| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721217
Identifier: 83721217
GI number: 83721217
Start: 2898851
End: 2900089
Strand: Reverse
Name: 83721217
Synonym: BTH_I2541
Alternate gene names: NA
Gene position: 2900089-2898851 (Counterclockwise)
Preceding gene: 83718419
Following gene: 83720268
Centisome position: 76.13
GC content: 72.8
Gene sequence:
>1239_bases ATGAACGCGAGAACATTATCCTTGGCTGAGCCCGCCGTCACCGACTACTTCGTCTGCGCGTCGCCTCACGGCGAGCATGT GCGATGGCTCGCGCAGACGCTCGTTTCGGCCGGCGCGGTCGAGCCGGCGCCGCTCGAGCCGGCGGGGCTCGCGCAGCGGA TCGCCGGGCTCAATCCGGTGCTCGTCTTCGTCGATTTCTCGGGCGGCCACGCGCAGGCGGCGAGCGCCGCGGCGGCCGCG CTGCGCGTGTCGCATCCGGGGCTGCCCATCGTCGCGCTCGGCTCGCTCGGCGAGCCGGAAAGCGCGCTCGCGGCGCTGCG CGCGGGCGTGCGCGATTTCATCGACTTTTCCGCGCCCGCCGAGGACGCGCTCAGGATCACGCGCGGACTGCTCGATCACG TCGGCGATCAGCCGAGCCGCCACGGCCGGCTGATCGCGCTCCTCGGCGCGCGCGCCGGGATGGGCGCGAGCACGCTCGCC GCGAACCTGTCGGTGCTGGTGCAAAAACGCTCGGCGGCGCAGGGCCGCCAGACGGCGCTCGTCGATCTCGGGCTGCCGGC GGGCGACGGCGCGCTGTTCCTGAACACGCGCTGCGAATTCGATTTCGTCGAGGCGGTGCGCAACCTGCGCCGCTTCGACC GGACCTTCGTCAACACGGCGCTCGCGCGCCATTCGAGCGGCGTCGCGCTGACGTCGCTGCCGCCGAACCTGGCCGGGCTG CGCGACGTGTCCTACGCGTCGTGCGTCGGCCTGCTGAACCGCCTGCGCGCGTTCTTCGATTGCCAGATCGTCGACCTGGG CGGCTTCTCGAACCGCGATTTCGTCGCGCAGACCGCGAACGCGGCCGACGAGTCGTGGCTCCTGTGCGACCAGGGCGTCG CGTCCGTCGTGTCGGCCGTCGAGCTGCTCGAATCGCTGCGCGACGCGGGCGTGGACACGGACAACGTGCGCCTCGTCGTC AACCAGTACGATCCGGCGCTCGGCCTCGCGCCCGCGCAGATCGCCGAGCGCCTCGGGCTCGCGCTCGCCGCGACGCTGCC GTCGCGGCGCGTGCCGATCGGGCATGCGGCCAATCAGGGCAAGCTGATCGTCGACGTTGCCGAGCGCGACCCGTACGTGC GCGCGCTCGAGCCGCTCGTCGAACGCGCGACGGGCGGCGCGGGGGCCGCCGCGCCGCGCCCGGCGGGCGGCCTTTCCGCG CTCAGGCGCTTCATTCAACCCACCTCCAAGCGGTCGTAA
Upstream 100 bases:
>100_bases GTCGCCGGACGCGGGGCCGGGGTTCTCGAAATGAGCGCGCGAGGCCACGACGGCGCACGCGCGAGCGCCGCGACGCGGCG CGCAACCGGAATGCATCAAT
Downstream 100 bases:
>100_bases GAGATGGCACACGACATTCAATTTGCCGACGGGGCGACGCCGTTCTCGCAAACGCAGCAGTTTCACGACATCAAGAACGC CGCGCACGAGCATCTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like; Response Regulator Receiver Domain-Containing Protein; Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase; Response Receiver Involved In Pilum Assembly; Response Regulator; Flp Pilus Assembly ATPase; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Response Receiver ATPase CpaE; Flp Pilus Assembly ATPase CpaE; Response Regulator Receiver Domain Protein; Two-Component Response Regulator; Fimbriae Assembly Protein; Septum Site-Determining Protein; Chromosome Partitioning ATPase; Type II Secretion System Protein; AAA ATPase; Cobyrinic Acid Ac-Diamide Synthase; Pilus Assembly Protein CpaE-Like Protein; Pilus Assembly Protein CpaE-Like
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNARTLSLAEPAVTDYFVCASPHGEHVRWLAQTLVSAGAVEPAPLEPAGLAQRIAGLNPVLVFVDFSGGHAQAASAAAAA LRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPAEDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLA ANLSVLVQKRSAAQGRQTALVDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHSSGVALTSLPPNLAGL RDVSYASCVGLLNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAVELLESLRDAGVDTDNVRLVV NQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQGKLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSA LRRFIQPTSKRS
Sequences:
>Translated_412_residues MNARTLSLAEPAVTDYFVCASPHGEHVRWLAQTLVSAGAVEPAPLEPAGLAQRIAGLNPVLVFVDFSGGHAQAASAAAAA LRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPAEDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLA ANLSVLVQKRSAAQGRQTALVDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHSSGVALTSLPPNLAGL RDVSYASCVGLLNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAVELLESLRDAGVDTDNVRLVV NQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQGKLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSA LRRFIQPTSKRS >Mature_412_residues MNARTLSLAEPAVTDYFVCASPHGEHVRWLAQTLVSAGAVEPAPLEPAGLAQRIAGLNPVLVFVDFSGGHAQAASAAAAA LRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPAEDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLA ANLSVLVQKRSAAQGRQTALVDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHSSGVALTSLPPNLAGL RDVSYASCVGLLNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAVELLESLRDAGVDTDNVRLVV NQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQGKLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSA LRRFIQPTSKRS
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43022; Mature: 43022
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTLSLAEPAVTDYFVCASPHGEHVRWLAQTLVSAGAVEPAPLEPAGLAQRIAGLNPV CCCCEECCCCCCHHCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEE LVFVDFSGGHAQAASAAAAALRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPA EEEEECCCCCHHHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH EDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLAANLSVLVQKRSAAQGRQTAL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE VDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHSSGVALTSLPPNLAGL EEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC RDVSYASCVGLLNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAV CCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHH ELLESLRDAGVDTDNVRLVVNQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQG HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC KLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSALRRFIQPTSKRS CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNARTLSLAEPAVTDYFVCASPHGEHVRWLAQTLVSAGAVEPAPLEPAGLAQRIAGLNPV CCCCEECCCCCCHHCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEE LVFVDFSGGHAQAASAAAAALRVSHPGLPIVALGSLGEPESALAALRAGVRDFIDFSAPA EEEEECCCCCHHHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH EDALRITRGLLDHVGDQPSRHGRLIALLGARAGMGASTLAANLSVLVQKRSAAQGRQTAL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE VDLGLPAGDGALFLNTRCEFDFVEAVRNLRRFDRTFVNTALARHSSGVALTSLPPNLAGL EEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC RDVSYASCVGLLNRLRAFFDCQIVDLGGFSNRDFVAQTANAADESWLLCDQGVASVVSAV CCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHH ELLESLRDAGVDTDNVRLVVNQYDPALGLAPAQIAERLGLALAATLPSRRVPIGHAANQG HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC KLIVDVAERDPYVRALEPLVERATGGAGAAAPRPAGGLSALRRFIQPTSKRS CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA