 439071

Strand: Direct

Name: yngJ [H]

Synonym: BTH_I0395

Alternate gene names: 83718417

Gene position: 437941-439071 (Clockwise)

Preceding gene: 83721306

Following gene: 83719905

Centisome position: 11.5

GC content: 73.03

Gene sequence:

>1131_bases
ATGGACTTTCGATACACCGAAGACCGCCGGATGCTGGCGGACAGCCTGAACCGCTTCATCGCCGAGCAGTACCCGTTCGC
CGCGCGCGACCGGATCGCGCTCTCCGAGCCCGGCTACAGCGACGACATGTGGCGGCGCTTCGCCGAGCTGGGCGCGATCG
GCGCGCTCTTCCCCGAGGACTGCGGCGGCCTCGGCGGCGCGGGCTTCGACATCGCGCTCGTGTTCGAGTGCCTCGGCCGC
GGGCTCGTCGTCGAGCCGTTCGCGGGCGCGCTGATGACCGGGCGCGCGCTCGCGCAGGCGGGCGGCGACGCGCACCGCGC
GCGGCTCGCCGATCTGATCGAAGGCCGTGCGATCGGTGCGTTCGCGCATGCGGAGCCCGGCACGCATTACGAACCGTACA
CGGTGAGAACGCGCGCGGCTCGCGAAGGCGGGCGCTGGGTGCTTGACGGAGCGAAGGCCGTCGTCGATTGCGGCGAGCAC
GCGACGTTCTTCGTCGTCAGCGCGCGCACCGCCGGCGCCGACGACGCCGCCGCGGGCCTGTCGCTCTTCGTCGTGCCGAA
GACGGCGCCGGGCGTGACGGCGCGCGGCTACCGGAAGATCGACGGCGGCCGCGCGGCCGACGTGCGCTTCGAGCGCGTCG
CGCTGGCCGACGACGCGCTCGTCGGCGCGCCGGGCGAAGCGGCCGACGCGATCGAGCGCGCGCTCGGCTTCGGCCTGCTC
GCGCTCGCGGCGGAGGCGCTTGGCGCGATGGACGTCGCGAAGGCGTACACGCTCGAGTATCTGCGCACCCGCCGCCAGTT
CGGCGTGCCGATCGGCAGCTTCCAGGCGCTGCAGCACCGGATGGCGGAGCTGCTGCTCGAGATCGAGCAGGCGCGCTCGG
CGGTGATCAACGCGGCCGCGCAGCTCGACGCGCCGCGCGTGGCGCGCGAGCGCGCGCTGTCCGCCGCCAAGTACAGCGTC
GGCCGGATCGGCGCGCTCGTCGCCGAGGAGAGCATCCAGCTGCACGGCGGGATCGGGATGACGTGGGAGCTGCCGCTCGC
GCACTACGCGAAACGGCTCGTGATGATCGATCACCAGCTCGGCGACGAGGATCACCACCTCGCGCGCTATGTCGCGCTGT
CGAAGCAATAG

Upstream 100 bases:

>100_bases
GCAATACTTCAACAACCGCAAGCTGTCGATCTTCGGCGGCTCGAACGAGATCCAGAAGAACATCATCTCGAAGACGATGC
TCGGGTTGTAAGGACGATCC

Downstream 100 bases:

>100_bases
CCGCCAACGAACGGAGGAGACGAAGATGCGCAACGAACCGGGCGCGCAGCCGCTCGCGGGTATCAAGGTGCTCGACTTCT
CGCGCGTGCTCGCCGGGCCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDFRYTEDRRMLADSLNRFIAEQYPFAARDRIALSEPGYSDDMWRRFAELGAIGALFPEDCGGLGGAGFDIALVFECLGR
GLVVEPFAGALMTGRALAQAGGDAHRARLADLIEGRAIGAFAHAEPGTHYEPYTVRTRAAREGGRWVLDGAKAVVDCGEH
ATFFVVSARTAGADDAAAGLSLFVVPKTAPGVTARGYRKIDGGRAADVRFERVALADDALVGAPGEAADAIERALGFGLL
ALAAEALGAMDVAKAYTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAAQLDAPRVARERALSAAKYSV
GRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYVALSKQ

Sequences:

>Translated_376_residues
MDFRYTEDRRMLADSLNRFIAEQYPFAARDRIALSEPGYSDDMWRRFAELGAIGALFPEDCGGLGGAGFDIALVFECLGR
GLVVEPFAGALMTGRALAQAGGDAHRARLADLIEGRAIGAFAHAEPGTHYEPYTVRTRAAREGGRWVLDGAKAVVDCGEH
ATFFVVSARTAGADDAAAGLSLFVVPKTAPGVTARGYRKIDGGRAADVRFERVALADDALVGAPGEAADAIERALGFGLL
ALAAEALGAMDVAKAYTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAAQLDAPRVARERALSAAKYSV
GRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYVALSKQ
>Mature_376_residues
MDFRYTEDRRMLADSLNRFIAEQYPFAARDRIALSEPGYSDDMWRRFAELGAIGALFPEDCGGLGGAGFDIALVFECLGR
GLVVEPFAGALMTGRALAQAGGDAHRARLADLIEGRAIGAFAHAEPGTHYEPYTVRTRAAREGGRWVLDGAKAVVDCGEH
ATFFVVSARTAGADDAAAGLSLFVVPKTAPGVTARGYRKIDGGRAADVRFERVALADDALVGAPGEAADAIERALGFGLL
ALAAEALGAMDVAKAYTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAAQLDAPRVARERALSAAKYSV
GRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYVALSKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=319, Percent_Identity=29.153605015674, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI226958412, Length=356, Percent_Identity=26.4044943820225, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4557233, Length=358, Percent_Identity=29.608938547486, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI4501859, Length=353, Percent_Identity=26.3456090651558, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI226958414, Length=320, Percent_Identity=27.1875, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI7656849, Length=316, Percent_Identity=26.8987341772152, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI187960098, Length=359, Percent_Identity=27.5766016713092, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI4557231, Length=359, Percent_Identity=27.5766016713092, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI4557235, Length=356, Percent_Identity=24.438202247191, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI76496475, Length=356, Percent_Identity=24.438202247191, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI21361497, Length=390, Percent_Identity=23.5897435897436, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI48976061, Length=331, Percent_Identity=25.9818731117825, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI211971008, Length=331, Percent_Identity=25.9818731117825, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081958, Length=347, Percent_Identity=23.6311239193084, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786223, Length=350, Percent_Identity=22.8571428571429, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=312, Percent_Identity=29.1666666666667, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI71985184, Length=318, Percent_Identity=31.1320754716981, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17534899, Length=311, Percent_Identity=29.2604501607717, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17570075, Length=367, Percent_Identity=28.6103542234332, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=353, Percent_Identity=26.3456090651558, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=312, Percent_Identity=25.9615384615385, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71985192, Length=329, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17569725, Length=360, Percent_Identity=26.3888888888889, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=28.4615384615385, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17533517, Length=335, Percent_Identity=24.4776119402985, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=348, Percent_Identity=26.4367816091954, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17505929, Length=360, Percent_Identity=26.3888888888889, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=243, Percent_Identity=24.2798353909465, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=23.6702127659574, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24666513, Length=354, Percent_Identity=24.5762711864407, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI21355753, Length=353, Percent_Identity=25.4957507082153, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21356377, Length=350, Percent_Identity=27.4285714285714, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24660351, Length=355, Percent_Identity=27.0422535211268, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24646207, Length=355, Percent_Identity=25.9154929577465, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI281363737, Length=347, Percent_Identity=24.4956772334294, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40305; Mature: 40305

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRYTEDRRMLADSLNRFIAEQYPFAARDRIALSEPGYSDDMWRRFAELGAIGALFPED
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCHH
CGGLGGAGFDIALVFECLGRGLVVEPFAGALMTGRALAQAGGDAHRARLADLIEGRAIGA
CCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE
FAHAEPGTHYEPYTVRTRAAREGGRWVLDGAKAVVDCGEHATFFVVSARTAGADDAAAGL
EECCCCCCCCCCEEEEHHHHCCCCCEEECCCHHHHHCCCCCEEEEEEECCCCCCCHHCCC
SLFVVPKTAPGVTARGYRKIDGGRAADVRFERVALADDALVGAPGEAADAIERALGFGLL
EEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
ALAAEALGAMDVAKAYTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDAPRVARERALSAAKYSVGRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHEEEHHC
GDEDHHLARYVALSKQ
CCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDFRYTEDRRMLADSLNRFIAEQYPFAARDRIALSEPGYSDDMWRRFAELGAIGALFPED
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCHH
CGGLGGAGFDIALVFECLGRGLVVEPFAGALMTGRALAQAGGDAHRARLADLIEGRAIGA
CCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE
FAHAEPGTHYEPYTVRTRAAREGGRWVLDGAKAVVDCGEHATFFVVSARTAGADDAAAGL
EECCCCCCCCCCEEEEHHHHCCCCCEEECCCHHHHHCCCCCEEEEEEECCCCCCCHHCCC
SLFVVPKTAPGVTARGYRKIDGGRAADVRFERVALADDALVGAPGEAADAIERALGFGLL
EEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
ALAAEALGAMDVAKAYTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDAPRVARERALSAAKYSVGRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHEEEHHC
GDEDHHLARYVALSKQ
CCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]