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The map label for this gene is rfaQ [H]

Identifier: 83721186

GI number: 83721186

Start: 1127638

End: 1129014

Strand: Direct

Name: rfaQ [H]

Synonym: BTH_I0990

Alternate gene names: 83721186

Gene position: 1127638-1129014 (Clockwise)

Preceding gene: 83719240

Following gene: 83720681

Centisome position: 29.6

GC content: 68.7

Gene sequence:

>1377_bases
ATGTGCTGCGCGCGGCGCTGGTCGCGCACGCGTCGCGCAAGATCCAGTCGTTCGGCCCGCATGCGGCGAACGCGCGCATG
CAGGCGCTCGCCGCGCAATTGCTCGAGTCGGCTTGAGCGCGCCCGCGCCGCCAGGGCGCGCGGCGCGAATTCGCTAAAAT
GTCCAGTCGCTCTTCTTCATGCCTTCACCGTGACCGCTTCGTTGACGCTCCTCCGGCCGCCGCGCACCATCCTCGTGTCC
TGTACGCGCCGCCTCGGCGACGTGCTGCTGACGACGCCGCTCGTCCGCTCGCTGAAGGCGCGCTGGCCCGACGCGCAGAT
CGACATGATCGTGTTTCAGGGCACCGAAGGCGTGCTCGAGCACAATCCCGATATCCGCCGTGTGATCACGGTCGCGCAGC
GTGCGCGACCGAAAGAGCGCATTGCCGACGCGCTGCGCATTTGGCGCAAGTACGATCTCGCGTGCGCTGCGATCAGTTCC
GATCGCGCGCGCTTCTACGCGTTCTTCGCGGGTCGCAGGCGGATCGGGCTCGTCGATCCCGAGCGGCTCACGCGGCTCAC
GCGCTTCATCCTGAACGGTGTCGTGCTCGACGAGCATCGCGACGTCCATACTGTCACGAGCAATTTGTCGCTTGCCGGCG
CGCTCGGCGTGACGCCGTGCGCCGACGTCGTCGCGCCCGGTATCGGCGACGATCCCGCCGCACATGCGCGCTTCGATGCG
AAGCTGTACGGGACATCCGCGCTGCTGCGCGACGAGCCGTACGTCGTGTTGCATCCGTATCCGATGTTTCGCTACAAGCG
CTGGCGCGAGGACGGCTGGGTTGATCTCGTGCGCTGGGCGCGCAGCCGGGGGCTTGCGGTTGCGCTGAGCGGCGGTCCCG
CGCAGGCCGAGTGCGACTATGCGGCGCGGATCGCGCAAGCGGCGGGCGAGCCCGTGTTGAACATGGCAGGCAAACTGTCG
TTCGGCGAGAGCGCCGAGATGTTCCGGCGCGCGCGGCTCTTCATCGGCCCGGACACCGGCGCAACGCACGTTGCCGCTGC
CTGCGGCGTTCCGACGATCGCCCTCTTCGGGCCGTCGAATCCGACGCGCTGGGGCCCGTGGCCCGCGCATTGGCCGGCCG
GTAGCGAGCCGTGGCCGCTGCGAGGCTCGCAGCGGTGCGGCAACGTGTATTTGCTGCAGGGCGAAGGCGATTGCGTGCCG
TGCAAGCTCGAAGGTTGCGACCGCCATCTGGACAGCTGGAGTCGATGCCTGACCGAATTGCCGTCGGCCCGCGTGATCGG
CGCTGCGGCCGCGATGCTCGGACTCGATGCGGCGAGCGCGCAGACTACTGGCATTGCGATGTCGGTCGACGTCAGCCGGC
TCAAGGCGGGCAAGTAG

Upstream 100 bases:

>100_bases
GGGCCGCGCGATCAGCTCGACGGCGGCCGAGGCGGGCTGCTCGTGCCGCCCGGCGACGCGGACGCGCTCGCGGATGCGAT
CGAGCGCATGCTCTCTGACG

Downstream 100 bases:

>100_bases
GGCAGCGGCTCCCCGAATCAAACCGGTGCGTCGCAGTGTGCCGCGACGTCAGCGATGTGATTTGTTTCGCTGTGTGTGGA
CGATCGAGCGTCGGGCGGAT

Product: lipopolysaccharide core biosynthesis heptosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MCCARRWSRTRRARSSRSARMRRTRACRRSPRNCSSRLERARAARARGANSLKCPVALLHAFTVTASLTLLRPPRTILVS
CTRRLGDVLLTTPLVRSLKARWPDAQIDMIVFQGTEGVLEHNPDIRRVITVAQRARPKERIADALRIWRKYDLACAAISS
DRARFYAFFAGRRRIGLVDPERLTRLTRFILNGVVLDEHRDVHTVTSNLSLAGALGVTPCADVVAPGIGDDPAAHARFDA
KLYGTSALLRDEPYVVLHPYPMFRYKRWREDGWVDLVRWARSRGLAVALSGGPAQAECDYAARIAQAAGEPVLNMAGKLS
FGESAEMFRRARLFIGPDTGATHVAAACGVPTIALFGPSNPTRWGPWPAHWPAGSEPWPLRGSQRCGNVYLLQGEGDCVP
CKLEGCDRHLDSWSRCLTELPSARVIGAAAAMLGLDAASAQTTGIAMSVDVSRLKAGK

Sequences:

>Translated_458_residues
MCCARRWSRTRRARSSRSARMRRTRACRRSPRNCSSRLERARAARARGANSLKCPVALLHAFTVTASLTLLRPPRTILVS
CTRRLGDVLLTTPLVRSLKARWPDAQIDMIVFQGTEGVLEHNPDIRRVITVAQRARPKERIADALRIWRKYDLACAAISS
DRARFYAFFAGRRRIGLVDPERLTRLTRFILNGVVLDEHRDVHTVTSNLSLAGALGVTPCADVVAPGIGDDPAAHARFDA
KLYGTSALLRDEPYVVLHPYPMFRYKRWREDGWVDLVRWARSRGLAVALSGGPAQAECDYAARIAQAAGEPVLNMAGKLS
FGESAEMFRRARLFIGPDTGATHVAAACGVPTIALFGPSNPTRWGPWPAHWPAGSEPWPLRGSQRCGNVYLLQGEGDCVP
CKLEGCDRHLDSWSRCLTELPSARVIGAAAAMLGLDAASAQTTGIAMSVDVSRLKAGK
>Mature_458_residues
MCCARRWSRTRRARSSRSARMRRTRACRRSPRNCSSRLERARAARARGANSLKCPVALLHAFTVTASLTLLRPPRTILVS
CTRRLGDVLLTTPLVRSLKARWPDAQIDMIVFQGTEGVLEHNPDIRRVITVAQRARPKERIADALRIWRKYDLACAAISS
DRARFYAFFAGRRRIGLVDPERLTRLTRFILNGVVLDEHRDVHTVTSNLSLAGALGVTPCADVVAPGIGDDPAAHARFDA
KLYGTSALLRDEPYVVLHPYPMFRYKRWREDGWVDLVRWARSRGLAVALSGGPAQAECDYAARIAQAAGEPVLNMAGKLS
FGESAEMFRRARLFIGPDTGATHVAAACGVPTIALFGPSNPTRWGPWPAHWPAGSEPWPLRGSQRCGNVYLLQGEGDCVP
CKLEGCDRHLDSWSRCLTELPSARVIGAAAAMLGLDAASAQTTGIAMSVDVSRLKAGK

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=383, Percent_Identity=26.6318537859008, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 50354; Mature: 50354

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCCARRWSRTRRARSSRSARMRRTRACRRSPRNCSSRLERARAARARGANSLKCPVALLH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
AFTVTASLTLLRPPRTILVSCTRRLGDVLLTTPLVRSLKARWPDAQIDMIVFQGTEGVLE
HHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH
HNPDIRRVITVAQRARPKERIADALRIWRKYDLACAAISSDRARFYAFFAGRRRIGLVDP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEECCCCH
ERLTRLTRFILNGVVLDEHRDVHTVTSNLSLAGALGVTPCADVVAPGIGDDPAAHARFDA
HHHHHHHHHHHCCEEEECCCCHHHHHCCCEEECCCCCCCHHHHHCCCCCCCCCCCCEECE
KLYGTSALLRDEPYVVLHPYPMFRYKRWREDGWVDLVRWARSRGLAVALSGGPAQAECDY
EEECCHHEECCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHH
AARIAQAAGEPVLNMAGKLSFGESAEMFRRARLFIGPDTGATHVAAACGVPTIALFGPSN
HHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHCCCCEEEEECCCC
PTRWGPWPAHWPAGSEPWPLRGSQRCGNVYLLQGEGDCVPCKLEGCDRHLDSWSRCLTEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHC
PSARVIGAAAAMLGLDAASAQTTGIAMSVDVSRLKAGK
CCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCC
>Mature Secondary Structure
MCCARRWSRTRRARSSRSARMRRTRACRRSPRNCSSRLERARAARARGANSLKCPVALLH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
AFTVTASLTLLRPPRTILVSCTRRLGDVLLTTPLVRSLKARWPDAQIDMIVFQGTEGVLE
HHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH
HNPDIRRVITVAQRARPKERIADALRIWRKYDLACAAISSDRARFYAFFAGRRRIGLVDP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEECCCCH
ERLTRLTRFILNGVVLDEHRDVHTVTSNLSLAGALGVTPCADVVAPGIGDDPAAHARFDA
HHHHHHHHHHHCCEEEECCCCHHHHHCCCEEECCCCCCCHHHHHCCCCCCCCCCCCEECE
KLYGTSALLRDEPYVVLHPYPMFRYKRWREDGWVDLVRWARSRGLAVALSGGPAQAECDY
EEECCHHEECCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHH
AARIAQAAGEPVLNMAGKLSFGESAEMFRRARLFIGPDTGATHVAAACGVPTIALFGPSN
HHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHCCCCEEEEECCCC
PTRWGPWPAHWPAGSEPWPLRGSQRCGNVYLLQGEGDCVPCKLEGCDRHLDSWSRCLTEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHC
PSARVIGAAAAMLGLDAASAQTTGIAMSVDVSRLKAGK
CCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA